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Bug 909435 - kde-apps/cantor-23.04.2 failed to emerge - SANDBOX ACCESS
Summary: kde-apps/cantor-23.04.2 failed to emerge - SANDBOX ACCESS
Status: UNCONFIRMED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: Normal normal
Assignee: Gentoo KDE team
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2023-07-01 10:52 UTC by Leonid Kopylov
Modified: 2023-07-02 02:12 UTC (History)
2 users (show)

See Also:
Package list:
Runtime testing required: ---


Attachments
build.log (build.log,15.63 KB, text/plain)
2023-07-01 10:52 UTC, Leonid Kopylov
Details

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Description Leonid Kopylov 2023-07-01 10:52:16 UTC
# emerge -pvq =kde-apps/cantor-23.04.2
[ebuild  N    ] kde-apps/cantor-23.04.2  USE="analitza handbook julia lua postscript python qalculate -R -debug -test" LUA_SINGLE_TARGET="luajit" PYTHON_SINGLE_TARGET="python3_11 -python3_10"

# emerge --info =kde-apps/cantor-23.04.2
Portage 3.0.49 (python 3.12.0-beta-3, default/linux/amd64/17.1/desktop/gnome/systemd/merged-usr, gcc-13, glibc-2.37-r3, 6.4.0-gentoo-amd64 x86_64)
=================================================================
                         System Settings
=================================================================
System uname: Linux-6.4.0-gentoo-amd64-x86_64-12th_Gen_Intel-R-_Core-TM-_i7-12700-with-glibc2.37
KiB Mem:   131649272 total, 111115272 free
KiB Swap:    8388604 total,   8388604 free
Timestamp of repository gentoo: Sat, 01 Jul 2023 08:00:01 +0000
Head commit of repository gentoo: 9d803a9b4c56fbebebf4440ea8e138fbe0c5eecb
Timestamp of repository brave-overlay: Fri, 30 Jun 2023 13:33:43 +0000
Head commit of repository brave-overlay: 57619b8b8ccaa200366ac94f6dcd6d85306c914d

Timestamp of repository darkelf: Sat, 10 Jun 2023 10:33:49 +0000
Head commit of repository darkelf: aaeb552cd5e9a199a0adc5de24c83ae2ea5c2818

Timestamp of repository guru: Sat, 01 Jul 2023 07:32:01 +0000
Head commit of repository guru: cb6967af3ac45b3eef883196450b1b86aa45c529

sh bash 5.2_p15-r6
ld GNU ld (Gentoo 2.40 p5) 2.40.0
ccache version 4.8.2 [enabled]
app-misc/pax-utils:        1.3.7::gentoo
app-shells/bash:           5.2_p15-r6::gentoo
dev-java/java-config:      2.3.1-r1::gentoo
dev-lang/perl:             5.36.1-r2::gentoo
dev-lang/python:           3.10.12::gentoo, 3.11.4::gentoo, 3.12.0_beta3::gentoo
dev-lang/rust:             1.69.0-r1::gentoo
dev-util/ccache:           4.8.2::gentoo
dev-util/cmake:            3.26.4-r1::gentoo
dev-util/meson:            1.1.1::gentoo
sys-apps/baselayout:       2.13-r1::gentoo
sys-apps/sandbox:          2.33::gentoo
sys-apps/systemd:          253.5::gentoo
sys-devel/autoconf:        2.13-r8::gentoo, 2.71-r6::gentoo
sys-devel/automake:        1.16.5-r1::gentoo
sys-devel/binutils:        2.40-r5::gentoo
sys-devel/binutils-config: 5.5::gentoo
sys-devel/clang:           15.0.7-r3::gentoo, 16.0.6::gentoo
sys-devel/gcc:             12.3.1_p20230623::gentoo, 13.1.1_p20230527::gentoo
sys-devel/gcc-config:      2.11::gentoo
sys-devel/libtool:         2.4.7-r1::gentoo
sys-devel/lld:             15.0.7::gentoo
sys-devel/llvm:            14.0.6-r4::gentoo, 15.0.7-r3::gentoo, 16.0.6::gentoo
sys-devel/make:            4.4.1-r1::gentoo
sys-kernel/linux-headers:  6.4::gentoo (virtual/os-headers)
sys-libs/glibc:            2.37-r3::gentoo
Repositories:

gentoo
    location: /var/db/repos/gentoo
    sync-type: rsync
    sync-uri: rsync://server.kopylovs.net/gentoo-portage
    priority: -1000
    volatile: False
    sync-rsync-verify-jobs: 1
    sync-rsync-verify-metamanifest: yes
    sync-rsync-extra-opts:
    sync-rsync-verify-max-age: 24

brave-overlay
    location: /var/db/repos/brave-overlay
    sync-type: git
    sync-uri: https://github.com/gentoo-mirror/brave-overlay.git
    masters: gentoo
    volatile: False

darkelf
    location: /var/db/repos/darkelf
    sync-type: git
    sync-uri: https://github.com/gentoo-mirror/darkelf.git
    masters: gentoo
    volatile: False

guru
    location: /var/db/repos/guru
    sync-type: git
    sync-uri: https://github.com/gentoo-mirror/guru.git
    masters: gentoo
    volatile: False

ACCEPT_KEYWORDS="amd64 ~amd64"
ACCEPT_LICENSE="* -@EULA android AnyDesk-TOS geekbench google-chrome microsoft-edge Microsoft-vscode NVIDIA-CUDA OPERA-2018 PUEL-11 RAR TeamViewer Vivaldi"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=native -O2 -pipe -fomit-frame-pointer"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/lib64/libreoffice/program/sofficerc /usr/share/config /usr/share/gnupg/qualified.txt"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php8.2/ext-active/ /etc/php/cgi-php8.2/ext-active/ /etc/php/cli-php8.2/ext-active/ /etc/php/fpm-php8.2/ext-active/ /etc/php/phpdbg-php8.2/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c"
CXXFLAGS="-march=native -O2 -pipe -fomit-frame-pointer"
DISTDIR="/var/cache/distfiles"
ENV_UNSET="CARGO_HOME DBUS_SESSION_BUS_ADDRESS DISPLAY GDK_PIXBUF_MODULE_FILE GOBIN GOPATH PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR XDG_STATE_HOME"
FCFLAGS="-march=native -O2 -pipe -fomit-frame-pointer"
FEATURES="assume-digests binpkg-docompress binpkg-dostrip binpkg-logs binpkg-multi-instance buildpkg-live ccache config-protect-if-modified distlocks ebuild-locks fixlafiles ipc-sandbox merge-sync multilib-strict network-sandbox news parallel-fetch pid-sandbox preserve-libs protect-owned qa-unresolved-soname-deps sandbox sfperms strict strict-keepdir unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync warn-on-large-env xattr"
FFLAGS="-march=native -O2 -pipe -fomit-frame-pointer"
GENTOO_MIRRORS="https://mirror.isoc.org.il/pub/gentoo/ https://mirror.eu.oneandone.net/linux/distributions/gentoo/gentoo/"
LANG="en_US.utf8"
LC_ALL="en_US.UTF-8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
LEX="flex"
MAKEOPTS="-j10"
PKGDIR="/var/cache/binpkgs"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git"
PORTAGE_TMPDIR="/var/tmp"
SHELL="/bin/bash"
USE="X a52 aac accessibility acl acpi alsa amd64 audit bash-completion berkdb bidi bluetooth branding brotli btrfs bzip2 cairo cdda cdr cgi cli colord crypt cryptsetup cuda cups curl dbus designer device-mapper doc dri drm dts dvd dvdr eds emacs encode evdev evo examples exif experimental ffmpeg flac fortran fuse gamepad gdbm gif git gmp gnome gnome-keyring gnome-online-accounts gnutls go gpg gpm gstreamer gtk gtk-doc gui heif hscolour html http ibus iconv icu idn introspection iodbc ios ipv6 jack java jemalloc joystick jpeg json kde kerberos keyring lcms ldap libnotify libtirpc lm-sensors lua lvm lz4 lzma lzo mad man mbedtls mng mp3 mp4 mpeg mpi multilib multimedia mysql nas nautilus ncurses netlink network networkmanager nfs nls nptl nss nvenc odbc offensive ogg opencl opengl openmp openssl pam pango pcap pcre pdf perl pkcs11 plasma plugins png policykit postgres ppds pulseaudio python qml qt5 qt6 readline redis samba sasl screencast sdl seccomp semantic-desktop snmp sound source speech spell sqlite ssl startup-notification svg symlink sysprof systemd tcl tcpd telemetry test-rust threads tiff tk tools tpm tracker truetype udev udisks unicode unwind upnp upower usb utils v4l vala vdpau vim-syntax vnc vorbis vulkan wayland webengine webkit webp wifi wxwidgets x264 xattr xcb xft xinerama xml xv xvid yaml zeroconf zip zlib zstd" ABI_X86="64 32" ADA_TARGET="gnat_2021" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="karbon sheets stage words" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="aes avx avx2 f16c fma3 mmx mmxext pclmul popcnt rdrand sha sse sse2 sse3 sse4_1 sse4_2 ssse3" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock greis isync itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 timing tsip tripmate tnt ublox ubx" GRUB_PLATFORMS="efi-64" INPUT_DEVICES="evdev joystick libinput" KERNEL="linux" L10N="en en-US he ru" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="nlpsolver scripting-beanshell scripting-javascript wiki-publisher" LUA_SINGLE_TARGET="lua5-1" LUA_TARGETS="lua5-1" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php8-1" POSTGRES_TARGETS="postgres12 postgres13" PYTHON_SINGLE_TARGET="python3_11" PYTHON_TARGETS="python3_11 python3_10 python3_12" RUBY_TARGETS="ruby30 ruby31 ruby32" VIDEO_CARDS="nvidia fbdev vesa" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq proto steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  ADDR2LINE, AR, ARFLAGS, AS, ASFLAGS, CC, CCLD, CONFIG_SHELL, CPP, CPPFLAGS, CTARGET, CXX, CXXFILT, ELFEDIT, EMERGE_DEFAULT_OPTS, EXTRA_ECONF, F77FLAGS, FC, GCOV, GPROF, INSTALL_MASK, LD, LFLAGS, LIBTOOL, LINGUAS, MAKE, MAKEFLAGS, NM, OBJCOPY, OBJDUMP, PORTAGE_BINHOST, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, RANLIB, READELF, RUSTFLAGS, SIZE, STRINGS, STRIP, YACC, YFLAGS
Comment 1 Leonid Kopylov 2023-07-01 10:52:28 UTC
Created attachment 864946 [details]
build.log
Comment 2 Sam James archtester Gentoo Infrastructure gentoo-dev Security 2023-07-01 10:53:53 UTC
Not Julia again...


-- Found Python3: /usr/include/python3.12 (found version "3.12.0") found components: Development Development.Module Development.Embed 
-- Found LuaJIT: /usr/lib64/libluajit-5.1.so  
 [31;01m*[0m [31;01mACCESS DENIED[0m:  fchmod:             /proc/self/fd/14
 [31;01m*[0m [31;01mACCESS DENIED[0m:  fchmod:             /proc/self/fd/14
 [31;01m*[0m [31;01mACCESS DENIED[0m:  fchmod:             /proc/self/fd/14
-- Found Julia: /usr/lib64/libjulia.so (found version "1.8.5") 
-- The following OPTIONAL packages have been found:
Comment 3 Mike Gilbert gentoo-dev 2023-07-02 00:06:32 UTC
Note that sys-apps/sandbox-2.33 added a fchmod wrapper, which is now catching this strange call.

VERSION 1.0
FORMAT: F - Function called
FORMAT: S - Access Status
FORMAT: P - Path as passed to function
FORMAT: A - Absolute Path (not canonical)
FORMAT: R - Canonical Path
FORMAT: C - Command Line

F: fchmod
S: deny
P: /proc/self/fd/14
A: /proc/self/fd/14
R: /memfd:julia-codegen (deleted)
C: /usr/bin/julia -E joinpath(match(r"(.*)(bin)",Sys.BINDIR).captures[1],"include","julia") 

F: fchmod
S: deny
P: /proc/self/fd/14
A: /proc/self/fd/14
R: /memfd:julia-codegen (deleted)
C: /usr/bin/julia -E using Libdl; abspath(dirname(Libdl.dlpath("libjulia"))) 

F: fchmod
S: deny
P: /proc/self/fd/14
A: /proc/self/fd/14
R: /memfd:julia-codegen (deleted)
C: /usr/bin/julia -E using Libdl; abspath(dirname(Libdl.dlpath("libjulia-internal")))
Comment 4 Michael Orlitzky gentoo-dev 2023-07-02 02:12:48 UTC
There's a slightly less insane way to find libjulia. See "Use in Makefiles" in,

  https://docs.julialang.org/en/v1/manual/embedding/

Outside of Gentoo, Julia aggresively rejects anything that could be considered a best practice, so these hacks are needed in upstream projects. But maybe the jl-config hack works better than the current one and will avoid the need to patch out bits of FindJulia.cmake.