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Bug 80253 - sci-biology/hmmer-2.3.2 works on amd64
Summary: sci-biology/hmmer-2.3.2 works on amd64
Status: RESOLVED FIXED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: AMD64 Linux
: High enhancement (vote)
Assignee: AMD64 Project
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2005-01-31 13:40 UTC by Marco Matthies
Modified: 2005-02-07 16:15 UTC (History)
0 users

See Also:
Package list:
Runtime testing required: ---

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Description Marco Matthies 2005-01-31 13:40:16 UTC 
hmmer is program for creating hidden markov models for protein sequences.

i've used it a few times and it works flawlessly on amd64, i think it should get keyworded ~amd64.

output of emerge --info (if it's needed):

Portage 2.0.51-r15 (default-linux/amd64/2004.3, gcc-3.4.3, glibc-2.3.4.20040808-r1, 2.6.9-gentoo-r12 x86_64)
=================================================================
System uname: 2.6.9-gentoo-r12 x86_64 AMD Athlon(tm) 64 Processor 3000+
Gentoo Base System version 1.4.16
Python:              dev-lang/python-2.3.4 [2.3.4 (#1, Dec 12 2004, 17:07:13)]
dev-lang/python:     2.3.4
sys-devel/autoconf:  2.59-r6, 2.13
sys-devel/automake:  1.7.9-r1, 1.8.5-r3, 1.5, 1.4_p6, 1.6.3, 1.9.4
sys-devel/binutils:  2.15.92.0.2-r1
sys-devel/libtool:   1.5.10-r4
virtual/os-headers:  2.6.8.1-r2
ACCEPT_KEYWORDS="amd64"
AUTOCLEAN="yes"
CFLAGS="-march=athlon64 -O2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/X11R6/lib/X11/xkb /usr/kde/2/share/config /usr/kde/3/share/config /usr/lib/mozilla/defaults/pref /usr/share/config /usr/share/texmf/dvipdfm/config/ /usr/share/texmf/dvips/config/ /usr/share/texmf/tex/generic/config/ /usr/share/texmf/tex/platex/config/ /usr/share/texmf/xdvi/ /var/qmail/control"
CONFIG_PROTECT_MASK="/etc/gconf /etc/terminfo /etc/env.d"
CXXFLAGS="-march=athlon64 -O2 -pipe"
DISTDIR="/usr/portage/distfiles"
FEATURES="autoaddcvs autoconfig ccache distlocks sandbox"
GENTOO_MIRRORS="ftp://ftp-stud.fht-esslingen.de/pub/Mirrors/gentoo/ http://gentoo.zie.pg.gda.pl http://ftp-stud.fht-esslingen.de/pub/Mirrors/gentoo/ ftp://mirror.nutsmaas.nl/gentoo/"
LANG="en_US.ISO-8859-15"
MAKEOPTS="-j2"
PKGDIR="/usr/portage/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
PORTDIR_OVERLAY="/usr/local/portage"
SYNC="rsync://rsync.gentoo.org/gentoo-portage"
USE="amd64 X aalib acpi alsa berkdb bitmap-fonts cdr crypt dvd dvdr esd f77 fam flac font-server fortran gdbm gif gnome gpm gstreamer gtk gtk2 imlib ipv6 java joystick jp2 jpeg junit libwww lzw lzw-tiff mad matroska mozilla mpeg multilib ncurses nls nptl offensive oggvorbis opengl oss pam perl png python readline ruby sdl speex ssl tcpd tetex theora tiff truetype truetype-fonts type1-fonts usb userlocales xml xml2 xpm xrandr xv xvid zlib"
Unset:  ASFLAGS, CBUILD, CTARGET, LC_ALL, LDFLAGS


Reproducible: Always
Steps to Reproduce:
1.
2.
3.
Comment 1 Marco Matthies 2005-01-31 13:41:37 UTC 
i just wanted to add that the only thing needed for the ebuild to work was adding ~amd64 to the ebuild.
Comment 2 Kris Kersey (RETIRED) gentoo-dev 2005-02-07 16:15:51 UTC 
Done.  Marked amd64.