Hi, with MAKEOPTS=-j1 I can almost finish stage3 but I get: (CDPATH="${ZSH_VERSION+.}:" && cd .. && /auto/vestec1-elixir/projects/biocev/mmokrejs/gentoo/tmp/usr/bin/bash '/auto/vestec1-elixir/projects/biocev/mmokrejs/gentoo/var/tmp/portage/sys-devel/m4-1.4.19-r2/work/m4-1.4.19/build-aux/missing' autoheader) ac-wrapper: autoheader: error: Unable to locate any usuable version of autoconf. I tried these versions: 9999 2.71 2.70 2.69 2.68 2.67 2.66 2.65 2.64 2.63 2.62 2.61 2.60 2.59 2.58 2.57 2.56 2.55 2.54 2.53 2.52 2.51 2.50 2.99 2.98 2.97 2.96 2.95 2.94 2.93 2.92 2.91 2.90 2.89 2.88 2.87 2.86 2.85 2.84 2.83 2.82 2.81 2.80 2.79 2.78 2.77 2.76 2.75 2.74 2.73 2.72 2.71 9999 With a base name of '/auto/vestec1-elixir/projects/biocev/mmokrejs/gentoo/usr/bin/autoheader'. make[2]: *** [Makefile:2524: config.hin] Error 1 make[2]: Leaving directory '/auto/vestec1-elixir/projects/biocev/mmokrejs/gentoo/var/tmp/portage/sys-devel/m4-1.4.19-r2/work/m4-1.4.19/lib' make[1]: *** [Makefile:2018: all-recursive] Error 1 make[1]: Leaving directory '/auto/vestec1-elixir/projects/biocev/mmokrejs/gentoo/var/tmp/portage/sys-devel/m4-1.4.19-r2/work/m4-1.4.19' make: *** [Makefile:1974: all] Error 2 * ERROR: sys-devel/m4-1.4.19-r2::gentoo failed (compile phase): * emake failed * * If you need support, post the output of `emerge --info '=sys-devel/m4-1.4.19-r2::gentoo'`, * the complete build log and the output of `emerge -pqv '=sys-devel/m4-1.4.19-r2::gentoo'`. * The complete build log is located at '/auto/vestec1-elixir/projects/biocev/mmokrejs/gentoo/var/tmp/portage/sys-devel/m4-1.4.19-r2/temp/build.log'. * The ebuild environment file is located at '/auto/vestec1-elixir/projects/biocev/mmokrejs/gentoo/var/tmp/portage/sys-devel/m4-1.4.19-r2/temp/environment'. * Working directory: '/auto/vestec1-elixir/projects/biocev/mmokrejs/gentoo/var/tmp/portage/sys-devel/m4-1.4.19-r2/work/m4-1.4.19' * S: '/auto/vestec1-elixir/projects/biocev/mmokrejs/gentoo/var/tmp/portage/sys-devel/m4-1.4.19-r2/work/m4-1.4.19' * GNU info directory index is up-to-date. * IMPORTANT: config file '/auto/vestec1-elixir/projects/biocev/mmokrejs/gentoo/etc/hosts' needs updating. * See the CONFIGURATION FILES and CONFIGURATION FILES UPDATE TOOLS * sections of the emerge man page to learn how to update config files. Hmmmm, I was already afraid of this to happen. Running /auto/vestec1-elixir/projects/biocev/mmokrejs/gentoo/bin/bash ./bootstrap-prefix.sh "/auto/vestec1-elixir/projects/biocev/mmokrejs/gentoo" stage3 somewhere failed :( Details might be found in the build log: /auto/vestec1-elixir/projects/biocev/mmokrejs/gentoo/var/tmp/portage/sys-devel/m4-1.4.19-r2/temp/build.log I have no clue, really. Please find friendly folks in #gentoo-prefix on irc.gentoo.org, gentoo-alt@lists.gentoo.org mailing list, or file a bug at bugs.gentoo.org under Gentoo/Alt, Prefix Support. This is most inconvenient, and it crushed my ego. Sorry, I give up. Should you want to give it a try, there is /auto/vestec1-elixir/projects/biocev/mmokrejs/gentoo/stage3.log CHOST: x86_64-pc-linux-gnu IDENT: x86_64-rap-linux-debian11 $ $ find /auto/vestec1-elixir/projects/biocev/mmokrejs/gentoo -name autoconf /auto/vestec1-elixir/projects/biocev/mmokrejs/gentoo/usr/bin/autoconf ... $ $ grep autoconf stage3.log | grep merged >>> sys-devel/autoconf-wrapper-20221207-r1 merged. >>> sys-devel/autoconf-archive-2023.02.20 merged. $
Created attachment 866720 [details] stage1.log.bz2
Created attachment 866721 [details] stage2.log.bz2
Created attachment 866722 [details] stage3.log.bz2
Created attachment 866723 [details] m4.build.log.bz2
Created attachment 866724 [details] emerge.log.bz2
The order or packages is wrong. Here is from stage3.log the package order. Note sys-devel/autoconf-wrapper-20221207-r1 appears quite early but much further is sys-devel/m4-1.4.19-r2 and finally later on comes sys-devel/autoconf-2.71-r7 itself. Looks like sys-devel/m4-1.4.19-r2 should depend on sys-devel/autoconf . These are the packages that would be merged, in order: Calculating dependencies ... done! Dependency resolution took 3.73 s. [ebuild N ] sys-libs/ncurses-6.4_p20230401:0/6::gentoo USE="(split-usr) (tinfo) -ada -cxx -debug -doc (-gpm) -minimal -profile (-stack-realign) -static-libs -test -trace -verify-sig" 0 KiB [ebuild N ] virtual/libiconv-0-r2::gentoo 0 KiB [ebuild N ] sys-apps/sed-4.9::gentoo USE="-acl -nls (-selinux) -static -verify-sig" 0 KiB [ebuild N ] sys-apps/findutils-4.9.0-r2::gentoo USE="-nls (-selinux) -static -test -verify-sig" 1 999 KiB [ebuild N ] sys-devel/patch-2.7.6-r5::gentoo USE="-static -test -verify-sig -xattr" 0 KiB [ebuild N ] virtual/libintl-0-r2::gentoo 0 KiB [ebuild N ] sys-devel/autoconf-wrapper-20221207-r1::gentoo 4 KiB [ebuild N ] sec-keys/openpgp-keys-gentoo-release-20230329::gentoo USE="-test" 17 KiB [ebuild N ] dev-util/gperf-3.1-r1::gentoo 1 188 KiB [ebuild N ] dev-libs/libffi-3.4.4-r1:0/8::gentoo USE="-debug (-exec-static-trampoline) -pax-kernel -static-libs -test" 0 KiB [ebuild N ] dev-python/gentoo-common-1::gentoo 0 KiB [ebuild N ] app-misc/mime-types-2.1.54::gentoo USE="-nginx" 28 KiB [ebuild N ] sys-devel/autoconf-archive-2023.02.20::gentoo 663 KiB [ebuild N ] dev-python/ensurepip-pip-23.2.1::gentoo 2 038 KiB [ebuild N ] dev-python/ensurepip-setuptools-68.0.0::gentoo 786 KiB [ebuild N ] dev-util/re2c-2.2::gentoo USE="-debug -test" 1 427 KiB [ebuild N ] acct-group/root-0-r1::gentoo 0 KiB [ebuild N ] dev-lang/python-exec-conf-2.4.6:2::gentoo PYTHON_TARGETS="python3_11 -pypy3 -python3_10 -python3_12" 86 KiB [ebuild N ] acct-group/portage-0-r1::gentoo 0 KiB [ebuild N ] sys-devel/automake-wrapper-20221207::gentoo 0 KiB [ebuild N ] dev-util/pkgconf-1.8.1:0/3::gentoo USE="-test" 296 KiB [ebuild N ] app-arch/xz-utils-5.4.3::gentoo USE="extra-filters (split-usr) -doc -nls -static-libs -verify-sig" 0 KiB [ebuild N ] virtual/libcrypt-2-r1:0/2::gentoo USE="-static-libs" 0 KiB [ebuild N ] sys-libs/libseccomp-2.5.4::gentoo USE="(-experimental-loong) -python -static-libs -test" PYTHON_TARGETS="python3_11 -python3_10" 623 KiB [ebuild N ] dev-libs/popt-1.19::gentoo USE="-nls -static-libs" 583 KiB [ebuild N ] app-alternatives/awk-4::gentoo USE="gawk (split-usr) -busybox -mawk -nawk" 0 KiB [ebuild N ] virtual/os-headers-0-r2::gentoo 0 KiB [ebuild N ] virtual/pkgconfig-2-r1::gentoo 0 KiB [ebuild N ] dev-lang/python-exec-2.4.10:2::gentoo USE="(native-symlinks) -test" PYTHON_TARGETS="(pypy3) (python3_10) (python3_11) (python3_12)" 83 KiB [ebuild N ] acct-user/portage-0-r2::gentoo 0 KiB [ebuild N ] dev-python/ensurepip-wheels-100::gentoo 0 KiB [ebuild N ] sys-libs/readline-8.2_p1:0/8::gentoo USE="(split-usr) (unicode) -static-libs -utils -verify-sig" 0 KiB [ebuild N ] sys-devel/m4-1.4.19-r2::gentoo USE="-examples -nls -verify-sig" 0 KiB [ebuild N ] dev-libs/libxml2-2.11.4:2::gentoo USE="ftp -debug -examples -icu -lzma -python -readline -static-libs -test" PYTHON_TARGETS="python3_11 -python3_10 -python3_12" 2 566 KiB [ebuild N ] dev-libs/libltdl-2.4.7-r1::gentoo USE="-static-libs" 993 KiB [ebuild N ] app-portage/portage-utils-0.96.1::gentoo USE="openmp -qmanifest -qtegrity -static" 1 765 KiB [ebuild N ] app-arch/bzip2-1.0.8-r4:0/1::gentoo USE="(split-usr) -static -static-libs -verify-sig" 792 KiB [ebuild N ] app-alternatives/bzip2-1::gentoo USE="reference (split-usr) -lbzip2 -pbzip2" 0 KiB [ebuild N ] sys-apps/file-5.45::gentoo USE="bzip2 seccomp zlib -lzip -lzma -python -static-libs -verify-sig -zstd" PYTHON_TARGETS="python3_11 -python3_10" 1 218 KiB [ebuild N ] dev-libs/libpcre2-10.42-r1:0/3::gentoo USE="bzip2 jit pcre16 (split-usr) unicode zlib -libedit -pcre32 -readline -static-libs -valgrind -verify-sig" 1 758 KiB [ebuild N ] app-arch/unzip-6.0_p27-r1::gentoo USE="bzip2 (unicode) -natspec" 1 369 KiB [ebuild N ] sys-apps/util-linux-2.39.1::gentoo USE="cramfs hardlink logger ncurses (split-usr) suid (unicode) -audit -build -caps -cryptsetup -fdformat -kill -magic -nls (-pam) -python -readline (-rtas) (-selinux) -slang -static-libs -su (-systemd) -test -tty-helpers -udev -verify-sig" PYTHON_TARGETS="python3_11 -python3_10" 8 156 KiB [ebuild N ] app-arch/tar-1.35::gentoo USE="-acl -minimal -nls (-selinux) -verify-sig -xattr" 2 263 KiB [ebuild N ] app-alternatives/tar-0::gentoo USE="gnu (split-usr) -libarchive" 0 KiB [ebuild N ] app-arch/gzip-1.12-r4::gentoo USE="-pic -static -verify-sig" 807 KiB [ebuild N ] app-alternatives/gzip-0::gentoo USE="reference (split-usr) -pigz" 0 KiB [ebuild N ] dev-lang/perl-5.38.0-r1:0/5.38::gentoo USE="-berkdb -debug -doc -gdbm -ithreads -minimal -quadmath" 13 386 KiB [ebuild N ] virtual/perl-Data-Dumper-2.188.0::gentoo 0 KiB [ebuild N ] virtual/perl-Encode-3.190.0::gentoo 0 KiB [ebuild N ] virtual/perl-CPAN-2.360.0::gentoo 0 KiB [ebuild N ] virtual/perl-Test-Harness-3.440.0-r1::gentoo 0 KiB [ebuild N ] perl-core/File-Temp-0.231.100::gentoo 76 KiB [ebuild N ] virtual/perl-File-Temp-0.231.100::gentoo 0 KiB [ebuild N ] sys-devel/autoconf-2.71-r7:2.71::gentoo USE="-emacs" 1 263 KiB
$ find /auto/vestec1-elixir/projects/biocev/mmokrejs/gentoo/ -name autoconf* | sort | grep -v '/var/db/repos/' | grep -v '/var/db/pkg' | grep -v '/var/tmp/portage' | grep -v '/var/cache/distfiles' /auto/vestec1-elixir/projects/biocev/mmokrejs/gentoo/usr/bin/autoconf /auto/vestec1-elixir/projects/biocev/mmokrejs/gentoo/usr/share/doc/autoconf-archive-2023.02.20 /auto/vestec1-elixir/projects/biocev/mmokrejs/gentoo/usr/share/info/autoconf-archive.info.bz2 /auto/vestec1-elixir/projects/biocev/mmokrejs/gentoo/usr/share/info/autoconf-archive.info-1.bz2 /auto/vestec1-elixir/projects/biocev/mmokrejs/gentoo/usr/share/info/autoconf-archive.info-2.bz2 /auto/vestec1-elixir/projects/biocev/mmokrejs/gentoo/usr/share/info/autoconf-archive.info-3.bz2 /auto/vestec1-elixir/projects/biocev/mmokrejs/gentoo/usr/share/info/autoconf-archive.info-4.bz2 $ The following obviously fails then. $ /auto/vestec1-elixir/projects/biocev/mmokrejs/gentoo/usr/lib64/misc/ac-wrapper.sh ac-wrapper: ac-wrapper.sh: error: Unable to locate any usuable version of autoconf. I tried these versions: 9999 2.71 2.70 2.69 2.68 2.67 2.66 2.65 2.64 2.63 2.62 2.61 2.60 2.59 2.58 2.57 2.56 2.55 2.54 2.53 2.52 2.51 2.50 2.99 2.98 2.97 2.96 2.95 2.94 2.93 2.92 2.91 2.90 2.89 2.88 2.87 2.86 2.85 2.84 2.83 2.82 2.81 2.80 2.79 2.78 2.77 2.76 2.75 2.74 2.73 2.72 2.71 9999 With a base name of '/auto/vestec1-elixir/projects/biocev/mmokrejs/gentoo/usr/lib64/misc/ac-wrapper.sh'. $
I added to $prefix/var/db/repos/gentoo/sys-devel/m4/m4-1.4.19-r2.ebuild under DEPEND sys-devel/autoconf but ended up with circular deps. USE=-acl -berkdb -fortran -gdbm -git -libcxx -nls -pcre -python -qmanifest -qtegrity -readline -sanitize bootstrap clang internal-glib PKG=app-shells/bash !!! BINPKG_COMPRESS unsupported zstd. Missing package: app-arch/zstd These are the packages that would be merged, in order: Calculating dependencies... done! Dependency resolution took 3.39 s. /var/db/repos/gentoo/sys-devel/m4/m4-1.4.19-r2.ebuild [nomerge ] app-shells/bash-5.2_p15-r6::gentoo USE="net (readline) -afs -bashlogger -examples -mem-scramble -nls -pgo -plugins -verify-sig" [nomerge ] sys-devel/bison-3.8.2-r2::gentoo USE="-examples -nls -static -test -verify-sig" [nomerge ] sys-devel/flex-2.6.4-r6::gentoo USE="-nls -static -test" [ebuild N ] app-alternatives/lex-0-r1::gentoo USE="flex -reflex" 0 KiB [ebuild N ] sys-devel/flex-2.6.4-r6::gentoo USE="-nls -static -test" 0 KiB [ebuild N ] app-alternatives/yacc-1-r2::gentoo USE="bison -byacc -reference" 0 KiB [ebuild N ] sys-devel/bison-3.8.2-r2::gentoo USE="-examples -nls -static -test -verify-sig" 0 KiB [nomerge ] sys-devel/bison-3.8.2-r2::gentoo USE="-examples -nls -static -test -verify-sig" [nomerge ] sys-devel/gettext-0.22-r1::gentoo USE="cxx ncurses openmp (xattr) -acl -doc -emacs -git -java -nls -static-libs -verify-sig" [nomerge ] dev-libs/expat-2.5.0::gentoo USE="unicode -examples -static-libs -test" [nomerge ] sys-devel/autoconf-2.71-r7:2.71::gentoo USE="-emacs" [nomerge ] dev-lang/perl-5.38.0-r1:0/5.38::gentoo USE="-berkdb -debug -doc -gdbm -ithreads -minimal -quadmath" [nomerge ] app-admin/perl-cleaner-2.31::gentoo USE="-pkgcore" [nomerge ] sys-apps/portage-3.0.49-r2::gentoo USE="(ipc) -apidoc -build -debug -doc -gentoo-dev (-native-extensions) -rsync-verify (-selinux) -test -xattr" PYTHON_TARGETS="python3_11 -pypy3 -python3_10 -python3_12" [nomerge ] dev-python/setuptools-68.0.0-r1::gentoo USE="-test" PYTHON_TARGETS="python3_11 -pypy3 -python3_10 -python3_12" [ebuild N ] dev-python/setuptools-scm-7.1.0::gentoo USE="-test" PYTHON_TARGETS="python3_11 -pypy3 -python3_10 -python3_12" 0 KiB [ebuild N ] dev-python/certifi-3021.3.16-r3::gentoo USE="-test" PYTHON_TARGETS="python3_11 -pypy3 -python3_10 -python3_12" 0 KiB [ebuild N ] app-admin/perl-cleaner-2.31::gentoo USE="-pkgcore" 0 KiB [ebuild N ] sys-apps/portage-3.0.49-r2::gentoo USE="(ipc) -apidoc -build -debug -doc -gentoo-dev (-native-extensions) -rsync-verify (-selinux) -test -xattr" PYTHON_TARGETS="python3_11 -pypy3 -python3_10 -python3_12" 0 KiB [ebuild N ] sys-apps/sandbox-2.37::gentoo USE="nnp" 0 KiB [ebuild N ] app-arch/zstd-1.5.5:0/1::gentoo USE="lzma (split-usr) zlib -lz4 -static-libs -test" 0 KiB [ebuild N ] app-misc/pax-utils-1.3.7::gentoo USE="-caps -man -python (-seccomp) -test" PYTHON_SINGLE_TARGET="python3_11 -python3_10" 0 KiB [ebuild N ] dev-util/meson-1.2.0::gentoo USE="(-test)" PYTHON_TARGETS="python3_11 -pypy3 -python3_10 -python3_12" 0 KiB [ebuild N ] dev-python/setuptools-68.0.0-r1::gentoo USE="-test" PYTHON_TARGETS="python3_11 -pypy3 -python3_10 -python3_12" 0 KiB [nomerge ] sys-apps/portage-3.0.49-r2::gentoo USE="(ipc) -apidoc -build -debug -doc -gentoo-dev (-native-extensions) -rsync-verify (-selinux) -test -xattr" PYTHON_TARGETS="python3_11 -pypy3 -python3_10 -python3_12" [nomerge ] dev-lang/python-3.11.4:3.11::gentoo USE="ensurepip ncurses sqlite ssl -bluetooth -build -debug -examples -gdbm -libedit -lto -pgo -readline -test -tk -valgrind -verify-sig" [ebuild N ] dev-db/sqlite-3.42.0:3::gentoo USE="-debug -doc -icu -readline -secure-delete -static-libs -tcl -test -tools" 0 KiB [ebuild N ] dev-lang/tcl-8.6.13-r1:0/8.6::gentoo USE="threads -debug" 0 KiB [ebuild N ] app-crypt/libb2-0.98.1-r3::gentoo USE="openmp -native-cflags -static-libs" 0 KiB [ebuild N ] sys-devel/gettext-0.22-r1::gentoo USE="cxx ncurses openmp (xattr) -acl -doc -emacs -git -java -nls -static-libs -verify-sig" 0 KiB [ebuild N ] dev-libs/expat-2.5.0::gentoo USE="unicode -examples -static-libs -test" 0 KiB [nomerge ] sys-devel/bison-3.8.2-r2::gentoo USE="-examples -nls -static -test -verify-sig" [ebuild N ] sys-devel/m4-1.4.19-r2::gentoo USE="-examples -nls -verify-sig" 0 KiB [nomerge ] dev-python/setuptools-scm-7.1.0::gentoo USE="-test" PYTHON_TARGETS="python3_11 -pypy3 -python3_10 -python3_12" [nomerge ] dev-python/setuptools-68.0.0-r1::gentoo USE="-test" PYTHON_TARGETS="python3_11 -pypy3 -python3_10 -python3_12" [nomerge ] dev-lang/python-3.11.4:3.11::gentoo USE="ensurepip ncurses sqlite ssl -bluetooth -build -debug -examples -gdbm -libedit -lto -pgo -readline -test -tk -valgrind -verify-sig" [nomerge ] dev-libs/expat-2.5.0::gentoo USE="unicode -examples -static-libs -test" [ebuild N ] sys-devel/libtool-2.4.7-r1:2::gentoo USE="-vanilla" 0 KiB [ebuild N ] sys-devel/automake-1.16.5-r1:1.16::gentoo USE="-test" 0 KiB [ebuild N ] sys-devel/autoconf-2.71-r7:2.71::gentoo USE="-emacs" 0 KiB [ebuild N ] dev-python/wheel-0.41.0::gentoo USE="-test" PYTHON_TARGETS="python3_11 -pypy3 -python3_10 -python3_12" 0 KiB [ebuild N ] dev-python/nspektr-0.4.0::gentoo USE="-test" PYTHON_TARGETS="python3_11 -pypy3 -python3_10 -python3_12" 0 KiB [ebuild N ] dev-python/packaging-23.1::gentoo USE="-test" PYTHON_TARGETS="python3_11 -pypy3 -python3_10 -python3_12" 0 KiB [ebuild N ] dev-python/pyparsing-3.1.1::gentoo USE="-examples -test" PYTHON_TARGETS="python3_11 -pypy3 -python3_10 -python3_12" 0 KiB [ebuild N ] dev-python/typing-extensions-4.7.1::gentoo USE="-test" PYTHON_TARGETS="python3_11 -pypy3 -python3_10 -python3_12" 0 KiB [nomerge ] dev-python/certifi-3021.3.16-r3::gentoo USE="-test" PYTHON_TARGETS="python3_11 -pypy3 -python3_10 -python3_12" [nomerge ] dev-python/setuptools-68.0.0-r1::gentoo USE="-test" PYTHON_TARGETS="python3_11 -pypy3 -python3_10 -python3_12" [ebuild N ] dev-python/platformdirs-3.10.0::gentoo USE="-test" PYTHON_TARGETS="python3_11 -pypy3 -python3_10 -python3_12" 0 KiB [ebuild N ] dev-python/ordered-set-4.1.0::gentoo USE="-test" PYTHON_TARGETS="python3_11 -pypy3 -python3_10 -python3_12" 0 KiB [ebuild N ] dev-python/jaraco-text-3.11.1-r1::gentoo USE="-test" PYTHON_TARGETS="python3_11 -pypy3 -python3_10 -python3_12" 0 KiB [ebuild N ] dev-python/jaraco-functools-3.8.0::gentoo USE="-test" PYTHON_TARGETS="python3_11 -pypy3 -python3_10 -python3_12" 0 KiB [ebuild N ] dev-python/jaraco-context-4.3.0::gentoo USE="-test" PYTHON_TARGETS="python3_11 -pypy3 -python3_10 -python3_12" 0 KiB [ebuild N ] dev-python/more-itertools-10.0.0::gentoo USE="-doc -test" PYTHON_TARGETS="python3_11 -pypy3 -python3_10 -python3_12" 0 KiB [ebuild N ] dev-python/flit-core-3.9.0::gentoo USE="-test" PYTHON_TARGETS="python3_11 -pypy3 -python3_10 -python3_12" 0 KiB [ebuild N ] dev-python/gpep517-13::gentoo USE="-test" PYTHON_TARGETS="python3_11 -pypy3 -python3_10 -python3_12" 0 KiB [ebuild N ] dev-python/installer-0.7.0::gentoo USE="-test" PYTHON_TARGETS="python3_11 -pypy3 -python3_10 -python3_12" 0 KiB [ebuild N ] dev-python/tomli-2.0.1-r1::gentoo USE="-test" PYTHON_TARGETS="python3_11 -pypy3 -python3_10 -python3_12" 0 KiB [nomerge ] sys-apps/sandbox-2.37::gentoo USE="nnp" [nomerge ] app-misc/pax-utils-1.3.7::gentoo USE="-caps -man -python (-seccomp) -test" PYTHON_SINGLE_TARGET="python3_11 -python3_10" [ebuild N ] dev-util/meson-format-array-0::gentoo PYTHON_TARGETS="python3_11 -python3_10 -python3_12" 0 KiB [ebuild N ] dev-util/ninja-1.11.1-r2::gentoo USE="-doc -emacs -test" 0 KiB [ebuild N ] dev-lang/python-3.11.4:3.11::gentoo USE="ensurepip ncurses sqlite ssl -bluetooth -build -debug -examples -gdbm -libedit -lto -pgo -readline -test -tk -valgrind -verify-sig" 0 KiB [nomerge ] dev-python/certifi-3021.3.16-r3::gentoo USE="-test" PYTHON_TARGETS="python3_11 -pypy3 -python3_10 -python3_12" [nomerge ] app-misc/ca-certificates-20230311.3.90::gentoo USE="-cacert" [nomerge ] sys-apps/debianutils-5.8::gentoo USE="installkernel -static" [ebuild N ] sys-kernel/installkernel-gentoo-7::gentoo USE="-grub" 0 KiB [ebuild N ] sys-apps/debianutils-5.8::gentoo USE="installkernel -static" 0 KiB [ebuild N ] app-misc/ca-certificates-20230311.3.90::gentoo USE="-cacert" 0 KiB [ebuild N ] app-shells/bash-5.2_p15-r6::gentoo USE="net (readline) -afs -bashlogger -examples -mem-scramble -nls -pgo -plugins -verify-sig" 0 KiB Total: 44 packages (44 new), Size of downloads: 0 KiB * Error: circular dependencies: (sys-devel/autoconf-2.71-r7:2.71/2.71::gentoo, ebuild scheduled for merge) depends on (sys-devel/m4-1.4.19-r2:0/0::gentoo, ebuild scheduled for merge) (buildtime) (sys-devel/autoconf-2.71-r7:2.71/2.71::gentoo, ebuild scheduled for merge) (buildtime) * Note that circular dependencies can often be avoided by temporarily * disabling USE flags that trigger optional dependencies.
My FIX: I added 4 lines with zlib bzip2 perl autoconf to bootstrap-prefix.sh . Maybe zlib was not needed but I was not certain whether perl build failed due to missing zlib.h or bzlib.h due to some TTY controling chars I was not sure if it is bzlib.h or zlib.h. 2078 # avoid circular deps with sys-libs/pam, bug#712020 2079 pkgs=( 2080 sys-apps/attr 2081 sys-libs/libcap 2082 sys-libs/libxcrypt 2083 sys-libs/zlib 2084 app-arch/bzip2 2085 dev-lang/perl 2086 sys-devel/autoconf 2087 ) 2088 BOOTSTRAP_RAP=yes \ 2089 USE="${USE} -pam" \ 2090 pre_emerge_pkgs --nodeps "${pkgs[@]}" || return 1 2091 else
So here is what helped me go forward and succeed in get RAP installed: --- bootstrap-prefix.sh.ori 2023-08-02 12:43:04.671112000 +0200 +++ gentoo/bootstrap-prefix.sh 2023-08-02 16:17:00.979157000 +0200 @@ -2080,6 +2080,11 @@ sys-apps/attr sys-libs/libcap sys-libs/libxcrypt + sys-libs/zlib + app-arch/bzip2 + dev-lang/perl + sys-devel/autoconf + sys-devel/autoconf-wrapper ) BOOTSTRAP_RAP=yes \ USE="${USE} -pam" \ @@ -2206,6 +2211,8 @@ # e.g. bug #901101 export USE="-git -crypt -http2" + USE="-readline -nls" emerge -uN1 sys-devel/autoconf sys-devel/autoconf-wrapper + # Portage should figure out itself what it needs to do, if anything. einfo "running emerge -uDNv system" estatus "stage3: emerge -uDNv system" I did not investigate whether either zlib or bzip2 was unnecessary. Also, one of the two places where sys-devel/autoconf-wrapper is installed is also possibly unnecessary but the "emerge -uN1" makes it a cosmetic issue.
The m4 build system should not be calling autoheader at all. There is code in the gentoo ebuild specifically to avoid this: # touch generated files after patching m4, to avoid activating maintainer # mode # remove when loong-fix-build.patch is no longer necessary touch ./aclocal.m4 ./lib/config.hin ./configure ./doc/stamp-vti || die find . -name Makefile.in -exec touch {} + || die You should focus on figuring out why maintainer mode is being triggered on prefix.
