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Bug 644524 - patch: /lib64/libattr.so.1: version `ATTR_1.3' not found (required by patch)
Summary: patch: /lib64/libattr.so.1: version `ATTR_1.3' not found (required by patch)
Status: RESOLVED CANTFIX
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: Normal normal
Assignee: Gentoo Linux bug wranglers
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2018-01-14 10:50 UTC by Daniel Koszta
Modified: 2018-01-16 18:12 UTC (History)
2 users (show)

See Also:
Package list:
Runtime testing required: ---


Attachments
10_all_default-fortify-source.patch.out (10_all_default-fortify-source.patch.out,1.98 KB, text/plain)
2018-01-14 10:51 UTC, Daniel Koszta
Details

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Description Daniel Koszta 2018-01-14 10:50:20 UTC
When trying to update to gcc-6.4.0-r1 from gcc-6.4.0, I encountered the following error:

 * Failed Patch: 10_all_default-fortify-source.patch !
 *  ( /var/tmp/portage/sys-devel/gcc-6.4.0-r1/work/patch/10_all_default-fortify-source.patch )
 * 
 * Include in your bugreport the contents of:
 * 
 *   /var/tmp/portage/sys-devel/gcc-6.4.0-r1/temp/10_all_default-fortify-source.patch.out
 * ERROR: sys-devel/gcc-6.4.0-r1::gentoo failed (prepare phase):
 *   Failed Patch: 10_all_default-fortify-source.patch!

I attached 10_all_default-fortify-source.patch.out, as suggested by the error message.
Comment 1 Daniel Koszta 2018-01-14 10:51:31 UTC
Created attachment 514752 [details]
10_all_default-fortify-source.patch.out
Comment 2 Daniel Koszta 2018-01-14 10:52:25 UTC
Output of emerge --info:

Portage 2.3.19 (python 3.5.4-final-0, default/linux/amd64/17.0/desktop, gcc-7.2.0, glibc-2.26-r5, 4.14.12-gentoo x86_64)
=================================================================
System uname: Linux-4.14.12-gentoo-x86_64-Intel-R-_Xeon-R-_CPU_E5-2643_0_@_3.30GHz-with-gentoo-2.4.1
KiB Mem:    32820124 total,    239708 free
KiB Swap:          0 total,         0 free
Timestamp of repository gentoo: Sun, 14 Jan 2018 10:00:01 +0000
Head commit of repository gentoo: f8dc70c5d7f481044b63661394d5480f0436628c
sh bash 4.4_p12
ld GNU ld (Gentoo 2.29.1 p3) 2.29.1
app-shells/bash:          4.4_p12::gentoo
dev-java/java-config:     2.2.0-r3::gentoo
dev-lang/perl:            5.26.1-r1::gentoo
dev-lang/python:          2.7.14-r1::gentoo, 3.4.6-r1::gentoo, 3.5.4-r1::gentoo, 3.6.4::gentoo
dev-util/cmake:           3.10.1::gentoo
dev-util/pkgconfig:       0.29.2::gentoo
sys-apps/baselayout:      2.4.1-r2::gentoo
sys-apps/openrc:          0.34.11::gentoo
sys-apps/sandbox:         2.12::gentoo
sys-devel/autoconf:       2.13::gentoo, 2.69-r4::gentoo
sys-devel/automake:       1.15.1-r1::gentoo
sys-devel/binutils:       2.29.1-r1::gentoo
sys-devel/gcc:            6.4.0::gentoo, 7.2.0::gentoo
sys-devel/gcc-config:     1.9.1::gentoo
sys-devel/libtool:        2.4.6-r4::gentoo
sys-devel/make:           4.2.1-r1::gentoo
sys-kernel/linux-headers: 4.14::gentoo (virtual/os-headers)
sys-libs/glibc:           2.26-r5::gentoo
Repositories:

gentoo
    location: /usr/portage
    sync-type: rsync
    sync-uri: rsync://rsync.gentoo.org/gentoo-portage
    priority: -1000
    sync-rsync-extra-opts: 

localrepo
    location: /usr/local/portage
    masters: gentoo

ACCEPT_KEYWORDS="amd64 ~amd64"
ACCEPT_LICENSE="* -@EULA"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-O2 -pipe -march=native -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/lib64/libreoffice/program/sofficerc /usr/share/config /usr/share/gnupg/qualified.txt"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php5.6/ext-active/ /etc/php/apache2-php7.0/ext-active/ /etc/php/apache2-php7.1/ext-active/ /etc/php/apache2-php7.2/ext-active/ /etc/php/cgi-php5.6/ext-active/ /etc/php/cgi-php7.0/ext-active/ /etc/php/cgi-php7.1/ext-active/ /etc/php/cgi-php7.2/ext-active/ /etc/php/cli-php5.6/ext-active/ /etc/php/cli-php7.0/ext-active/ /etc/php/cli-php7.1/ext-active/ /etc/php/cli-php7.2/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c"
CXXFLAGS="-O2 -pipe -march=native -pipe"
DISTDIR="/usr/portage/distfiles"
EMERGE_DEFAULT_OPTS="--autounmask-backtrack=y --backtrack=1000"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync multilib-strict news parallel-fetch preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-O2 -pipe"
GENTOO_MIRRORS="http://mirror.eu.oneandone.net/linux/distributions/gentoo/gentoo/ rsync://mirror.eu.oneandone.net/gentoo/ ftp://ftp.wh2.tu-dresden.de/pub/mirrors/gentoo ftp://mirror.netcologne.de/gentoo/ rsync://mirror.netcologne.de/gentoo/ http://mirror.netcologne.de/gentoo/ http://linux.rz.ruhr-uni-bochum.de/download/gentoo-mirror/ http://ftp.halifax.rwth-aachen.de/gentoo/ ftp://ftp.halifax.rwth-aachen.de/gentoo/ rsync://ftp.halifax.rwth-aachen.de/gentoo/ ftp://sunsite.informatik.rwth-aachen.de/pub/Linux/gentoo ftp://ftp.uni-erlangen.de/pub/mirrors/gentoo http://ftp.uni-erlangen.de/pub/mirrors/gentoo ftp://ftp-stud.hs-esslingen.de/pub/Mirrors/gentoo/ http://ftp-stud.hs-esslingen.de/pub/Mirrors/gentoo/ rsync://ftp-stud.hs-esslingen.de/gentoo/"
LANG="en_IN.utf8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j8"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git"
PORTAGE_TMPDIR="/var/tmp"
USE="X a52 aac acl acpi alsa amd64 berkdb bindist bluetooth branding bzip2 cairo cdda cdr cli crypt cups cxx dbus dri dts dvd dvdr elogind emboss encode exif fam firefox flac fortran gdbm gif glamor gpm gtk iconv ipv6 jpeg lcms ldap libnotify mad mng modules mp3 mp4 mpeg multilib ncurses nls nptl ogg opengl openmp pam pango pcre pdf png policykit ppds pulseaudio qt3support qt5 readline sdl seccomp spell ssl startup-notification svg tcpd tiff truetype udev udisks unicode upower usb vorbis wxwidgets x264 xattr xcb xml xv xvid zlib" ABI_X86="64" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="mmx sse sse2" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock isync itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 timing tsip tripmate tnt ublox ubx" GRUB_PLATFORMS="efi-64" INPUT_DEVICES="libinput keyboard mouse" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-6 php7-0 php5-6 php7-0" POSTGRES_TARGETS="postgres9_5" PYTHON_SINGLE_TARGET="python3_5" PYTHON_TARGETS="python2_7 python3_5" RUBY_TARGETS="ruby22" USERLAND="GNU" VIDEO_CARDS="nouveau" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CC, CPPFLAGS, CTARGET, CXX, INSTALL_MASK, LC_ALL, LINGUAS, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS
Comment 3 Ben Kohler gentoo-dev 2018-01-14 16:29:01 UTC
patch: /lib64/libattr.so.1: version `ATTR_1.3' not found (required by patch)


Your patch binary is broken, probably due to the recent upgrade-then-downgrade of sys-apps/attr, can you try "emerge -1 sys-devel/patch"?
Comment 4 Daniel Koszta 2018-01-16 18:12:59 UTC
(In reply to Ben Kohler from comment #3)
> patch: /lib64/libattr.so.1: version `ATTR_1.3' not found (required by patch)
> 
> 
> Your patch binary is broken, probably due to the recent
> upgrade-then-downgrade of sys-apps/attr, can you try "emerge -1
> sys-devel/patch"?

Thanks, "emerge -1 sys-devel/patch" solved my problem.