too long lines were shrinked: x86_64-pc-linux-gnu-g++ -DNDEBUG -pthread -O2 -pipe -march=native -fno-diagnostics-color -fopenmp -ffast-math -c -o Linux/trimtorefefa.o trimtorefefa.cpp x86_64-pc-linux-gnu-g++ -DNDEBUG -pthread -O2 -pipe -march=native -fno-diagnostics-color -fopenmp -ffast-math -c -o Linux/uclust.o uclust.cpp x86_64-pc-linux-gnu-g++ -DNDEBUG -pthread -O2 -pipe -march=native -fno-diagnostics-color -fopenmp -ffast-math -c -o Linux/upgma5.o upgma5.cpp x86_64-pc-linux-gnu-g++ -DNDEBUG -pthread -O2 -pipe -march=native -fno-diagnostics-color -fopenmp -ffast-math -c -o Linux/usage.o usage.cpp x86_64-pc-linux-gnu-g++ -DNDEBUG -pthread -O2 -pipe -march=native -fno-diagnostics-color -fopenmp -ffast-math -c -o Linux/usorter.o usorter.cpp x86_64-pc-linux-gnu-g++ -O2 -pipe -march=native -fno-diagnostics-color -fopenmp -ffast-math -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -fopenmp -pthread -lpthread Linux/addconfseq.o Linux/align.o Linux/alignpairflat.o Linux/allocflat.o Linux/alnalnsflat.o Linux/alnmsasflat.o Li x86_64-pc-linux-gnu-g++: fatal error: cannot read spec file libgomp.spec: No such file or directory compilation terminated. make: *** [Makefile:34: Linux/muscle] Error 1 ------------------------------------------------------------------- This is an unstable amd64 chroot image at a tinderbox (==build bot) name: 17.1_no_multilib_systemd_merged_usr-20240318-012534 ------------------------------------------------------------------- gcc-config -l: [1] x86_64-pc-linux-gnu-13 * clang/llvm (if any): clang version 18.1.0 Target: x86_64-pc-linux-gnu Thread model: posix InstalledDir: /usr/lib/llvm/18/bin Configuration file: /etc/clang/x86_64-pc-linux-gnu-clang.cfg /usr/lib/llvm/18 18.1.0 Python 3.11.8 Available Ruby profiles: [1] ruby31 (with Rubygems) [2] ruby33 (with Rubygems) * Available Rust versions: [1] rust-bin-1.76.0 * The following VMs are available for generation-2: 1) Eclipse Temurin JDK 17.0.10_p7 [openjdk-bin-17] *) Eclipse Temurin JDK 21.0.2_p13 [openjdk-bin-21] 3) Eclipse Temurin JDK 8.402_p06 [openjdk-bin-8] Available Java Virtual Machines: [1] openjdk-bin-8 [2] openjdk-bin-17 [3] openjdk-bin-21 system-vm The Glorious Glasgow Haskell Compilation System, version 9.2.8 php cli (if any): go version go1.22.1 linux/amd64 HEAD of ::gentoo commit 8283d31a11619813657f3b26d4b0003fa89228d0 Author: Repository mirror & CI <repomirrorci@gentoo.org> Date: Wed Mar 20 13:04:01 2024 +0000 2024-03-20 13:04:00 UTC emerge -qpvO sci-biology/muscle [ebuild N ] sci-biology/muscle-5.1.0
Created attachment 887994 [details] emerge-info.txt
Created attachment 887995 [details] emerge-history.txt
Created attachment 887996 [details] environment
Created attachment 887997 [details] etc.clang.tar.xz
Created attachment 887998 [details] etc.portage.tar.xz
Created attachment 887999 [details] qlist-info.txt
Created attachment 888000 [details] sci-biology:muscle-5.1.0:20240320-135228.log
