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Bug 678380 - sci-chemistry/gromacs-2019.1 : * !!! newdoc: /var/tmp/portage/sci-chemistry/gromacs-2019.1/work/gromacs-2019.1_float/docs/manual/gromacs.pdf does not exist
Summary: sci-chemistry/gromacs-2019.1 : * !!! newdoc: /var/tmp/portage/sci-chemistry/...
Status: RESOLVED WORKSFORME
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: Normal normal (vote)
Assignee: Alexey Shvetsov
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2019-02-19 18:35 UTC by Toralf Förster
Modified: 2019-06-03 07:07 UTC (History)
1 user (show)

See Also:
Package list:
Runtime testing required: ---


Attachments
emerge-info.txt (emerge-info.txt,15.92 KB, text/plain)
2019-02-19 18:35 UTC, Toralf Förster
Details
emerge-history.txt (emerge-history.txt,153.39 KB, text/plain)
2019-02-19 18:35 UTC, Toralf Förster
Details
environment (environment,164.81 KB, text/plain)
2019-02-19 18:35 UTC, Toralf Förster
Details
etc.portage.tbz2 (etc.portage.tbz2,12.61 KB, application/x-bzip)
2019-02-19 18:35 UTC, Toralf Förster
Details
logs.tbz2 (logs.tbz2,11.94 KB, application/x-bzip)
2019-02-19 18:35 UTC, Toralf Förster
Details
sci-chemistry:gromacs-2019.1:20190219-081318.log.bz2 (sci-chemistry:gromacs-2019.1:20190219-081318.log.bz2,29.92 KB, application/x-bzip)
2019-02-19 18:35 UTC, Toralf Förster
Details
temp.tbz2 (temp.tbz2,66.10 KB, application/x-bzip)
2019-02-19 18:35 UTC, Toralf Förster
Details

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Description Toralf Förster gentoo-dev 2019-02-19 18:35:37 UTC
-- Installing: /var/tmp/portage/sci-chemistry/gromacs-2019.1/image/usr/share/cmake/gmxapi/gmxapi-config.cmake
 * ERROR: sci-chemistry/gromacs-2019.1::gentoo failed (install phase):
 *   !!! newdoc: /var/tmp/portage/sci-chemistry/gromacs-2019.1/work/gromacs-2019.1_float/docs/manual/gromacs.pdf does not exist
 * 
 * If you need support, post the output of `emerge --info '=sci-chemistry/gromacs-2019.1::gentoo'`,
 * the complete build log and the output of `emerge -pqv '=sci-chemistry/gromacs-2019.1::gentoo'`.

  -------------------------------------------------------------------

  This is an unstable amd64 chroot image at a tinderbox (==build bot)
  name: 17.1-hardened_20190216-092018

  -------------------------------------------------------------------

gcc-config -l:
 [1] x86_64-pc-linux-gnu-7.3.1
 [2] x86_64-pc-linux-gnu-8.2.0 *

Available Python interpreters, in order of preference:
  [1]   python3.7
  [2]   python3.6
  [3]   python2.7 (fallback)
  [4]   pypy3 (fallback)
  [5]   pypy (fallback)
Available Ruby profiles:
  [1]   ruby24 (with Rubygems)
  [2]   ruby25 (with Rubygems)
  [3]   ruby26 (with Rubygems) *
Available Rust versions:
  [1]   rust-1.32.0 *



emerge -qpvO sci-chemistry/gromacs
[ebuild  N    ] sci-chemistry/gromacs-2019.1  USE="doc fftw gmxapi hwloc lmfit offensive openmp single-precision threads tng -X -blas -cuda -double-precision -lapack -mkl -mpi -opencl -test" CPU_FLAGS_X86="avx avx2 sse2 sse4_1 -fma4" PYTHON_TARGETS="python2_7"
Comment 1 Toralf Förster gentoo-dev 2019-02-19 18:35:40 UTC
Created attachment 565878 [details]
emerge-info.txt
Comment 2 Toralf Förster gentoo-dev 2019-02-19 18:35:42 UTC
Created attachment 565880 [details]
emerge-history.txt
Comment 3 Toralf Förster gentoo-dev 2019-02-19 18:35:45 UTC
Created attachment 565882 [details]
environment
Comment 4 Toralf Förster gentoo-dev 2019-02-19 18:35:48 UTC
Created attachment 565884 [details]
etc.portage.tbz2
Comment 5 Toralf Förster gentoo-dev 2019-02-19 18:35:51 UTC
Created attachment 565886 [details]
logs.tbz2
Comment 6 Toralf Förster gentoo-dev 2019-02-19 18:35:53 UTC
Created attachment 565888 [details]
sci-chemistry:gromacs-2019.1:20190219-081318.log.bz2
Comment 7 Toralf Förster gentoo-dev 2019-02-19 18:35:56 UTC
Created attachment 565890 [details]
temp.tbz2
Comment 8 Alexey Shvetsov archtester gentoo-dev 2019-06-03 07:07:06 UTC
Should be fixed