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Bug 731248 - sci-libs/umfpack-5.7.9 fails tests
Summary: sci-libs/umfpack-5.7.9 fails tests
Status: CONFIRMED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: Normal normal
Assignee: Gentoo Science Related Packages
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2020-07-07 10:04 UTC by Agostino Sarubbo
Modified: 2024-12-13 11:21 UTC (History)
2 users (show)

See Also:
Package list:
Runtime testing required: ---


Attachments
build.log (build.log,183.20 KB, text/plain)
2020-07-07 10:04 UTC, Agostino Sarubbo
Details
other.tar.bz2 (other.tar.bz2,4.92 KB, application/x-bzip-compressed-tar)
2020-07-07 10:04 UTC, Agostino Sarubbo
Details
Demo/test-suite.log with 3 asserts failed (file_731248.txt,80.22 KB, text/plain)
2024-12-13 11:21 UTC, Arniii
Details

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Description Agostino Sarubbo gentoo-dev 2020-07-07 10:04:37 UTC
https://blogs.gentoo.org/ago/2020/07/04/gentoo-tinderbox/

Issue: sci-libs/umfpack fails tests.
Discovered on: amd64
Comment 1 Agostino Sarubbo gentoo-dev 2020-07-07 10:04:44 UTC
Created attachment 648210 [details]
build.log

build log and emerge --info
Comment 2 Agostino Sarubbo gentoo-dev 2020-07-07 10:04:47 UTC
Created attachment 648212 [details]
other.tar.bz2

other logs
Comment 3 François Bissey 2020-07-07 10:26:01 UTC
That's a weird error. But there could be some library mismatch.
Comment 4 Agostino Sarubbo gentoo-dev 2022-11-20 08:45:38 UTC
ci has reproduced this issue with version 5.7.9 - Updating summary.
Comment 5 Arniii 2024-12-13 11:21:58 UTC
Created attachment 913908 [details]
Demo/test-suite.log with 3 asserts failed

I've got some more asserts failed.

Portage 3.0.66.1 (python 3.12.8-final-0, default/linux/amd64/23.0/split-usr/desktop/plasma, gcc-13, glibc-2.40-r5, 6.6.58-gentoo-dist x86_64)
=================================================================
System uname: Linux-6.6.58-gentoo-dist-x86_64-13th_Gen_Intel-R-_Core-TM-_i7-13700HX-with-glibc2.40
KiB Mem:    65573000 total,   7764852 free
KiB Swap:  271908856 total, 271908856 free
Timestamp of repository gentoo: Thu, 12 Dec 2024 18:30:00 +0000
Head commit of repository gentoo: 5293d4b91dabb4c61afc4990b4f177d273f0fc80
Timestamp of repository booboo: Wed, 11 Dec 2024 12:06:12 +0000
Head commit of repository booboo: 616cf62f30bbc0d395c832af5544e61f793f0153

Head commit of repository ex_repo: 6e25d1c661d0b34f71e455da2d55fa55043674ae

Timestamp of repository gentoo-zh: Thu, 12 Dec 2024 17:48:18 +0000
Head commit of repository gentoo-zh: a11aadbd4dc96cc89a196ae533d1cedec49cab2d

Timestamp of repository guru: Thu, 12 Dec 2024 17:18:19 +0000
Head commit of repository guru: 16de8ebf905214ca316f93da29930e109fc5c64b

Head commit of repository librewolf: ff7ec677faa8d4f3e15bff7c0cd483dc6dfb1d58

Head commit of repository mrpenguin: 1131e18dcf4481d1437f763f082a2f2256a6cdd2

Timestamp of repository mv: Wed, 11 Dec 2024 12:06:18 +0000
Head commit of repository mv: 987cdad606ac4df65a35596bb8255d5b2ef042aa

Timestamp of repository nest: Wed, 11 Dec 2024 12:06:32 +0000
Head commit of repository nest: 27e4c29a7a11e7bcd7a8f3a389f2aa4b1a4c9e02

Timestamp of repository pf4public: Wed, 11 Dec 2024 12:06:49 +0000
Head commit of repository pf4public: 2ab4dee0720a87127d395ffdcae4878410d0893a

Timestamp of repository steam-overlay: Wed, 11 Dec 2024 12:06:22 +0000
Head commit of repository steam-overlay: 94ba87e4a1cd7686d25b3520adee8a63e13785ee

Timestamp of repository supertux88: Wed, 11 Dec 2024 22:18:20 +0000
Head commit of repository supertux88: c37679a83bce1497c5ecf62b3622899b2c978083

Timestamp of repository torbrowser: Thu, 12 Dec 2024 10:33:30 +0000
Head commit of repository torbrowser: f2ee253b54271caf59d3f7abbad5a3468732a85a

Timestamp of repository vowstar: Thu, 12 Dec 2024 17:18:20 +0000
Head commit of repository vowstar: f72f3230603a51ff7f4805e5a6cb54c5859ab99b

sh bash 5.2_p37
ld GNU ld (Gentoo 2.42 p6) 2.42.0
ccache version 4.10.2 [disabled]
app-misc/pax-utils:        1.3.8::gentoo
app-shells/bash:           5.2_p37::gentoo
dev-build/autoconf:        2.13-r8::gentoo, 2.71-r7::gentoo, 2.72-r1::gentoo
dev-build/automake:        1.16.5-r2::gentoo
dev-build/cmake:           3.30.5::gentoo
dev-build/libtool:         2.4.7-r4::gentoo
dev-build/make:            4.4.1-r100::gentoo
dev-build/meson:           1.5.2::gentoo
dev-java/java-config:      2.3.4::gentoo
dev-lang/perl:             5.40.0::gentoo
dev-lang/python:           3.10.16_p1::gentoo, 3.11.11_p1::gentoo, 3.12.8::gentoo, 3.13.1::gentoo
dev-lang/rust-bin:         1.81.0-r101::gentoo, 1.82.0-r101::gentoo
dev-util/ccache:           4.10.2-r1::gentoo
llvm-core/clang:           17.0.6::gentoo, 18.1.8::gentoo, 20.0.0_pre20241106::gentoo
llvm-core/lld:             17.0.6::gentoo, 18.1.8::gentoo, 20.0.0_pre20241106::gentoo
llvm-core/llvm:            17.0.6::gentoo, 18.1.8-r1::gentoo, 20.0.0_pre20241106::gentoo
sys-apps/baselayout:       2.17::gentoo
sys-apps/openrc:           0.55.1::gentoo
sys-apps/sandbox:          2.39::gentoo
sys-devel/binutils:        2.42-r2::gentoo, 2.43-r2::gentoo
sys-devel/binutils-config: 5.5.2::gentoo
sys-devel/gcc:             12.4.0::gentoo, 13.3.1_p20241115::gentoo, 14.2.1_p20241116::gentoo, 15.0.0_pre20240804::gentoo
sys-devel/gcc-config:      2.11::gentoo
sys-kernel/linux-headers:  6.6-r1::gentoo (virtual/os-headers)
sys-libs/glibc:            2.40-r5::gentoo
Repositories:

gentoo
    location: /var/db/repos/gentoo
    sync-type: rsync
    sync-uri: rsync://rsync.gentoo.org/gentoo-portage
    priority: -1000
    volatile: False
    sync-rsync-verify-max-age: 3
    sync-rsync-verify-metamanifest: yes
    sync-rsync-extra-opts:
    sync-rsync-verify-jobs: 1

booboo
    location: /var/db/repos/booboo
    sync-type: git
    sync-uri: https://github.com/gentoo-mirror/booboo.git
    masters: gentoo
    volatile: False

crossdev_experiments
    location: /var/db/repos/crossdev_experiments
    masters: gentoo
    volatile: False

ex_repo
    location: /var/db/repos/ex_repo
    sync-type: git
    sync-uri: https://github.com/Gerodote/ex_repo.git
    masters: gentoo
    volatile: False

gentoo-zh
    location: /var/db/repos/gentoo-zh
    sync-type: git
    sync-uri: https://github.com/gentoo-mirror/gentoo-zh.git
    masters: gentoo
    volatile: False

guru
    location: /var/db/repos/guru
    sync-type: git
    sync-uri: https://github.com/gentoo-mirror/guru.git
    masters: gentoo
    volatile: False

librewolf
    location: /var/db/repos/librewolf
    sync-type: git
    sync-uri: https://codeberg.org/librewolf/gentoo.git
    masters: gentoo
    volatile: False

mrpenguin
    location: /var/db/repos/mrpenguin
    sync-type: git
    sync-uri: https://github.com/Gerodote/MrPenguin-s_ebuilds
    masters: gentoo
    volatile: False

mv
    location: /var/db/repos/mv
    sync-type: git
    sync-uri: https://github.com/gentoo-mirror/mv.git
    masters: gentoo
    volatile: False

nest
    location: /var/db/repos/nest
    sync-type: git
    sync-uri: https://github.com/gentoo-mirror/nest.git
    masters: gentoo
    volatile: False

pf4public
    location: /var/db/repos/pf4public
    sync-type: git
    sync-uri: https://github.com/gentoo-mirror/pf4public.git
    masters: gentoo
    volatile: False

steam-overlay
    location: /var/db/repos/steam-overlay
    sync-type: git
    sync-uri: https://github.com/gentoo-mirror/steam-overlay.git
    masters: gentoo
    volatile: False

supertux88
    location: /var/db/repos/supertux88
    sync-type: git
    sync-uri: https://github.com/gentoo-mirror/supertux88.git
    masters: gentoo
    volatile: False

torbrowser
    location: /var/db/repos/torbrowser
    sync-type: git
    sync-uri: https://github.com/gentoo-mirror/torbrowser.git
    masters: gentoo
    volatile: False

vowstar
    location: /var/db/repos/vowstar
    sync-type: git
    sync-uri: https://github.com/gentoo-mirror/vowstar.git
    masters: gentoo
    volatile: False

Binary Repositories:

gentoobinhost
    priority: 1
    sync-uri: https://gentoo.jss.hu/releases/amd64/binpackages/23.0/x86-64-v3

ACCEPT_KEYWORDS="amd64"
ACCEPT_LICENSE="@FREE @BINARY-REDISTRIBUTABLE"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-O3 -pipe -march=alderlake -mabm -mno-cldemote -mno-kl -mno-pconfig -mno-sgx -mno-widekl -mshstk --param=l1-cache-line-size=64 --param=l1-cache-size=48 --param=l2-cache-size=30720 -flto -Werror=odr -Werror=lto-type-mismatch -Werror=strict-aliasing -fgraphite-identity -floop-interchange -floop-strip-mine -floop-nest-optimize -ftree-loop-linear -ggdb3 -frecord-gcc-switches"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/lib64/libreoffice/program/sofficerc /usr/share/config /usr/share/easy-rsa /usr/share/gnupg/qualified.txt /usr/share/maven-bin-3.9/conf /var/bind"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php8.2/ext-active/ /etc/php/cgi-php8.2/ext-active/ /etc/php/cli-php8.2/ext-active/ /etc/php/fpm-php8.2/ext-active/ /etc/php/phpdbg-php8.2/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c"
CXXFLAGS="-O3 -pipe -march=alderlake -mabm -mno-cldemote -mno-kl -mno-pconfig -mno-sgx -mno-widekl -mshstk --param=l1-cache-line-size=64 --param=l1-cache-size=48 --param=l2-cache-size=30720 -flto -Werror=odr -Werror=lto-type-mismatch -Werror=strict-aliasing -fgraphite-identity -floop-interchange -floop-strip-mine -floop-nest-optimize -ftree-loop-linear -ggdb3 -frecord-gcc-switches"
DISTDIR="/var/cache/distfiles"
EMERGE_DEFAULT_OPTS="--jobs=4 --load-average=24 -b"
ENV_UNSET="CARGO_HOME DBUS_SESSION_BUS_ADDRESS DISPLAY GDK_PIXBUF_MODULE_FILE GOBIN GOPATH PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR XDG_STATE_HOME"
FCFLAGS="-O3 -pipe -march=alderlake -mabm -mno-cldemote -mno-kl -mno-pconfig -mno-sgx -mno-widekl -mshstk --param=l1-cache-line-size=64 --param=l1-cache-size=48 --param=l2-cache-size=30720 -flto -Werror=odr -Werror=lto-type-mismatch -Werror=strict-aliasing -fgraphite-identity -floop-interchange -floop-strip-mine -floop-nest-optimize -ftree-loop-linear -ggdb3 -frecord-gcc-switches"
FEATURES="assume-digests binpkg-docompress binpkg-dostrip binpkg-logs binpkg-multi-instance buildpkg buildpkg-live collision-protect config-protect-if-modified distlocks ebuild-locks fixlafiles installsources ipc-sandbox merge-sync merge-wait multilib-strict network-sandbox news noclean nostrip parallel-fetch pid-sandbox pkgdir-index-trusted preserve-libs protect-owned qa-unresolved-soname-deps sandbox sfperms split-elog split-log strict test unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-O3 -pipe -march=alderlake -mabm -mno-cldemote -mno-kl -mno-pconfig -mno-sgx -mno-widekl -mshstk --param=l1-cache-line-size=64 --param=l1-cache-size=48 --param=l2-cache-size=30720 -flto -Werror=odr -Werror=lto-type-mismatch -Werror=strict-aliasing -fgraphite-identity -floop-interchange -floop-strip-mine -floop-nest-optimize -ftree-loop-linear -ggdb3 -frecord-gcc-switches"
GENTOO_MIRRORS="https://gentoo.jss.hu https://ftp.agdsn.de/gentoo https://ftp.halifax.rwth-aachen.de/gentoo/ https://ftp.fau.de/gentoo https://ftp-stud.hs-esslingen.de/pub/Mirrors/gentoo/"
LANG="en_US.utf8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,--defsym=__gentoo_check_ldflags__=0"
LEX="flex"
MAKEOPTS="-j24"
PKGDIR="/var/cache/binpkgs"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git"
PORTAGE_TMPDIR="/var/tmp"
RUSTFLAGS="-C target-cpu=native -C opt-level=3 -C link-arg=-Wl,-z,pack-relative-relocs "
SHELL="/bin/bash"
USE="10bit 12bit 7z 7zip 8bit X a52 aac accel acl acpi activities adblock aesara aio alsa amd64 archive asm bluetooth bluetooth-sound bluez bluray branding brightness-control brotli btrfs bzip2 cairo cdda cdr cet colord crypt cuda cups dbus debuginfod declarative dist-kernel djvu doc dpms dri dts dvd dvdr elogind encode epub exif ext4 fat ffmpeg firmware fish-completion flac flatpak fontconfig ftp gdbm gif git gmp gnu gnuefi gnumeric gnupg gnuplot gpm graphite gstreamer gtk gui h264 hdri hwaccel hwasan iconv icu imaging initramfs ipv6 ipython jit jpeg jpeg2k jpegxl kde kdesu keyring kf6compat kwallet lapack lapacke latex lcms libarchive libcxx libdrm libmpv libnotify libreoffice libtirpc libv4l lrz lsp lspclient lto lua luajittex luatex lz4 lzip lzma lzo lzo2 mad man markdown mathml mng mobi mp3 mp4 mpeg mpris mpv mtp multilib mumble nbd ncurses networkmanager nfs nls ntfs numa numpy nvdec nvenc nvidia nvidia-gpu nvimpager nvme ogg ompt onednn opencl opengl openmp openssl openvpn pam pango parted pcre pdf pgo pipewire plasma png policykit postgres ppds pulseaudio pyglet python qml qsv qt5 qt6 rar raw readline regex sanitizer science screencast sdl seccomp semantic-desktop sftp sound sound-server spell split-usr ssl startup-notification svg symengine test test-rust tiff tmux truetype udev udisks unicode upower uri-support usb v4l v4l2 v4lutils vaapi vdpau vim vim-pager vim-syntax vorbis vulkan wav wayland webp websocket websockets widgets wifi wxwidgets x264 x265 xattr xcb xfs xft xinerama xls xlsx xml xterm xv xvid zip zlib zsh-completion zstd" ABI_X86="64" ADA_TARGET="gcc_12" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_anon authn_dbm authn_file authz_dbm authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir env expires ext_filter file_cache filter headers include info log_config logio mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="karbon sheets words" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="mmx mmxext sse sse2 aes avx avx2 f16c fma3 pclmul popcnt rdrand sha sse3 sse4_1 sse4_2 ssse3" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock greis isync itrax navcom oceanserver oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 tsip tripmate tnt ublox" GUILE_SINGLE_TARGET="3-0" GUILE_TARGETS="3-0" INPUT_DEVICES="libinput synaptics elographics" KERNEL="linux" L10N="ach af an ar ast az be bg bn br bs ca ca-valencia cak cs cy da de dsb el en-AU en-CA en-GB en-US eo es-419 es-AR es-CL es-ES es-MX et eu fa ff fi fil fr fur fy ga gd gl gn gu he hi hr hsb hu hy ia id is it ja ka kab kk km kn ko lij lt lv mk mr ms my nb ne nl nn oc pa pl pt-BR pt-PT rm ro ru sc sco si sk sl son sq sr sv szl ta te th tl tr trs uk ur uz vi xh zh-CN zh-TW am csb de-1901 en es fo grc gv hil hus ku ky la mg mi ml mn mt nds ny or qu rw sw tet tk tn wa yi zu as bn-IN bo brx ckb dgo dz en-ZA gug kmr-Latn kok ks lb lo mai mni nr nso om pt sa sat sd sid sr-Latn ss st sw-TZ tg ts tt ug ve vec zh skr fr-CA zh-HK" LCD_DEVICES="bayrad cfontz glk hd44780 lb216 lcdm001 mtxorb text" LLVM_TARGETS="AArch64 AMDGPU ARC ARM AVR BPF CSKY DirectX Hexagon Lanai LoongArch M68k MSP430 Mips NVPTX PowerPC RISCV SPIRV Sparc SystemZ VE WebAssembly X86 XCore Xtensa" LUA_SINGLE_TARGET="lua5-1" LUA_TARGETS="lua5-1" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php8-2" POSTGRES_TARGETS="postgres16" PYTHON_SINGLE_TARGET="python3_12" PYTHON_TARGETS="python3_12 python3_10 python3_11" RUBY_TARGETS="ruby32" VIDEO_CARDS="nvidia intel" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipp2p iface geoip fuzzy condition tarpit sysrq proto logmark ipmark dhcpmac delude chaos account"
Unset:  ADDR2LINE, AR, ARFLAGS, AS, ASFLAGS, CC, CCLD, CONFIG_SHELL, CPP, CPPFLAGS, CTARGET, CXX, CXXFILT, ELFEDIT, EXTRA_ECONF, F77FLAGS, FC, GCOV, GPROF, INSTALL_MASK, LC_ALL, LD, LFLAGS, LIBTOOL, LINGUAS, MAKE, MAKEFLAGS, NM, OBJCOPY, OBJDUMP, PORTAGE_BINHOST, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, PYTHONPATH, RANLIB, READELF, SIZE, STRINGS, STRIP, YACC, YFLAGS