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Bug 891435 - =sys-cluster/openmpi-4.1.4 should depend on sys-libs/binutils-libs:=
Summary: =sys-cluster/openmpi-4.1.4 should depend on sys-libs/binutils-libs:=
Status: UNCONFIRMED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: Normal normal
Assignee: Gentoo Cluster Team
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2023-01-20 01:33 UTC by Daniel M. Weeks
Modified: 2024-02-26 15:59 UTC (History)
1 user (show)

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Runtime testing required: ---

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Description Daniel M. Weeks 2023-01-20 01:33:34 UTC 
>>> package: sys-libs/binutils-libs-2.40-r1
 *  - /usr/lib64/libbfd-2.37.gentoo-sys-libs-binutils-libs-mt-def.so
 *      used by /usr/lib64/libmca_common_ucx.so.40.30.2 (sys-cluster/openmpi-4.1.4)
 *      used by /usr/lib64/openmpi/mca_atomic_ucx.so (sys-cluster/openmpi-4.1.4)
 *      used by /usr/lib64/openmpi/mca_osc_ucx.so (sys-cluster/openmpi-4.1.4)
 *      used by /usr/lib64/openmpi/mca_pml_ucx.so (sys-cluster/openmpi-4.1.4)
 *      used by /usr/lib64/openmpi/mca_spml_ucx.so (sys-cluster/openmpi-4.1.4)
 *      used by /usr/lib64/openmpi/mca_sshmem_ucx.so (sys-cluster/openmpi-4.1.4)


This is a result of ucx linking against libbfd. openmpi components that link against ucx directly link any of its dependencies as well.

Since ucx has USE=numa, and this results in ucx libraries linking against libnuma, this presents a similar problem since it's possible to build ucx with numa, build openmpi, and then rebuild ucx without numa and get preserved libraries. (I think the only solution to this is for openmpi to have a dependency on sys-cluster/ucx[numa].)

(Really openmpi needs to directly depend on /anything/ ucx links against.)

Reproducible: Always
Comment 1 Daniel M. Weeks 2024-02-26 15:59:27 UTC 
Still seeing this with sys-cluster/openmpi-4.1.6 after a sys-libs/binutils-libs update:

>>> package: sys-libs/binutils-libs-2.42-r1
 *  - /usr/lib64/libbfd-2.41.0.gentoo-sys-libs-binutils-libs-mt-def.so
 *      used by /usr/lib64/libmca_common_ucx.so.40.30.2 (sys-cluster/openmpi-4.1.6)
 *      used by /usr/lib64/openmpi/mca_atomic_ucx.so (sys-cluster/openmpi-4.1.6)
 *      used by /usr/lib64/openmpi/mca_osc_ucx.so (sys-cluster/openmpi-4.1.6)
 *      used by /usr/lib64/openmpi/mca_pml_ucx.so (sys-cluster/openmpi-4.1.6)
 *      used by /usr/lib64/openmpi/mca_spml_ucx.so (sys-cluster/openmpi-4.1.6)
 *      used by /usr/lib64/openmpi/mca_sshmem_ucx.so (sys-cluster/openmpi-4.1.6)