Hi, I cannot compile the package on Gentoo:Prefix and while studying how configure went I see some options are not exposed in teh ebuild, like support for R language. I wonder where the tlclsh and tcltk hide too. In the end, during linking the process fails as it looks for options associated with tcl. I assume the primary bug is somewhere in configure and teh downstream Makefiles the build could help disabling those options. graphviz-11.0.0 will be compiled with the following: options: cgraph: Yes (always enabled) digcola: Yes expat: Yes freetype: Yes glut: Yes ann: No (no ann.pc or ANN.h found) gts: No (disabled) ipsepcola: No (disabled) ltdl: Yes ortho: Yes sfdp: Yes swig: Yes ( 4.2.1 ) shared: Yes static: No (disabled by default) qt: Yes x: Yes commands: dot: Yes (always enabled) neato: Yes (always enabled) fdp: Yes (always enabled) circo: Yes (always enabled) twopi: Yes (always enabled) gvpr: Yes (always enabled) gvmap: Yes (always enabled) smyrna: No (disabled) gvedit: Yes plugin libraries: dot_layout: Yes (always enabled) neato_layout: Yes (always enabled) core: Yes (always enabled) devil: No (disabled) gd: Yes gdiplus: No (disabled by default - Windows only) gdk: No (disabled) gdk_pixbuf: No (disabled) ghostscript: No (disabled) gtk: Yes lasi: No (disabled) pangocairo: Yes poppler: Yes quartz: No (disabled by default - Mac only) rsvg: Yes webp: Yes xlib: Yes language extensions: gv_sharp: No (disabled) gv_d: No (disabled by default - incomplete) gv_go: No (disabled) gv_guile: No (disabled) gv_java: No (disabled) gv_javascript: No (disabled by default - incomplete) gv_lua: No (disabled) gv_perl: Yes gv_php: No (disabled) gv_python3: Yes gv_R: No (disabled) gv_ruby: No (disabled) gv_tcl: No (tcl not available) tcldot: No (tcl not available) tclpathplan: No (tcl not available) gdtclft: No (tcl not available) >>> Source configured. >>> Compiling source in /auto/vestec1-elixir/projects/biocev/gentoo/var/tmp/portage/media-gfx/graphviz-11.0.0/work/graphviz-11.0.0 ... ... /auto/vestec1-elixir/projects/biocev/gentoo/bin/bash ../../libtool --tag=CC --mode=link x86_64-pc-linux-gnu-gcc -O2 -pipe -O2 -pipe -mtune=native -ftree-vectorize -fpermissive -Wall -Wextra -Wmissing-include-dirs -Wswitch-default -Wfloat-equal -Wundef -Wshadow -Wpointer-arith -Wbad-function-cast -Wcast-qual -Wconversion -Wstrict-prototypes -Wmissing-prototypes -Wnested-externs -Wtrampolines -Wlogical-op -Wno-unknown-pragmas -Wstrict-prototypes -Wpointer-arith -Wall -Wl,-O1 -Wl,--as-needed -o dot dot-dot.o dot-no_builtins.o ../../lib/gvc/libgvc.la ../../lib/cgraph/libcgraph.la libtool: link: x86_64-pc-linux-gnu-gcc -O2 -pipe -O2 -pipe -mtune=native -ftree-vectorize -fpermissive -Wall -Wextra -Wmissing-include-dirs -Wswitch-default -Wfloat-equal -Wundef -Wshadow -Wpointer-arith -Wbad-function-cast -Wcast-qual -Wconversion -Wstrict-prototypes -Wmissing-prototypes -Wnested-externs -Wtrampolines -Wlogical-op -Wno-unknown-pragmas -Wstrict-prototypes -Wpointer-arith -Wall -Wl,-O1 -o .libs/dot dot-dot.o dot-no_builtins.o -Wl,--as-needed ../../lib/gvc/.libs/libgvc.so ../../lib/cgraph/.libs/libcgraph.so -Wl,-rpath -Wl,/auto/vestec1-elixir/projects/biocev/gentoo/usr/lib64 /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: warning: libxdot.so.4, needed by ../../lib/gvc/.libs/libgvc.so, not found (try using -rpath or -rpath-link) /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: warning: libcdt.so.5, needed by ../../lib/gvc/.libs/libgvc.so, not found (try using -rpath or -rpath-link) /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: warning: libpathplan.so.4, needed by ../../lib/gvc/.libs/libgvc.so, not found (try using -rpath or -rpath-link) /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/gvc/.libs/libgvc.so: undefined reference to `dtflatten' /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/cgraph/.libs/libcgraph.so: undefined reference to `dtrestore' /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/cgraph/.libs/libcgraph.so: undefined reference to `dtextract' /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/cgraph/.libs/libcgraph.so: undefined reference to `dtdisc' /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/gvc/.libs/libgvc.so: undefined reference to `dtclose' /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/gvc/.libs/libgvc.so: undefined reference to `Dttree' /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/gvc/.libs/libgvc.so: undefined reference to `freePath' /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/cgraph/.libs/libcgraph.so: undefined reference to `dtview' /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/gvc/.libs/libgvc.so: undefined reference to `Dtobag' /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/gvc/.libs/libgvc.so: undefined reference to `make_polyline' /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/gvc/.libs/libgvc.so: undefined reference to `Dtqueue' /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/gvc/.libs/libgvc.so: undefined reference to `Pshortestpath' /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/gvc/.libs/libgvc.so: undefined reference to `parseXDotF' /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/gvc/.libs/libgvc.so: undefined reference to `freeXDot' /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/gvc/.libs/libgvc.so: undefined reference to `Proutespline' /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/gvc/.libs/libgvc.so: undefined reference to `Dtoset' /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/gvc/.libs/libgvc.so: undefined reference to `dtsize' /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/cgraph/.libs/libcgraph.so: undefined reference to `dtrenew' /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/gvc/.libs/libgvc.so: undefined reference to `dtopen' collect2: error: ld returned 1 exit status make[3]: *** [Makefile:761: dot] Error 1 make[3]: Leaving directory '/auto/vestec1-elixir/projects/biocev/gentoo/var/tmp/portage/media-gfx/graphviz-11.0.0/work/graphviz-11.0.0/cmd/dot' Should the libpathplan.so.4 would originate from tcl? [ebuild R ] dev-lang/tcl-8.6.14:0/8.6::gentoo USE="threads -debug" 0 KiB
$ emerge --info '=media-gfx/graphviz-11.0.0::gentoo' !!! Repository 'science' is missing masters attribute in '/auto/vestec1-elixir/projects/biocev/gentoo/var/db/repos/science/metadata/layout.conf' !!! Set 'masters = gentoo' in this file for future compatibility !!! Repository 'stefantalpalaru' is missing masters attribute in '/auto/vestec1-elixir/projects/biocev/gentoo/var/db/repos/stefantalpalaru/metadata/layout.conf' !!! Set 'masters = gentoo' in this file for future compatibility !!! Repository 'jgenco' is missing masters attribute in '/auto/vestec1-elixir/projects/biocev/gentoo/var/db/repos/jgenco/metadata/layout.conf' !!! Set 'masters = gentoo' in this file for future compatibility WARNING: One or more repositories have missing repo_name entries: /auto/vestec1-elixir/projects/biocev/gentoo/var/db/repos/jgenco/profiles/repo_name /auto/vestec1-elixir/projects/biocev/gentoo/var/db/repos/stefantalpalaru/profiles/repo_name /auto/vestec1-elixir/projects/biocev/gentoo/var/db/repos/science/profiles/repo_name NOTE: Each repo_name entry should be a plain text file containing a unique name for the repository on the first line. Portage 3.0.65 (python 3.11.9-final-0, default/linux/amd64/17.1/no-multilib/prefix/kernel-3.2+, gcc-14, glibc-2.38-r13, 6.1.0-21-amd64 x86_64) ================================================================= System Settings ================================================================= System uname: Linux-6.1.0-21-amd64-x86_64-Intel-R-_Xeon-R-_Platinum_8260_CPU_@_2.40GHz-with-glibc2.38 KiB Mem: 3169341952 total, 104623736 free KiB Swap: 16383996 total, 7536 free Timestamp of repository gentoo: Wed, 03 Jul 2024 00:45:00 +0000 Head commit of repository gentoo: fb0e9e0278ffac78d76f3db04ed24aaebef5252c sh bash 5.2_p26-r6 ld GNU ld (Gentoo 2.42 p6) 2.42.0 app-misc/pax-utils: 1.3.7::gentoo app-shells/bash: 5.2_p26-r6::gentoo dev-build/autoconf: 2.13-r8::gentoo, 2.71-r7::gentoo, 2.72-r1::gentoo dev-build/automake: 1.16.5-r2::gentoo dev-build/cmake: 3.29.3::gentoo dev-build/libtool: 2.4.7-r4::gentoo dev-build/make: 4.4.1-r1::gentoo dev-build/meson: 1.4.1::gentoo dev-java/java-config: 2.3.4::gentoo dev-lang/perl: 5.38.2-r6::gentoo dev-lang/python: 3.10.14_p1-r1::gentoo, 3.11.9-r1::gentoo, 3.12.4_p1::gentoo, 3.13.0_beta3::gentoo dev-lang/rust: 1.74.1::gentoo dev-lang/rust-bin: 1.79.0::gentoo sys-apps/baselayout: 2.15::gentoo sys-apps/sandbox: 2.39::gentoo sys-devel/binutils: 2.41-r5::gentoo, 2.42-r2::gentoo sys-devel/binutils-config: 5.5::gentoo sys-devel/clang: 16.0.6::gentoo, 17.0.6::gentoo, 18.1.8::gentoo sys-devel/gcc: 13.2.1_p20240210::gentoo, 14.1.1_p20240622::gentoo sys-devel/gcc-config: 2.11::gentoo sys-devel/lld: 16.0.6::gentoo, 17.0.6::gentoo, 18.1.8::gentoo sys-devel/llvm: 15.0.7-r3::gentoo, 16.0.6::gentoo, 17.0.6::gentoo, 18.1.8::gentoo sys-kernel/linux-headers: 6.9::gentoo (virtual/os-headers) sys-libs/glibc: 2.38-r13::gentoo Repositories: gentoo location: /auto/vestec1-elixir/projects/biocev/gentoo/var/db/repos/gentoo sync-type: rsync sync-uri: rsync://rsync.gentoo.org/gentoo-portage priority: -1000 volatile: True sync-rsync-extra-opts: sync-rsync-verify-max-age: 3 sync-rsync-verify-jobs: 1 sync-rsync-verify-metamanifest: no jgenco location: /auto/vestec1-elixir/projects/biocev/gentoo/var/db/repos/jgenco sync-type: webrsync sync-uri: https://github.com/jgenco/jgenco-overlay masters: gentoo volatile: True science location: /auto/vestec1-elixir/projects/biocev/gentoo/var/db/repos/science sync-type: webrsync sync-uri: https://gitweb.gentoo.org/proj/sci.git masters: gentoo volatile: True stefantalpalaru location: /auto/vestec1-elixir/projects/biocev/gentoo/var/db/repos/stefantalpalaru sync-type: webrsync sync-uri: https://github.com/stefantalpalaru/gentoo-overlay masters: gentoo volatile: True ACCEPT_KEYWORDS="amd64 ~amd64" ACCEPT_LICENSE="@FREE dlj-1.1 sun-bcla-java-vm Oracle-BCLA-JavaSE IBM-J1.6 NPSL RAR Intel-SDP fasta vienna-rna unafold GRL MSttfEULA hplip-plugin meme mRNAmarkup ApE ICS ipw3945 finchtv modeller gmap abyss swiss-prot Aladdin AVASYS pyvcf Non-profit-OSL-3.0 estscan bcca_2010 oncotator Adobe blat staden CeCILL-1.1 phrap STRIDE cctbx-2.0 bh-luxi ARIADNE unRAR all-rights-reserved trf annovar_personal_only stampy-academic BSD-BroadInstitute UPennState freedist free-noncomm blasr sun-jlfgr FLI-Jena PSTT netperf sun-jsr67 xv vim.org OSGi-Specification-2.0 colt google-chrome ACE AFL churchill genscan no-source-code ISSL JSON MPEG-4 Apache-2.0 BSD MIT BSD-2 FSFAP unicode Subversion PSF-2.4 merlin android julius CROSSOVER-3 lha PUEL-11 WPS-EULA" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-O2 -pipe -O2 -pipe -mtune=native -ftree-vectorize -fpermissive" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/auto/vestec1-elixir/projects/biocev/gentoo/etc /etc /usr/share/gnupg/qualified.txt" CONFIG_PROTECT_MASK="/auto/vestec1-elixir/projects/biocev/gentoo/etc/env.d /etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c" CONFIG_SHELL="/auto/vestec1-elixir/projects/biocev/gentoo/bin/bash" CXXFLAGS="-O2 -pipe -O2 -pipe -mtune=native -ftree-vectorize -fpermissive" DISTDIR="/auto/vestec1-elixir/projects/biocev/gentoo/var/cache/distfiles" ENV_UNSET="CARGO_HOME DBUS_SESSION_BUS_ADDRESS DISPLAY GDK_PIXBUF_MODULE_FILE GOBIN GOPATH PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR XDG_STATE_HOME" FCFLAGS="-O2 -pipe" FEATURES="assume-digests binpkg-docompress binpkg-dostrip binpkg-logs binpkg-multi-instance buildpkg-live config-protect-if-modified distlocks ebuild-locks fixlafiles ipc-sandbox merge-sync merge-wait multilib-strict network-sandbox news nostrip parallel-fetch pid-sandbox pkgdir-index-trusted preserve-libs protect-owned qa-unresolved-soname-deps sfperms splitdebug strict unknown-features-warn unmerge-logs unmerge-orphans unprivileged" FFLAGS="-O2 -pipe" GENTOO_MIRRORS="http://distfiles.gentoo.org" LDFLAGS="-Wl,-O1 -Wl,--as-needed" LEX="flex" MAKEOPTS="-j64" PKGDIR="/auto/vestec1-elixir/projects/biocev/gentoo/var/cache/binpkgs" PORTAGE_CONFIGROOT="/auto/vestec1-elixir/projects/biocev/gentoo/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git" PORTAGE_TMPDIR="/auto/vestec1-elixir/projects/biocev/gentoo/var/tmp" SHELL="/auto/vestec1-elixir/projects/biocev/gentoo/bin/bash" USE="X a52 aac acl acpi alsa amd64 amr amrenc aom apache apache2 archive armadillo asm audit av1 avx avx2 berkdb blas bluray bmp boost bz2 bzip2 cairo caps cdda cdio cdr cdrom cgi chromium cli codec2 coin cpudetection cracklib crypt cryptlib cryptsetup cups curl cxx dav1d dbus device-mapper directfb directx dri dri3 drm dvbpsi dvd dvda dxf dxva2 egl elogind emboss encode eselect-ldso exif faad fax fbcon fdk ffmpeg fftw flac fontconfig foomatic fortran gbm gcrypt gd gdal gdbm geoip geolocation georeferencer geos gimp glpk gml gmp gnutls gps grass gstreamer gtk gtk3 gui h.264 h.265 h264 h265 hal haptic hdf5 heif hevc hpijs hwdb iconv icu id3tag imaging innodb inotify iproute2 ipv6 java javafx javascript jbig jce jpeg jpeg2k jpg js jscript kdrive keymap kms ladspa lapack laptop las lcms libaom libdrm libkms libnotify librtmp libsoxr libtesseract libtirpc libv4l libxml2 live lm-sensors lm_sensors lz4 lzma mad mariadb matroska mjpeg mmal mmx mp3 mpeg mysql ncurses netcdf nfs nls nptl nptlonly nscd nss ntfsprogs nvenc objc ocr odbc ogdi ogg openal opencl opengl openh264 openmp openssl opus parport pbs pcre pcre16 pcsc-lite pdal pdf perl php png polar polkit postgres ppds pppd prefix python qemu qml qt3support qt4 qt5 qt6 rav1e readline rendering resolvconf romio rubberband scanner seccomp server session sha slideshow smartcard sndfile sndio split-usr sqlite srt sse sse2 sse3 sse4_1 sse4_2 ssh ssl sslv3 ssse3 startup-notification suexec svg svt-av1 tcl tcpd test-rust threads tiff tk tkip tools truetype twolame udev unicode unwind upnp usb v4l v4l2 vaapi vidstab vim-syntax virtualbox vmaf vnc vorbis vp8 vp9 vpx vulkan wavpack wayland webp widgets x11 x264 x265 xa xcb xephyr xft xls xml xmp xorg xrandr xv xvfb xvid xvmc zip zlib zstd" ABI_X86="64" ADA_TARGET="gcc_12" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_anon authn_dbm authn_file authz_dbm authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir env expires ext_filter file_cache filter headers include info log_config logio mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="karbon sheets words" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="aes avx avx2 avx512f avx512dq avx512cd avx512bw avx512vl f16c fma3 mmx mmxext pclmul popcnt rdrand sse sse2 sse3 sse4_1 sse4_2 ssse3" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock greis isync itrax mtk3301 ntrip navcom oceanserver oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 tsip tripmate tnt ublox" INPUT_DEVICES="libinput" KERNEL="linux" LCD_DEVICES="bayrad cfontz glk hd44780 lb216 lcdm001 mtxorb text" LUA_SINGLE_TARGET="lua5-1" LUA_TARGETS="lua5-1" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php8-2" POSTGRES_TARGETS="postgres15" PYTHON_SINGLE_TARGET="python3_11" PYTHON_TARGETS="python2_7 python3_9 python3_10 python3_11" RUBY_TARGETS="ruby31 ruby32 ruby33" VIDEO_CARDS="amdgpu fbdev intel nouveau radeon radeonsi vesa dummy" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipp2p iface geoip fuzzy condition tarpit sysrq proto logmark ipmark dhcpmac delude chaos account" Unset: ADDR2LINE, AR, ARFLAGS, AS, ASFLAGS, CC, CCLD, CPP, CPPFLAGS, CTARGET, CXX, CXXFILT, ELFEDIT, EMERGE_DEFAULT_OPTS, EXTRA_ECONF, F77FLAGS, FC, GCOV, GPROF, INSTALL_MASK, LANG, LC_ALL, LD, LFLAGS, LIBTOOL, LINGUAS, MAKE, MAKEFLAGS, NM, OBJCOPY, OBJDUMP, PORTAGE_BINHOST, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, PYTHONPATH, RANLIB, READELF, RUSTFLAGS, SIZE, STRINGS, STRIP, YACC, YFLAGS
Actually it happens also with older 10.0.1: make[3]: Entering directory '/auto/vestec1-elixir/projects/biocev/gentoo/var/tmp/portage/media-gfx/graphviz-10.0.1/work/graphviz-10.0.1/cmd/dot' x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I../.. -I../../lib -I../../lib/common -I../../lib/gvc -I../../lib/pathplan -I../../lib/cgraph -I../../lib/cdt -DDEMAND_LOADING=1 -O2 -pipe -O2 -pipe -mtune=native -ftree-vectorize -fpermissive -Wall -Wextra -Wmissing-include-dirs -Wswitch-default -Wfloat-equal -Wundef -Wshadow -Wpointer-arith -Wbad-function-cast -Wcast-qual -Wconversion -Wstrict-prototypes -Wmissing-prototypes -Wnested-externs -Wtrampolines -Wlogical-op -Wno-unknown-pragmas -Wstrict-prototypes -Wpointer-arith -Wall -c -o dot-dot.o `test -f 'dot.c' || echo './'`dot.c x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I../.. -I../../lib -I../../lib/common -I../../lib/gvc -I../../lib/pathplan -I../../lib/cgraph -I../../lib/cdt -DDEMAND_LOADING=1 -O2 -pipe -O2 -pipe -mtune=native -ftree-vectorize -fpermissive -Wall -Wextra -Wmissing-include-dirs -Wswitch-default -Wfloat-equal -Wundef -Wshadow -Wpointer-arith -Wbad-function-cast -Wcast-qual -Wconversion -Wstrict-prototypes -Wmissing-prototypes -Wnested-externs -Wtrampolines -Wlogical-op -Wno-unknown-pragmas -Wstrict-prototypes -Wpointer-arith -Wall -c -o dot-no_builtins.o `test -f 'no_builtins.c' || echo './'`no_builtins.c x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I../.. -I../../lib -I../../lib/common -I../../lib/gvc -I../../lib/pathplan -I../../lib/cgraph -I../../lib/cdt -DDEMAND_LOADING=1 -O2 -pipe -O2 -pipe -mtune=native -ftree-vectorize -fpermissive -Wall -Wextra -Wmissing-include-dirs -Wswitch-default -Wfloat-equal -Wundef -Wshadow -Wpointer-arith -Wbad-function-cast -Wcast-qual -Wconversion -Wstrict-prototypes -Wmissing-prototypes -Wnested-externs -Wtrampolines -Wlogical-op -Wno-unknown-pragmas -Wstrict-prototypes -Wpointer-arith -Wall -c -o dot_builtins-dot.o `test -f 'dot.c' || echo './'`dot.c x86_64-pc-linux-gnu-g++ -std=c++11 -DHAVE_CONFIG_H -I. -I../.. -I../../lib -I../../lib/common -I../../lib/gvc -I../../lib/pathplan -I../../lib/cgraph -I../../lib/cdt -DDEMAND_LOADING=1 -O2 -pipe -O2 -pipe -mtune=native -ftree-vectorize -fpermissive -fPIE -fPIC -c -o dot_builtins-dot_builtins.o `test -f 'dot_builtins.cpp' || echo './'`dot_builtins.cpp /auto/vestec1-elixir/projects/biocev/gentoo/bin/bash ../../libtool --tag=CXX --mode=link x86_64-pc-linux-gnu-g++ -std=c++11 -O2 -pipe -O2 -pipe -mtune=native -ftree-vectorize -fpermissive -fPIE -fPIC -Wl,-O1 -Wl,--as-needed -o dot_builtins dot_builtins-dot.o dot_builtins-dot_builtins.o ../../plugin/dot_layout/libgvplugin_dot_layout.la ../../plugin/neato_layout/libgvplugin_neato_layout.la ../../plugin/core/libgvplugin_core.la ../../lib/gvc/libgvc.la ../../lib/pathplan/libpathplan.la ../../lib/cgraph/libcgraph.la ../../lib/xdot/libxdot.la ../../lib/cdt/libcdt.la -lexpat -lz -lm ../../plugin/gd/libgvplugin_gd.la -lgd -lgd ../../plugin/pango/libgvplugin_pango.la -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lharfbuzz -lcairo ../../plugin/webp/libgvplugin_webp.la -lwebp /auto/vestec1-elixir/projects/biocev/gentoo/bin/bash ../../libtool --tag=CC --mode=link x86_64-pc-linux-gnu-gcc -O2 -pipe -O2 -pipe -mtune=native -ftree-vectorize -fpermissive -Wall -Wextra -Wmissing-include-dirs -Wswitch-default -Wfloat-equal -Wundef -Wshadow -Wpointer-arith -Wbad-function-cast -Wcast-qual -Wconversion -Wstrict-prototypes -Wmissing-prototypes -Wnested-externs -Wtrampolines -Wlogical-op -Wno-unknown-pragmas -Wstrict-prototypes -Wpointer-arith -Wall -Wl,-O1 -Wl,--as-needed -o dot dot-dot.o dot-no_builtins.o ../../lib/gvc/libgvc.la ../../lib/cgraph/libcgraph.la libtool: link: x86_64-pc-linux-gnu-gcc -O2 -pipe -O2 -pipe -mtune=native -ftree-vectorize -fpermissive -Wall -Wextra -Wmissing-include-dirs -Wswitch-default -Wfloat-equal -Wundef -Wshadow -Wpointer-arith -Wbad-function-cast -Wcast-qual -Wconversion -Wstrict-prototypes -Wmissing-prototypes -Wnested-externs -Wtrampolines -Wlogical-op -Wno-unknown-pragmas -Wstrict-prototypes -Wpointer-arith -Wall -Wl,-O1 -o .libs/dot dot-dot.o dot-no_builtins.o -Wl,--as-needed ../../lib/gvc/.libs/libgvc.so ../../lib/cgraph/.libs/libcgraph.so -Wl,-rpath -Wl,/auto/vestec1-elixir/projects/biocev/gentoo/usr/lib64 /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: warning: libxdot.so.4, needed by ../../lib/gvc/.libs/libgvc.so, not found (try using -rpath or -rpath-link) /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: warning: libcdt.so.5, needed by ../../lib/gvc/.libs/libgvc.so, not found (try using -rpath or -rpath-link) /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: warning: libpathplan.so.4, needed by ../../lib/gvc/.libs/libgvc.so, not found (try using -rpath or -rpath-link) /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/gvc/.libs/libgvc.so: undefined reference to `dtflatten' /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/cgraph/.libs/libcgraph.so: undefined reference to `dtrestore' /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/cgraph/.libs/libcgraph.so: undefined reference to `dtextract' /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/cgraph/.libs/libcgraph.so: undefined reference to `dtdisc' /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/gvc/.libs/libgvc.so: undefined reference to `dtclose' /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/gvc/.libs/libgvc.so: undefined reference to `Dttree' /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/gvc/.libs/libgvc.so: undefined reference to `freePath' /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/cgraph/.libs/libcgraph.so: undefined reference to `dtview' /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/gvc/.libs/libgvc.so: undefined reference to `Dtobag' /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/gvc/.libs/libgvc.so: undefined reference to `make_polyline' /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/gvc/.libs/libgvc.so: undefined reference to `Dtqueue' /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/gvc/.libs/libgvc.so: undefined reference to `Pshortestpath' /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/gvc/.libs/libgvc.so: undefined reference to `parseXDotF' /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/gvc/.libs/libgvc.so: undefined reference to `freeXDot' /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/gvc/.libs/libgvc.so: undefined reference to `Proutespline' /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/gvc/.libs/libgvc.so: undefined reference to `Dtoset' /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/gvc/.libs/libgvc.so: undefined reference to `dtsize' /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/cgraph/.libs/libcgraph.so: undefined reference to `dtrenew' /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/gvc/.libs/libgvc.so: undefined reference to `dtopen' collect2: error: ld returned 1 exit status make[3]: *** [Makefile:761: dot] Error 1 make[3]: *** Waiting for unfinished jobs.... libtool: link: x86_64-pc-linux-gnu-g++ -std=c++11 -O2 -pipe -O2 -pipe -mtune=native -ftree-vectorize -fpermissive -fPIE -fPIC -Wl,-O1 -o .libs/dot_builtins dot_builtins-dot.o dot_builtins-dot_builtins.o -Wl,--as-needed ../../plugin/dot_layout/.libs/libgvplugin_dot_layout.so ../../plugin/neato_layout/.libs/libgvplugin_neato_layout.so ../../plugin/core/.libs/libgvplugin_core.so ../../lib/gvc/.libs/libgvc.so ../../lib/pathplan/.libs/libpathplan.so ../../lib/cgraph/.libs/libcgraph.so ../../lib/xdot/.libs/libxdot.so ../../lib/cdt/.libs/libcdt.so -lexpat -lz -lm ../../plugin/gd/.libs/libgvplugin_gd.so -lgd ../../plugin/pango/.libs/libgvplugin_pango.so -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lharfbuzz -lcairo ../../plugin/webp/.libs/libgvplugin_webp.so -lwebp -Wl,-rpath -Wl,/auto/vestec1-elixir/projects/biocev/gentoo/usr/lib64/graphviz -Wl,-rpath -Wl,/auto/vestec1-elixir/projects/biocev/gentoo/usr/lib64 make[3]: Leaving directory '/auto/vestec1-elixir/projects/biocev/gentoo/var/tmp/portage/media-gfx/graphviz-10.0.1/work/graphviz-10.0.1/cmd/dot'
Hmm, also 9.0.0 cannot build: make[3]: Entering directory '/auto/vestec1-elixir/projects/biocev/gentoo/var/tmp/portage/media-gfx/graphviz-9.0.0/work/graphviz-9.0.0/cmd/dot' x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I../.. -I../../lib -I../../lib/common -I../../lib/gvc -I../../lib/pathplan -I../../lib/cgraph -I../../lib/cdt -DDEMAND_LOADING=1 -O2 -pipe -O2 -pipe -mtune=native -ftree-vectorize -fpermissive -Wall -Wextra -Wmissing-include-dirs -Wswitch-default -Wfloat-equal -Wundef -Wshadow -Wpointer-arith -Wbad-function-cast -Wcast-qual -Wconversion -Wstrict-prototypes -Wmissing-prototypes -Wnested-externs -Wtrampolines -Wlogical-op -Wno-unknown-pragmas -Wstrict-prototypes -Wpointer-arith -Wall -c -o dot-dot.o `test -f 'dot.c' || echo './'`dot.c x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I../.. -I../../lib -I../../lib/common -I../../lib/gvc -I../../lib/pathplan -I../../lib/cgraph -I../../lib/cdt -DDEMAND_LOADING=1 -O2 -pipe -O2 -pipe -mtune=native -ftree-vectorize -fpermissive -Wall -Wextra -Wmissing-include-dirs -Wswitch-default -Wfloat-equal -Wundef -Wshadow -Wpointer-arith -Wbad-function-cast -Wcast-qual -Wconversion -Wstrict-prototypes -Wmissing-prototypes -Wnested-externs -Wtrampolines -Wlogical-op -Wno-unknown-pragmas -Wstrict-prototypes -Wpointer-arith -Wall -c -o dot-no_builtins.o `test -f 'no_builtins.c' || echo './'`no_builtins.c x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I../.. -I../../lib -I../../lib/common -I../../lib/gvc -I../../lib/pathplan -I../../lib/cgraph -I../../lib/cdt -DDEMAND_LOADING=1 -O2 -pipe -O2 -pipe -mtune=native -ftree-vectorize -fpermissive -Wall -Wextra -Wmissing-include-dirs -Wswitch-default -Wfloat-equal -Wundef -Wshadow -Wpointer-arith -Wbad-function-cast -Wcast-qual -Wconversion -Wstrict-prototypes -Wmissing-prototypes -Wnested-externs -Wtrampolines -Wlogical-op -Wno-unknown-pragmas -Wstrict-prototypes -Wpointer-arith -Wall -c -o dot_builtins-dot.o `test -f 'dot.c' || echo './'`dot.c x86_64-pc-linux-gnu-g++ -std=c++11 -DHAVE_CONFIG_H -I. -I../.. -I../../lib -I../../lib/common -I../../lib/gvc -I../../lib/pathplan -I../../lib/cgraph -I../../lib/cdt -DDEMAND_LOADING=1 -O2 -pipe -O2 -pipe -mtune=native -ftree-vectorize -fpermissive -fPIE -fPIC -c -o dot_builtins-dot_builtins.o `test -f 'dot_builtins.cpp' || echo './'`dot_builtins.cpp /auto/vestec1-elixir/projects/biocev/gentoo/bin/bash ../../libtool --tag=CC --mode=link x86_64-pc-linux-gnu-gcc -O2 -pipe -O2 -pipe -mtune=native -ftree-vectorize -fpermissive -Wall -Wextra -Wmissing-include-dirs -Wswitch-default -Wfloat-equal -Wundef -Wshadow -Wpointer-arith -Wbad-function-cast -Wcast-qual -Wconversion -Wstrict-prototypes -Wmissing-prototypes -Wnested-externs -Wtrampolines -Wlogical-op -Wno-unknown-pragmas -Wstrict-prototypes -Wpointer-arith -Wall -Wl,-O1 -Wl,--as-needed -o dot dot-dot.o dot-no_builtins.o ../../lib/gvc/libgvc.la ../../lib/cgraph/libcgraph.la /auto/vestec1-elixir/projects/biocev/gentoo/bin/bash ../../libtool --tag=CXX --mode=link x86_64-pc-linux-gnu-g++ -std=c++11 -O2 -pipe -O2 -pipe -mtune=native -ftree-vectorize -fpermissive -fPIE -fPIC -Wl,-O1 -Wl,--as-needed -o dot_builtins dot_builtins-dot.o dot_builtins-dot_builtins.o ../../plugin/dot_layout/libgvplugin_dot_layout.la ../../plugin/neato_layout/libgvplugin_neato_layout.la ../../plugin/core/libgvplugin_core.la ../../lib/gvc/libgvc.la ../../lib/pathplan/libpathplan.la ../../lib/cgraph/libcgraph.la ../../lib/xdot/libxdot.la ../../lib/cdt/libcdt.la -lexpat -lz -lm ../../plugin/gd/libgvplugin_gd.la -lgd -lgd ../../plugin/pango/libgvplugin_pango.la -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lharfbuzz -lcairo ../../plugin/webp/libgvplugin_webp.la -lwebp libtool: link: x86_64-pc-linux-gnu-gcc -O2 -pipe -O2 -pipe -mtune=native -ftree-vectorize -fpermissive -Wall -Wextra -Wmissing-include-dirs -Wswitch-default -Wfloat-equal -Wundef -Wshadow -Wpointer-arith -Wbad-function-cast -Wcast-qual -Wconversion -Wstrict-prototypes -Wmissing-prototypes -Wnested-externs -Wtrampolines -Wlogical-op -Wno-unknown-pragmas -Wstrict-prototypes -Wpointer-arith -Wall -Wl,-O1 -o .libs/dot dot-dot.o dot-no_builtins.o -Wl,--as-needed ../../lib/gvc/.libs/libgvc.so ../../lib/cgraph/.libs/libcgraph.so -Wl,-rpath -Wl,/auto/vestec1-elixir/projects/biocev/gentoo/usr/lib64 /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: warning: libxdot.so.4, needed by ../../lib/gvc/.libs/libgvc.so, not found (try using -rpath or -rpath-link) /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: warning: libcdt.so.5, needed by ../../lib/gvc/.libs/libgvc.so, not found (try using -rpath or -rpath-link) /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: warning: libpathplan.so.4, needed by ../../lib/gvc/.libs/libgvc.so, not found (try using -rpath or -rpath-link) /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/gvc/.libs/libgvc.so: undefined reference to `dtflatten' /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/cgraph/.libs/libcgraph.so: undefined reference to `dtrestore' /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/cgraph/.libs/libcgraph.so: undefined reference to `dtextract' /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/cgraph/.libs/libcgraph.so: undefined reference to `dtdisc' /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/gvc/.libs/libgvc.so: undefined reference to `dtclose' /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/gvc/.libs/libgvc.so: undefined reference to `Dttree' /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/gvc/.libs/libgvc.so: undefined reference to `freePath' /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/cgraph/.libs/libcgraph.so: undefined reference to `dtview' /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/gvc/.libs/libgvc.so: undefined reference to `Dtobag' /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/gvc/.libs/libgvc.so: undefined reference to `make_polyline' /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/gvc/.libs/libgvc.so: undefined reference to `Dtqueue' /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/gvc/.libs/libgvc.so: undefined reference to `Pshortestpath' /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/gvc/.libs/libgvc.so: undefined reference to `parseXDotF' /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/gvc/.libs/libgvc.so: undefined reference to `freeXDot' /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/gvc/.libs/libgvc.so: undefined reference to `Proutespline' /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/gvc/.libs/libgvc.so: undefined reference to `Dtoset' /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/gvc/.libs/libgvc.so: undefined reference to `dtsize' /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/cgraph/.libs/libcgraph.so: undefined reference to `dtrenew' /auto/vestec1-elixir/projects/biocev/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: ../../lib/gvc/.libs/libgvc.so: undefined reference to `dtopen' collect2: error: ld returned 1 exit status make[3]: *** [Makefile:771: dot] Error 1 make[3]: *** Waiting for unfinished jobs.... libtool: link: x86_64-pc-linux-gnu-g++ -std=c++11 -O2 -pipe -O2 -pipe -mtune=native -ftree-vectorize -fpermissive -fPIE -fPIC -Wl,-O1 -o .libs/dot_builtins dot_builtins-dot.o dot_builtins-dot_builtins.o -Wl,--as-needed ../../plugin/dot_layout/.libs/libgvplugin_dot_layout.so ../../plugin/neato_layout/.libs/libgvplugin_neato_layout.so ../../plugin/core/.libs/libgvplugin_core.so ../../lib/gvc/.libs/libgvc.so ../../lib/pathplan/.libs/libpathplan.so ../../lib/cgraph/.libs/libcgraph.so ../../lib/xdot/.libs/libxdot.so ../../lib/cdt/.libs/libcdt.so -lexpat -lz -lm ../../plugin/gd/.libs/libgvplugin_gd.so -lgd ../../plugin/pango/.libs/libgvplugin_pango.so -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lharfbuzz -lcairo ../../plugin/webp/.libs/libgvplugin_webp.so -lwebp -Wl,-rpath -Wl,/auto/vestec1-elixir/projects/biocev/gentoo/usr/lib64/graphviz -Wl,-rpath -Wl,/auto/vestec1-elixir/projects/biocev/gentoo/usr/lib64 make[3]: Leaving directory '/auto/vestec1-elixir/projects/biocev/gentoo/var/tmp/portage/media-gfx/graphviz-9.0.0/work/graphviz-9.0.0/cmd/dot'
