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Bug 822348 - sci-chemistry/gromacs-2022_beta1-r2 - CMake Error at cmake/gmxManageMuparser.cmake:77 (message):
Summary: sci-chemistry/gromacs-2022_beta1-r2 - CMake Error at cmake/gmxManageMuparser....
Status: RESOLVED FIXED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: Normal normal
Assignee: Alexey Shvetsov
URL:
Whiteboard:
Keywords:
: 822396 (view as bug list)
Depends on:
Blocks:
 
Reported: 2021-11-07 21:39 UTC by Toralf Förster
Modified: 2022-02-08 11:58 UTC (History)
5 users (show)

See Also:
Package list:
Runtime testing required: ---


Attachments
emerge-info.txt (emerge-info.txt,14.86 KB, text/plain)
2021-11-07 21:39 UTC, Toralf Förster
Details
CMakeError.log (CMakeError.log,13.43 KB, text/plain)
2021-11-07 21:39 UTC, Toralf Förster
Details
CMakeOutput.log (CMakeOutput.log,121.15 KB, text/plain)
2021-11-07 21:39 UTC, Toralf Förster
Details
emerge-history.txt (emerge-history.txt,151.46 KB, text/plain)
2021-11-07 21:39 UTC, Toralf Förster
Details
environment (environment,154.68 KB, text/plain)
2021-11-07 21:39 UTC, Toralf Förster
Details
etc.portage.tar.bz2 (etc.portage.tar.bz2,35.81 KB, application/x-bzip)
2021-11-07 21:39 UTC, Toralf Förster
Details
logs.tar.bz2 (logs.tar.bz2,9.81 KB, application/x-bzip)
2021-11-07 21:39 UTC, Toralf Förster
Details
sci-chemistry:gromacs-2022_beta1-r2:20211107-213738.log (sci-chemistry:gromacs-2022_beta1-r2:20211107-213738.log,14.52 KB, text/plain)
2021-11-07 21:39 UTC, Toralf Förster
Details
temp.tar.bz2 (temp.tar.bz2,36.98 KB, application/x-bzip)
2021-11-07 21:39 UTC, Toralf Förster
Details

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Description Toralf Förster gentoo-dev 2021-11-07 21:39:24 UTC
-- Found lmfit: /usr/include/include (found version "9.0.0") 
CMake Error at cmake/gmxManageMuparser.cmake:77 (message):
  External muparser >= 2.3 could not be found, please adjust your pkg-config
  path to include the muparser.pc file
Call Stack (most recent call first):
  src/gromacs/CMakeLists.txt:395 (gmx_manage_muparser)

  -------------------------------------------------------------------

  This is an unstable amd64 chroot image at a tinderbox (==build bot)
  name: 17.1_no_multilib-j4_debug-20211106-110004

  -------------------------------------------------------------------

gcc-config -l:
 [1] x86_64-pc-linux-gnu-11.2.0 *
/usr/lib/llvm/13
13.0.0
Python 3.9.8
Available Ruby profiles:
  [1]   ruby26 (with Rubygems)
  [2]   ruby27 (with Rubygems)
  [3]   ruby30 (with Rubygems) *
Available Rust versions:
  [1]   rust-1.56.1 *
php cli:

  HEAD of ::gentoo
commit 6d55f032dd26d5eb8cf60c7a20f6314247d4e97f
Author: Repository mirror & CI <repomirrorci@gentoo.org>
Date:   Sun Nov 7 21:21:30 2021 +0000

    2021-11-07 21:21:29 UTC

emerge -qpvO sci-chemistry/gromacs
[ebuild  N    ] sci-chemistry/gromacs-2022_beta1-r2  USE="custom-cflags doc fftw gmxapi gmxapi-legacy hwloc offensive openmp single-precision threads tng -blas -build-manual -cuda -double-precision -lapack -mkl -mpi -opencl (-python) -test" CPU_FLAGS_X86="avx avx2 sse2 sse4_1 -avx512f -fma4" PYTHON_SINGLE_TARGET="python3_9 -python3_8 -python3_10"
Comment 1 Toralf Förster gentoo-dev 2021-11-07 21:39:25 UTC
Created attachment 749442 [details]
emerge-info.txt
Comment 2 Toralf Förster gentoo-dev 2021-11-07 21:39:26 UTC
Created attachment 749445 [details]
CMakeError.log
Comment 3 Toralf Förster gentoo-dev 2021-11-07 21:39:28 UTC
Created attachment 749448 [details]
CMakeOutput.log
Comment 4 Toralf Förster gentoo-dev 2021-11-07 21:39:29 UTC
Created attachment 749451 [details]
emerge-history.txt
Comment 5 Toralf Förster gentoo-dev 2021-11-07 21:39:31 UTC
Created attachment 749454 [details]
environment
Comment 6 Toralf Förster gentoo-dev 2021-11-07 21:39:32 UTC
Created attachment 749457 [details]
etc.portage.tar.bz2
Comment 7 Toralf Förster gentoo-dev 2021-11-07 21:39:33 UTC
Created attachment 749460 [details]
logs.tar.bz2
Comment 8 Toralf Förster gentoo-dev 2021-11-07 21:39:34 UTC
Created attachment 749463 [details]
sci-chemistry:gromacs-2022_beta1-r2:20211107-213738.log
Comment 9 Toralf Förster gentoo-dev 2021-11-07 21:39:35 UTC
Created attachment 749466 [details]
temp.tar.bz2
Comment 10 Toralf Förster gentoo-dev 2021-11-18 19:03:21 UTC
*** Bug 822396 has been marked as a duplicate of this bug. ***
Comment 11 George Shapovalov 2021-11-22 11:20:46 UTC
Ditto here (same error or relevant setup I suppose),
muParser>=2.3 is installed:
[I] dev-cpp/muParser
     Available versions:  2.2.6.1^t (~)2.3.2-r1^t {doc openmp test}
     Installed versions:  2.3.2-r1^t(23:02:34 11/17/21)(openmp -doc -test)

So its gotta be something with the detection script. Likely following the commit by alexxy on 4 Nov:
sci-chemistry/gromacs: Unbundle muParser b7247fc
Alexey Shvetsov committed on 4 Nov 2021 18:02:12
Comment 12 Alexey Shvetsov archtester gentoo-dev 2022-02-08 11:58:45 UTC
Should be fixed with rc1