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Bug 681220 - media-gfx/cura - segmentation fault in python3.6m at ? while handling error OSError: [Errno 9] Bad file descriptor
Summary: media-gfx/cura - segmentation fault in python3.6m at ? while handling error O...
Status: RESOLVED OBSOLETE
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: Normal normal (vote)
Assignee: 3D Printing Team
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2019-03-22 04:57 UTC by Nathan Dehnel
Modified: 2020-10-22 19:32 UTC (History)
6 users (show)

See Also:
Package list:
Runtime testing required: ---


Attachments
error mesages (cura,36.74 KB, text/plain)
2019-03-22 04:57 UTC, Nathan Dehnel
Details

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Description Nathan Dehnel 2019-03-22 04:57:01 UTC
Created attachment 570288 [details]
error mesages

nathan@gentoolaptop ~ $ QSocketNotifier: Invalid socket 8 and type 'Read', disabling...
Exception in thread Thread-8:
Traceback (most recent call last):
  File "/usr/lib64/python3.6/threading.py", line 916, in _bootstrap_inner
    self.run()
  File "/usr/lib64/python3.6/threading.py", line 864, in run
    self._target(*self._args, **self._kwargs)
  File "/usr/lib64/python3.6/site-packages/UM/Backend/Backend.py", line 152, in _storeOutputToLogThread
    line = handle.readline()
OSError: [Errno 9] Bad file descriptor

Unable to start Dr. Konqi
Re-raising signal for core dump handling.
emerge --info cura
Portage 2.3.51 (python 3.6.5-final-0, default/linux/amd64/17.0/desktop/plasma/systemd, gcc-8.2.0, glibc-2.27-r6, 4.19.23-gentoo x86_64)
=================================================================
                         System Settings
=================================================================
System uname: Linux-4.19.23-gentoo-x86_64-AMD_A6-3420M_APU_with_Radeon-tm-_HD_Graphics-with-gentoo-2.6
KiB Mem:    15866900 total,    457424 free
KiB Swap:     524284 total,    475632 free
Head commit of repository gentoo: 134e781bd3e14c73edf71424ae30c93a8471860f

sh bash 4.4_p23-r1
ld GNU ld (Gentoo 2.30 p5) 2.30.0
ccache version 3.3.4 [disabled]
app-shells/bash:          4.4_p23-r1::gentoo
dev-java/java-config:     2.2.0-r4::gentoo
dev-lang/perl:            5.26.2::gentoo
dev-lang/python:          2.7.15::gentoo, 3.5.5::gentoo, 3.6.5::gentoo
dev-util/ccache:          3.3.4-r1::gentoo
dev-util/cmake:           3.9.6::gentoo
dev-util/pkgconfig:       0.29.2::gentoo
sys-apps/baselayout:      2.6-r1::gentoo
sys-apps/sandbox:         2.13::gentoo
sys-devel/autoconf:       2.13-r1::gentoo, 2.69-r4::gentoo
sys-devel/automake:       1.15.1-r2::gentoo, 1.16.1-r1::gentoo
sys-devel/binutils:       2.30-r4::gentoo
sys-devel/gcc:            8.2.0-r6::gentoo
sys-devel/gcc-config:     2.0::gentoo
sys-devel/libtool:        2.4.6-r3::gentoo
sys-devel/make:           4.2.1-r4::gentoo
sys-kernel/linux-headers: 4.14-r1::gentoo (virtual/os-headers)
sys-libs/glibc:           2.27-r6::gentoo
Repositories:

gentoo
    location: /usr/portage
    sync-type: git
    sync-uri: git://anongit.gentoo.org/repo/gentoo.git
    priority: -1000

crossdev
    location: /media/store/Libraries/Tools/overlays/crossdev
    masters: gentoo
    priority: 10

geaaru
    location: /var/lib/layman/geaaru
    sync-type: laymansync
    sync-uri: https://github.com/geaaru/geaaru_overlay.git
    masters: gentoo
    priority: 40

deadbeef-overlay
    location: /var/lib/layman/deadbeef-overlay
    sync-type: laymansync
    sync-uri: https://github.com/damex/deadbeef-overlay.git
    masters: gentoo
    priority: 50

fusion809
    location: /var/lib/layman/fusion809
    sync-type: laymansync
    sync-uri: https://github.com/fusion809/fusion809-overlay.git
    masters: gentoo
    priority: 50

go-overlay
    location: /var/lib/layman/go-overlay
    sync-type: laymansync
    sync-uri: https://github.com/Dr-Terrible/go-overlay.git
    masters: gentoo
    priority: 50

java
    location: /var/lib/layman/java
    sync-type: laymansync
    sync-uri: git://anongit.gentoo.org/proj/java.git
    masters: gentoo
    priority: 50

sabayon
    location: /var/lib/layman/sabayon
    sync-type: laymansync
    sync-uri: git://github.com/Sabayon/for-gentoo.git
    masters: gentoo
    priority: 50

steam-overlay
    location: /var/lib/layman/steam-overlay
    sync-type: laymansync
    sync-uri: git://github.com/anyc/steam-overlay.git
    masters: gentoo
    priority: 50

tlp
    location: /var/lib/layman/tlp
    sync-type: laymansync
    sync-uri: git://github.com/dywisor/tlp-portage.git
    masters: gentoo
    priority: 50

torbrowser
    location: /var/lib/layman/torbrowser
    sync-type: laymansync
    sync-uri: https://github.com/MeisterP/torbrowser-overlay.git
    masters: gentoo
    priority: 50

localrepo
    location: /media/store/Libraries/Tools/overlays/localrepo
    masters: gentoo localrepo geaaru go-overlay
    priority: 100

ACCEPT_KEYWORDS="amd64"
ACCEPT_LICENSE="* -@EULA"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-Os -march=x86-64 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/lib64/libreoffice/program/sofficerc /usr/share/config /usr/share/gnupg/qualified.txt"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c"
CXXFLAGS="-Os -march=x86-64 -pipe"
DISTDIR="/usr/portage/distfiles"
EMERGE_DEFAULT_OPTS="--jobs 2 --load-average 3.6"
ENV_UNSET="DBUS_SESSION_BUS_ADDRESS DISPLAY GOBIN PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync multilib-strict news parallel-fetch preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-O2 -pipe"
GENTOO_MIRRORS="http://distfiles.gentoo.org"
LANG="en_US.utf8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j2"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git"
PORTAGE_TMPDIR="/var/tmp"
USE="X a52 aac acl acpi activities alsa amd64 berkdb bluetooth branding bzip2 cairo caps cdda cdr cli crypt cups cxx dbus declarative dri dts dvd dvdr emboss encode exif fam flac fortran gdbm gif glamor gpm gtk iconv infinality ipv6 jack java jpeg kde kipi kwallet lcms ldap libnotify libtirpc mad mng mp3 mp4 mpeg multilib ncurses nfs nls nptl ogg opengl openmp pam pango pcre pdf phonon plasma png policykit ppds qml qt5 readline realtime sdl seccomp semantic-desktop spell ssl startup-notification svg systemd tcpd tiff truetype udev udisks unicode upower usb vorbis widgets wxwidgets x264 xattr xcb xcomposite xml xv xvid zlib" ABI_X86="64" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="karbon sheets words" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="3dnow 3dnowext mmx mmxext popcnt sse sse2 sse3 sse4a" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock isync itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="libinput" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" NETBEANS_MODULES="apisupport cnd groovy gsf harness ide identity j2ee java mobility nb php profiler soa visualweb webcommon websvccommon xml" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-6 php7-1" POSTGRES_TARGETS="postgres9_5 postgres10" PYTHON_SINGLE_TARGET="python3_6" PYTHON_TARGETS="python2_7 python3_6" QEMU_SOFTMMU_TARGETS="x86_64 s390x i386 arm64 ppc64" RUBY_TARGETS="ruby24" USERLAND="GNU" VIDEO_CARDS="radeon r600" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CC, CPPFLAGS, CTARGET, CXX, INSTALL_MASK, LC_ALL, LINGUAS, PORTAGE_BINHOST, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS

=================================================================
                        Package Settings
=================================================================

media-gfx/cura-3.6.0::gentoo was built with the following:
USE="usb -zeroconf" ABI_X86="(64)" PYTHON_SINGLE_TARGET="python3_6 -python3_5" PYTHON_TARGETS="python3_6 -python3_5"

[1]-  Segmentation fault      (core dumped) cura
Comment 1 Sebastian Schreier 2019-04-28 00:11:03 UTC
I had a similar problem and it looks like it's related to PyQt5, try downgrading to version 5.9.2 it fixed it for me ;-)
Comment 2 Sebastian Schreier 2019-04-28 00:17:51 UTC
Forgot to add the link with a patch from arch

https://bugs.launchpad.net/ubuntu/+source/pyqt5/+bug/1766092