828976 – sys-block/libfabric-1.11.2-r2 - /.../ld: .../libfabric.so: undefined reference to pthread_yield

Bug 828976 - sys-block/libfabric-1.11.2-r2 - /.../ld: .../libfabric.so: undefined reference to pthread_yield

Summary: sys-block/libfabric-1.11.2-r2 - /.../ld: .../libfabric.so: undefined referenc...

Status:	CONFIRMED

Alias:	None

Product:	Gentoo Linux
Classification:	Unclassified
Component:	Current packages (show other bugs)
Hardware:	All Linux

Importance:	Normal normal (vote)
Assignee:	Gentoo musl team

URL:
Whiteboard:
Keywords:

Duplicates (1):	895062 (view as bug list)
Depends on:
Blocks:

Reported:	2021-12-12 10:08 UTC by Toralf Förster
Modified:	2024-04-06 16:50 UTC (History)
CC List:	3 users (show)

See Also:
Package list:
Runtime testing required:	---

Attachments
emerge-info.txt (emerge-info.txt,14.82 KB, text/plain) 2021-12-12 10:08 UTC, Toralf Förster	Details
emerge-history.txt (emerge-history.txt,129.91 KB, text/plain) 2021-12-12 10:08 UTC, Toralf Förster	Details
environment (environment,67.83 KB, text/plain) 2021-12-12 10:08 UTC, Toralf Förster	Details
etc.portage.tar.bz2 (etc.portage.tar.bz2,11.49 KB, application/x-bzip) 2021-12-12 10:08 UTC, Toralf Förster	Details
logs.tar.bz2 (logs.tar.bz2,11.85 KB, application/x-bzip) 2021-12-12 10:09 UTC, Toralf Förster	Details
sys-block:libfabric-1.11.2:20211211-215840.log (sys-block:libfabric-1.11.2:20211211-215840.log,170.82 KB, text/plain) 2021-12-12 10:09 UTC, Toralf Förster	Details
temp.tar.bz2 (temp.tar.bz2,28.21 KB, application/x-bzip) 2021-12-12 10:09 UTC, Toralf Förster	Details
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Description Toralf Förster gentoo-dev

2021-12-12 10:08:53 UTC

too long lines were shrinked:

/bin/sh ./libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc -Wall -O2 -DNDEBUG -pipe -march=native -fno-diagnostics-color -O2  -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0    -o util/fi_pingpong util/pingpong.o src/libfabric.la -ldl -ldl -latomic -lpthread -ldl    
/bin/sh ./libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc -Wall -O2 -DNDEBUG -pipe -march=native -fno-diagnostics-color -O2  -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0    -o util/fi_strerror util/strerror.o src/libfabric.la -ldl -ldl -latomic -lpthread -ldl    
libtool: link: x86_64-gentoo-linux-musl-gcc -Wall -O2 -DNDEBUG -pipe -march=native -fno-diagnostics-color -O2 -Wl,-O1 -Wl,--defsym=__gentoo_check_ldflags__=0 -o util/.libs/fi_strerror util/strerror.o  -Wl,--as-needed src/.libs/libfabric.so //usr/lib/gcc/x86_64-gentoo-linux-musl/11.2.1/libatomic.so -
libtool: link: x86_64-gentoo-linux-musl-gcc -Wall -O2 -DNDEBUG -pipe -march=native -fno-diagnostics-color -O2 -Wl,-O1 -Wl,--defsym=__gentoo_check_ldflags__=0 -o util/.libs/fi_pingpong util/pingpong.o  -Wl,--as-needed src/.libs/libfabric.so //usr/lib/gcc/x86_64-gentoo-linux-musl/11.2.1/libatomic.so -
/usr/lib/gcc/x86_64-gentoo-linux-musl/11.2.1/../../../../x86_64-gentoo-linux-musl/bin/ld: src/.libs/libfabric.so: undefined reference to `pthread_yield'
collect2: error: ld returned 1 exit status
/usr/lib/gcc/x86_64-gentoo-linux-musl/11.2.1/../../../../x86_64-gentoo-linux-musl/bin/ld: src/.libs/libfabric.so: undefined reference to `pthread_yield'
collect2: error: ld returned 1 exit status
make[1]: *** [Makefile:8709: util/fi_pingpong] Error 1

  -------------------------------------------------------------------

  This is an unstable amd64 chroot image at a tinderbox (==build bot)
  name: 17.0_musl_hardened-j4-20211210-222208

  -------------------------------------------------------------------

gcc-config -l:
 [1] x86_64-gentoo-linux-musl-11.2.1 *
clang version 13.0.0
Target: x86_64-gentoo-linux-musl
Thread model: posix
InstalledDir: /usr/lib/llvm/13/bin
/usr/lib/llvm/13
13.0.0
Python 3.9.9
Available Ruby profiles:
  (none found)
Available Rust versions:
  [1]   rust-bin-1.57.0 *
php cli:

  HEAD of ::gentoo
commit 270cb2e66d0db324872933c3cae8d7c0f38098f8
Author: Repository mirror & CI <repomirrorci@gentoo.org>
Date:   Sat Dec 11 20:51:44 2021 +0000

    2021-12-11 20:51:42 UTC

emerge -qpvO sys-block/libfabric
[ebuild  N    ] sys-block/libfabric-1.11.2  USE="(-cuda) -efa -rocr -usnic -verbs"

Comment 1 Toralf Förster gentoo-dev

2021-12-12 10:08:54 UTC

Created attachment 758624 [details]
emerge-info.txt

Comment 2 Toralf Förster gentoo-dev

2021-12-12 10:08:55 UTC

Created attachment 758625 [details]
emerge-history.txt

Comment 3 Toralf Förster gentoo-dev

2021-12-12 10:08:58 UTC

Created attachment 758626 [details]
environment

Comment 4 Toralf Förster gentoo-dev

2021-12-12 10:08:59 UTC

Created attachment 758627 [details]
etc.portage.tar.bz2

Comment 5 Toralf Förster gentoo-dev

2021-12-12 10:09:01 UTC

Created attachment 758628 [details]
logs.tar.bz2

Comment 6 Toralf Förster gentoo-dev

2021-12-12 10:09:03 UTC

Created attachment 758629 [details]
sys-block:libfabric-1.11.2:20211211-215840.log

Comment 7 Toralf Förster gentoo-dev

2021-12-12 10:09:04 UTC

Created attachment 758630 [details]
temp.tar.bz2

Comment 8 Agostino Sarubbo gentoo-dev

2022-01-10 19:06:34 UTC

tinderbox_musl has reproduced this issue with version 1.11.2-r1 - Updating summary.

Comment 9 Agostino Sarubbo gentoo-dev

2023-05-16 10:16:38 UTC

tinderbox_musl has reproduced this issue with version 1.11.2-r2 - Updating summary.

Comment 10 jy6x2b32pie9 2024-04-06 13:19:12 UTC

https://bugs.gentoo.org/895062 is a duplicate

Comment 11 Toralf Förster gentoo-dev

2024-04-06 13:49:10 UTC

*** Bug 895062 has been marked as a duplicate of this bug. ***

Comment 12 jy6x2b32pie9 2024-04-06 16:50:06 UTC

It needs version bump
Fixed upstream in https://github.com/ofiwg/libfabric/commit/d29f4384ca6e8aa93ce9a49f02868c66527da9bb