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Bug 646070 - dev-libs/boost-1.63.0 src_compile(): ld: cannot find -lpython2.7
Summary: dev-libs/boost-1.63.0 src_compile(): ld: cannot find -lpython2.7
Status: RESOLVED OBSOLETE
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: Normal normal (vote)
Assignee: David Seifert
URL:
Whiteboard:
Keywords:
Depends on:
Blocks: 664058
  Show dependency tree
 
Reported: 2018-01-29 19:58 UTC by Nick Bowler
Modified: 2019-04-19 09:40 UTC (History)
3 users (show)

See Also:
Package list:
Runtime testing required: ---


Attachments
dev-libs:boost-1.63.0:20180129-194107.log (dev-libs:boost-1.63.0:20180129-194107.log,394.24 KB, text/plain)
2018-01-29 19:58 UTC, Nick Bowler
Details
boost-build-1.65.0-linux-x32.patch (boost-build-1.65-0-linux-x32.patch,1.62 KB, patch)
2018-08-07 21:37 UTC, camper
Details | Diff
boost-1.65.0-fix-x32-build.patch (boost-1.65.0-fix-x32-build.patch,1.81 KB, patch)
2018-08-07 21:38 UTC, camper
Details | Diff
boost-build-1.67.0-linux-x32.patch (boost-build-1.67.0-linux-x32.patch,1.72 KB, patch)
2018-08-07 21:39 UTC, camper
Details | Diff
boost-1.67.0-fix-x32-build.patch (boost-1.67.0-fix-x32-build.patch,2.68 KB, patch)
2018-08-07 21:40 UTC, camper
Details | Diff

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Description Nick Bowler 2018-01-29 19:58:28 UTC
Created attachment 517082 [details]
dev-libs:boost-1.63.0:20180129-194107.log

Attempting to install current stable boost-1.63.0 fails...

  gcc.link.dll bin.v2/libs/python/build/gcc-6.4/gentoorelease/boost.locale.icu-off/pch-off/threading-multi/libboost_python-2.7.so.1.63.0

      "x86_64-pc-linux-gnux32-g++" -L"/var/tmp/portage/dev-libs/boost-1.63.0/temp"   -o "bin.v2/libs/python/build/gcc-6.4/gentoorelease/boost.locale.icu-off/pch-off/threading-multi/libboost_python-2.7.so.1.63.0" -Wl,-h -Wl,libboost_python-2.7.so.1.63.0 -shared -Wl,--start-group "bin.v2/libs/python/build/gcc-6.4/gentoorelease/boost.locale.icu-off/pch-off/threading-multi/numeric.o" "bin.v2/libs/python/build/gcc-6.4/gentoorelease/boost.locale.icu-off/pch-off/threading-multi/list.o" "bin.v2/libs/python/build/gcc-6.4/gentoorelease/boost.locale.icu-off/pch-off/threading-multi/long.o" "bin.v2/libs/python/build/gcc-6.4/gentoorelease/boost.locale.icu-off/pch-off/threading-multi/dict.o" "bin.v2/libs/python/build/gcc-6.4/gentoorelease/boost.locale.icu-off/pch-off/threading-multi/tuple.o" "bin.v2/libs/python/build/gcc-6.4/gentoorelease/boost.locale.icu-off/pch-off/threading-multi/str.o" "bin.v2/libs/python/build/gcc-6.4/gentoorelease/boost.locale.icu-off/pch-off/threading-multi/slice.o" "bin.v2/libs/python/build/gcc-6.4/gentoorelease/boost.locale.icu-off/pch-off/threading-multi/converter/from_python.o" "bin.v2/libs/python/build/gcc-6.4/gentoorelease/boost.locale.icu-off/pch-off/threading-multi/converter/registry.o" "bin.v2/libs/python/build/gcc-6.4/gentoorelease/boost.locale.icu-off/pch-off/threading-multi/converter/type_id.o" "bin.v2/libs/python/build/gcc-6.4/gentoorelease/boost.locale.icu-off/pch-off/threading-multi/object/enum.o" "bin.v2/libs/python/build/gcc-6.4/gentoorelease/boost.locale.icu-off/pch-off/threading-multi/object/class.o" "bin.v2/libs/python/build/gcc-6.4/gentoorelease/boost.locale.icu-off/pch-off/threading-multi/object/function.o" "bin.v2/libs/python/build/gcc-6.4/gentoorelease/boost.locale.icu-off/pch-off/threading-multi/object/inheritance.o" "bin.v2/libs/python/build/gcc-6.4/gentoorelease/boost.locale.icu-off/pch-off/threading-multi/object/life_support.o" "bin.v2/libs/python/build/gcc-6.4/gentoorelease/boost.locale.icu-off/pch-off/threading-multi/object/pickle_support.o" "bin.v2/libs/python/build/gcc-6.4/gentoorelease/boost.locale.icu-off/pch-off/threading-multi/errors.o" "bin.v2/libs/python/build/gcc-6.4/gentoorelease/boost.locale.icu-off/pch-off/threading-multi/module.o" "bin.v2/libs/python/build/gcc-6.4/gentoorelease/boost.locale.icu-off/pch-off/threading-multi/converter/builtin_converters.o" "bin.v2/libs/python/build/gcc-6.4/gentoorelease/boost.locale.icu-off/pch-off/threading-multi/converter/arg_to_python_base.o" "bin.v2/libs/python/build/gcc-6.4/gentoorelease/boost.locale.icu-off/pch-off/threading-multi/object/iterator.o" "bin.v2/libs/python/build/gcc-6.4/gentoorelease/boost.locale.icu-off/pch-off/threading-multi/object/stl_iterator.o" "bin.v2/libs/python/build/gcc-6.4/gentoorelease/boost.locale.icu-off/pch-off/threading-multi/object_protocol.o" "bin.v2/libs/python/build/gcc-6.4/gentoorelease/boost.locale.icu-off/pch-off/threading-multi/object_operators.o" "bin.v2/libs/python/build/gcc-6.4/gentoorelease/boost.locale.icu-off/pch-off/threading-multi/wrapper.o" "bin.v2/libs/python/build/gcc-6.4/gentoorelease/boost.locale.icu-off/pch-off/threading-multi/import.o" "bin.v2/libs/python/build/gcc-6.4/gentoorelease/boost.locale.icu-off/pch-off/threading-multi/exec.o" "bin.v2/libs/python/build/gcc-6.4/gentoorelease/boost.locale.icu-off/pch-off/threading-multi/object/function_doc_signature.o"  -Wl,-Bstatic  -Wl,-Bdynamic -ldl -lpthread -lpython2.7 -lutil -lrt -Wl,--end-group -Wl,-O1 -Wl,--as-needed -march=i686 -pthread -m32

  /usr/lib/gcc/x86_64-pc-linux-gnux32/6.4.0/../../../../x86_64-pc-linux-gnux32/bin/ld: skipping incompatible /var/tmp/portage/dev-libs/boost-1.63.0/temp/libpython2.7.so when searching for -lpython2.7
  /usr/lib/gcc/x86_64-pc-linux-gnux32/6.4.0/../../../../x86_64-pc-linux-gnux32/bin/ld: cannot find -lpython2.7
  collect2: error: ld returned 1 exit status

... it seems that the linker is being called with the wrong ABI.

Portage 2.3.19 (python 3.5.4-final-0, default/linux/amd64/17.0/x32, gcc-6.4.0, glibc-2.25-r9, 4.14.10 x86_64)
=================================================================
                         System Settings
=================================================================
System uname: Linux-4.14.10-x86_64-Intel-R-_Atom-TM-_CPU_D525_@_1.80GHz-with-gentoo-2.4.1
KiB Mem:     4035048 total,     49996 free
KiB Swap:          0 total,         0 free
Timestamp of repository gentoo: Mon, 29 Jan 2018 00:45:01 +0000
sh dash 0.5.9.1-r3
ld GNU ld (Gentoo 2.29.1 p3) 2.29.1
ccache version 3.2.4 [enabled]
app-shells/bash:          4.4_p12::gentoo
dev-lang/perl:            5.24.3::gentoo
dev-lang/python:          2.7.14-r1::gentoo, 3.5.4-r1::gentoo
dev-util/ccache:          3.2.4::gentoo
sys-apps/baselayout:      2.4.1-r2::gentoo
sys-apps/openrc:          0.34.11::gentoo
sys-apps/sandbox:         2.12::gentoo
sys-devel/autoconf:       2.69-r4::gentoo
sys-devel/automake:       1.15.1-r1::gentoo
sys-devel/binutils:       2.29.1-r1::gentoo
sys-devel/gcc:            6.4.0-r1::gentoo
sys-devel/gcc-config:     1.8-r1::gentoo
sys-devel/libtool:        2.4.6-r3::gentoo
sys-devel/make:           4.2.1::gentoo
sys-kernel/linux-headers: 4.13::gentoo (virtual/os-headers)
sys-libs/glibc:           2.25-r9::gentoo
Repositories:

gentoo
    location: /srv/repos/gentoo
    sync-type: webrsync
    sync-uri: rsync://rsync.gentoo.org/gentoo-portage
    sync-user: portage
    priority: -1000

ACCEPT_KEYWORDS="amd64"
ACCEPT_LICENSE="@FREE"
CBUILD="x86_64-pc-linux-gnux32"
CFLAGS="-O2 -pipe -march=atom"
CHOST="x86_64-pc-linux-gnux32"
CONFIG_PROTECT="/etc /usr/share/gnupg/qualified.txt"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo"
CXXFLAGS="-O2 -pipe -march=atom"
DISTDIR="/srv/repos/gentoo/distfiles"
EMERGE_DEFAULT_OPTS="-j2 --keep-going --dynamic-deps=n --autounmask-write=n --unordered-display --verbose-conflicts --binpkg-respect-use=y --with-bdeps-auto=n"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-logs binpkg-multi-instance ccache config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync multilib-strict news parallel-fetch preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync webrsync-gpg xattr"
FFLAGS="-O2 -pipe"
GENTOO_MIRRORS="http://distfiles.gentoo.org"
INSTALL_MASK="/etc/portage/*postsync.d"
LANG="en_CA.UTF-8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j4"
PKGDIR="/var/cache/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git"
PORTAGE_TMPDIR="/var/tmp"
USE="acl amd64 berkdb bzip2 cli crypt cxx dri fortran gdbm iconv idn ipv6 kerberos modules multilib ncurses nls nptl openmp pam pcre python readline seccomp ssl tcpd unicode xattr zlib" ABI_X86="x32" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="mmx mmxext sse sse2 sse3 ssse3" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock isync itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="libinput keyboard mouse" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-6 php7-0" POSTGRES_TARGETS="postgres9_5" PYTHON_SINGLE_TARGET="python3_5" PYTHON_TARGETS="python2_7 python3_5" RUBY_TARGETS="ruby22 ruby23" USERLAND="GNU" VIDEO_CARDS="amdgpu fbdev intel nouveau radeon radeonsi vesa dummy v4l" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CC, CPPFLAGS, CTARGET, CXX, LC_ALL, LINGUAS, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS
Comment 1 camper 2018-08-07 21:37:56 UTC
Created attachment 542734 [details, diff]
boost-build-1.65.0-linux-x32.patch
Comment 2 camper 2018-08-07 21:38:56 UTC
Created attachment 542736 [details, diff]
boost-1.65.0-fix-x32-build.patch
Comment 3 camper 2018-08-07 21:39:45 UTC
Created attachment 542738 [details, diff]
boost-build-1.67.0-linux-x32.patch
Comment 4 camper 2018-08-07 21:40:25 UTC
Created attachment 542740 [details, diff]
boost-1.67.0-fix-x32-build.patch
Comment 5 camper 2018-08-11 17:59:22 UTC
Boost's build system uses the same internal value of x86 for the both true 32-bit x86-system as well as amd64. Besides that only the size of pointers is detected, thus x86 and x32 cannot be distinguished. Also during compilation an -mabi flag is always being emitted. As a result the libraries are being built with the wrong ABI (using -m32 instead of -mx32).

The summary should probably be changed in order to reflect that this bug depends on ABI_X86=x32 and should block #393673.
Comment 6 David Seifert gentoo-dev 2019-04-19 09:40:12 UTC
Please retest with masked 1.70.0, and file a new bug if the problem persists.