Created attachment 500058 [details] full build log Running from scipy source directory. /usr/lib64/python3.6/site-packages/numpy/distutils/system_info.py:644: UserWarning: Specified path /usr/lib64/python3.6/site-packages/numpy/__init__.py/include/python3.6m is invalid. return self.get_paths(self.section, key) /usr/lib64/python3.6/site-packages/numpy/distutils/system_info.py:644: UserWarning: Specified path /usr/local/include/python3.6m is invalid. return self.get_paths(self.section, key) "object of type 'type' has no len()" in evaluating 'len(list)' (available names: []) "object of type 'type' has no len()" in evaluating 'len(list)' (available names: []) "object of type 'type' has no len()" in evaluating 'len(list)' (available names: []) "object of type 'type' has no len()" in evaluating 'len(list)' (available names: []) "object of type 'type' has no len()" in evaluating 'len(list)' (available names: []) "object of type 'type' has no len()" in evaluating 'len(list)' (available names: []) error: Command "/usr/bin/gfortran -Wall -g -Wl,-O1 -Wl,--as-needed -shared /var/tmp/portage/sci-libs/scipy-0.19.1/work/scipy-0.19.1-python3_6/build/temp.linux-x86_64-3.6/var/tmp/portage/sci-libs/scipy-0.19.1/work/scipy-0.19.1-python3_6/build/src.linux-x86_64-3.6/src.linux-x86_64-3.6/scipy/linalg/_fblasmodule.o /var/tmp/portage/sci-libs/scipy-0.19.1/work/scipy-0.19.1-python3_6/build/temp.linux-x86_64-3.6/var/tmp/portage/sci-libs/scipy-0.19.1/work/scipy-0.19.1-python3_6/build/src.linux-x86_64-3.6/src.linux-x86_64-3.6/scipy/linalg/fortranobject.o /var/tmp/portage/sci-libs/scipy-0.19.1/work/scipy-0.19.1-python3_6/build/temp.linux-x86_64-3.6/var/tmp/portage/sci-libs/scipy-0.19.1/work/scipy-0.19.1-python3_6/scipy/_build_utils/src/wrap_dummy_g77_abi.o /var/tmp/portage/sci-libs/scipy-0.19.1/work/scipy-0.19.1-python3_6/build/temp.linux-x86_64-3.6/var/tmp/portage/sci-libs/scipy-0.19.1/work/scipy-0.19.1-python3_6/scipy/_build_utils/src/wrap_dummy_accelerate.o /var/tmp/portage/sci-libs/scipy-0.19.1/work/scipy-0.19.1-python3_6/build/temp.linux-x86_64-3.6/var/tmp/portage/sci-libs/scipy-0.19.1/work/scipy-0.19.1-python3_6/build/src.linux-x86_64-3.6/src.linux-x86_64-3.6/scipy/linalg/_fblas-f2pywrappers.o -L/usr/lib64 -L/usr/lib64 -L/var/tmp/portage/sci-libs/scipy-0.19.1/work/scipy-0.19.1-python3_6/build/temp.linux-x86_64-3.6 -lrefblas -lreflapack -lgslcblas -lrefblas -lpython3.6m -lgfortran -o /var/tmp/portage/sci-libs/scipy-0.19.1/work/scipy-0.19.1-python3_6/build/lib/scipy/linalg/_fblas.cpython-36m-x86_64-linux-gnu.so" failed with exit status 1 [31;01m*[0m ERROR: sci-libs/scipy-0.19.1::gentoo failed (compile phase): [31;01m*[0m (no error message) [31;01m*[0m [31;01m*[0m Call stack: [31;01m*[0m ebuild.sh, line 124: Called src_compile [31;01m*[0m environment, line 4323: Called distutils-r1_src_compile [31;01m*[0m environment, line 1290: Called _distutils-r1_run_foreach_impl 'python_compile' [31;01m*[0m environment, line 372: Called python_foreach_impl 'distutils-r1_run_phase' 'python_compile' [31;01m*[0m environment, line 3747: Called multibuild_foreach_variant '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile' [31;01m*[0m environment, line 2819: Called _multibuild_run '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile' [31;01m*[0m environment, line 2817: Called _python_multibuild_wrapper 'distutils-r1_run_phase' 'python_compile' [31;01m*[0m environment, line 853: Called distutils-r1_run_phase 'python_compile' [31;01m*[0m environment, line 1283: Called python_compile [31;01m*[0m environment, line 3335: Called distutils-r1_python_compile '-j' '5' 'config_fc' '--noopt' '--noarch' [31;01m*[0m environment, line 1158: Called esetup.py 'build' '-j' '5' 'config_fc' '--noopt' '--noarch' [31;01m*[0m environment, line 1843: Called die [31;01m*[0m The specific snippet of code: [31;01m*[0m "${@}" || die "${die_args[@]}"; [31;01m*[0m [31;01m*[0m If you need support, post the output of `emerge --info '=sci-libs/scipy-0.19.1::gentoo'`, [31;01m*[0m the complete build log and the output of `emerge -pqv '=sci-libs/scipy-0.19.1::gentoo'`. [31;01m*[0m The complete build log is located at '/var/tmp/portage/sci-libs/scipy-0.19.1/temp/build.log'. [31;01m*[0m The ebuild environment file is located at '/var/tmp/portage/sci-libs/scipy-0.19.1/temp/environment'. [31;01m*[0m Working directory: '/var/tmp/portage/sci-libs/scipy-0.19.1/work/scipy-0.19.1-python3_6' [31;01m*[0m S: '/var/tmp/portage/sci-libs/scipy-0.19.1/work/scipy-0.19.1'
emerge --info output Portage 2.3.12 (python 2.7.14-final-0, default/linux/amd64/13.0, gcc-5.4.0, glibc-2.25-r8, 4.12.6-gentoo x86_64) ================================================================= System uname: Linux-4.12.6-gentoo-x86_64-Intel-R-_Core-TM-_i5-2450M_CPU_@_2.50GHz-with-gentoo-2.4.1 KiB Mem: 3976500 total, 135624 free KiB Swap: 16777212 total, 16777212 free Timestamp of repository gentoo: Wed, 25 Oct 2017 12:45:01 +0000 Head commit of repository gentoo: 9ad31fe3b88753f72a49809a34ec3933bedb5f37 sh bash 4.4_p12 ld GNU ld (Gentoo 2.26.1 p1.0) 2.26.1 app-shells/bash: 4.4_p12::gentoo dev-java/java-config: 2.2.0-r3::gentoo dev-lang/perl: 5.26.1::gentoo dev-lang/python: 2.7.14::gentoo, 3.6.3::gentoo dev-util/cmake: 3.9.4::gentoo dev-util/pkgconfig: 0.29.2::gentoo sys-apps/baselayout: 2.4.1-r2::gentoo sys-apps/openrc: 0.33.1::gentoo sys-apps/sandbox: 2.12::gentoo sys-devel/autoconf: 2.13::gentoo, 2.69-r4::gentoo sys-devel/automake: 1.11.6-r2::gentoo, 1.13.4-r1::gentoo, 1.14.1-r1::gentoo, 1.15.1-r1::gentoo sys-devel/binutils: 2.26.1::gentoo, 2.27::gentoo, 2.28-r2::gentoo, 2.28.1::gentoo, 2.29::gentoo, 2.29.1-r1::gentoo sys-devel/gcc: 4.9.3::gentoo, 4.9.4::gentoo, 5.4.0-r3::gentoo sys-devel/gcc-config: 1.9.0::gentoo sys-devel/libtool: 2.4.6-r4::gentoo sys-devel/make: 4.2.1-r1::gentoo sys-kernel/linux-headers: 4.13::gentoo (virtual/os-headers) sys-libs/glibc: 2.25-r8::gentoo Repositories: gentoo location: /usr/portage sync-type: rsync sync-uri: rsync://rsync.us.gentoo.org/gentoo-portage priority: -1000 sync-rsync-extra-opts: gentoo-xvilka location: /usr/local/portage masters: gentoo priority: 0 gentoo-zh location: /var/lib/layman/gentoo-zh sync-type: laymansync sync-uri: git://github.com/microcai/gentoo-zh.git masters: gentoo priority: 50 lisp location: /var/lib/layman/lisp sync-type: laymansync sync-uri: https://anongit.gentoo.org/git/proj/lisp.git masters: gentoo priority: 50 mozilla location: /var/lib/layman/mozilla sync-type: laymansync sync-uri: git://anongit.gentoo.org/proj/mozilla.git masters: gentoo priority: 50 rust location: /var/lib/layman/rust sync-type: laymansync sync-uri: https://github.com/gentoo/gentoo-rust.git masters: gentoo priority: 50 science location: /var/lib/layman/science sync-type: laymansync sync-uri: https://anongit.gentoo.org/git/proj/sci.git masters: gentoo priority: 50 torbrowser location: /var/lib/layman/torbrowser sync-type: laymansync sync-uri: git://github.com/MeisterP/torbrowser-overlay.git masters: gentoo priority: 50 ACCEPT_KEYWORDS="amd64 ~amd64" ACCEPT_LICENSE="* -@EULA" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-O2 -march=corei7-avx -pipe" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/share/gnupg/qualified.txt /var/lib/i2pd/certificates" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c" CXXFLAGS="-O2 -march=corei7-avx -pipe" DISTDIR="/usr/portage/distfiles" FCFLAGS="-O2 -pipe" FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync multilib-strict news parallel-fetch preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr" FFLAGS="-O2 -pipe" GENTOO_MIRRORS="http://distfiles.gentoo.org" LANG="en_US.utf8" LDFLAGS="-Wl,-O1 -Wl,--as-needed" MAKEOPTS="-j5" PKGDIR="/usr/portage/packages" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git" PORTAGE_TMPDIR="/var/tmp" USE="7zip X a52 aac ace acl acpi alsa amd64 bash-completion bazaar berkdb bzip2 cairo cli compress consolekit cpio cracklib crypt curl curlwrappers cvs cxx dbus dirac djvu dri dts dvd fbcon fbcondecor ffmpeg flac fontconfig fortran ftp gdbm geoip gif git gnutls gtk guile hddtemp iconv icu idn imap ipv6 jabber jpeg jpeg2k laptop lm-sensors lua lzma lzo matroska mercurial mime mmx mng modules mp3 mp4 mpeg mpt multilib ncurses networking nls nptl opengl openmp pam pango pcre pdf perl png python qt3support qt4 rar readline rtsp sasl sbcl schroedinger seccomp session sockets sqlite sse sse2 ssl subversion svg tcpd theora tidy tiff truetype unicode usb v4l2 vaapi vim-syntax vorbis wifi x264 xattr xcb xcomposite xft xml xmlrpc xpm xsl zip zlib" ABI_X86="64" ALSA_CARDS="hda-intel" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="mmx mmxext sse sse2 sse3 ssse3 sse4_1 sse4_2 avx" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock isync itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="evdev synaptics" KERNEL="linux" L10N="en ru zh-CN ja" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="en ru zh_CN ja_JP" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-6" POSTGRES_TARGETS="postgres9_5" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_6" RUBY_TARGETS="ruby24" USERLAND="GNU" VIDEO_CARDS="intel" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" Unset: CC, CPPFLAGS, CTARGET, CXX, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS
Probably a duplicate of https://bugs.gentoo.org/614464.
(In reply to François Bissey from comment #2) > Probably a duplicate of https://bugs.gentoo.org/614464. this may be different, event with makeopts = j1, the error is same.
you mean MAKEOPTS="-j1" not "j1" I hope.
Right #614464 has an error with `fftpack/_fftpack.cpython-36m-x86_64-linux-gnu.so` which is different. But the kind of errors are very similar and could easily be both parallel build problem. But if you can really reproduce it at "-j1" then there is something deeper.
I can reproduce this with MAKEOPTS="-j1": /usr/lib64/python3.6/site-packages/numpy/distutils/system_info.py:644: UserWarning: Specified path /usr/lib64/python3.6/site-packages/numpy/__init__.py/include/python3.6m is invalid. return self.get_paths(self.section, key) "object of type 'type' has no len()" in evaluating 'len(list)' (available names: []) "object of type 'type' has no len()" in evaluating 'len(list)' (available names: []) "object of type 'type' has no len()" in evaluating 'len(list)' (available names: []) "object of type 'type' has no len()" in evaluating 'len(list)' (available names: []) "object of type 'type' has no len()" in evaluating 'len(list)' (available names: []) "object of type 'type' has no len()" in evaluating 'len(list)' (available names: []) error: Command "/usr/bin/gfortran -Wall -g -Wl,-O1 -Wl,--as-needed -shared /var/tmp/portage/sci-libs/scipy-0.19.1/work/scipy-0.19.1-python3_6/build/temp.linux-x86_64-3.6/var/tmp/portage/sci-libs/scipy-0.19.1/work/scipy-0.19.1-python3_6/build/src.linux-x86_64-3.6/src.linux-x86_64-3.6/scipy/linalg/_fblasmodule.o /var/tmp/portage/sci-libs/scipy-0.19.1/work/scipy-0.19.1-python3_6/build/temp.linux-x86_64-3.6/var/tmp/portage/sci-libs/scipy-0.19.1/work/scipy-0.19.1-python3_6/scipy/_build_utils/src/wrap_g77_abi_c.o /var/tmp/portage/sci-libs/scipy-0.19.1/work/scipy-0.19.1-python3_6/build/temp.linux-x86_64-3.6/var/tmp/portage/sci-libs/scipy-0.19.1/work/scipy-0.19.1-python3_6/build/src.linux-x86_64-3.6/src.linux-x86_64-3.6/scipy/linalg/fortranobject.o /var/tmp/portage/sci-libs/scipy-0.19.1/work/scipy-0.19.1-python3_6/build/temp.linux-x86_64-3.6/var/tmp/portage/sci-libs/scipy-0.19.1/work/scipy-0.19.1-python3_6/scipy/_build_utils/src/wrap_g77_abi_f.o /var/tmp/portage/sci-libs/scipy-0.19.1/work/scipy-0.19.1-python3_6/build/temp.linux-x86_64-3.6/var/tmp/portage/sci-libs/scipy-0.19.1/work/scipy-0.19.1-python3_6/scipy/_build_utils/src/wrap_dummy_accelerate.o /var/tmp/portage/sci-libs/scipy-0.19.1/work/scipy-0.19.1-python3_6/build/temp.linux-x86_64-3.6/var/tmp/portage/sci-libs/scipy-0.19.1/work/scipy-0.19.1-python3_6/build/src.linux-x86_64-3.6/src.linux-x86_64-3.6/scipy/linalg/_fblas-f2pywrappers.o -L/usr/lib64 -L/opt/intel/compilers_and_libraries_2016.2.181/linux/mkl/lib/intel64 -L/usr/lib64 -L/var/tmp/portage/sci-libs/scipy-0.19.1/work/scipy-0.19.1-python3_6/build/temp.linux-x86_64-3.6 -lm -lmkl_rt -lgslcblas -lm -lmkl_rt -lpython3.6m -lgfortran -o /var/tmp/portage/sci-libs/scipy-0.19.1/work/scipy-0.19.1-python3_6/build/lib/scipy/linalg/_fblas.cpython-36m-x86_64-linux-gnu.so" failed with exit status 1 * ERROR: sci-libs/scipy-0.19.1::gentoo failed (compile phase): * (no error message) * * Call stack: * ebuild.sh, line 124: Called src_compile * environment, line 4116: Called distutils-r1_src_compile * environment, line 1174: Called _distutils-r1_run_foreach_impl 'python_compile' * environment, line 359: Called python_foreach_impl 'distutils-r1_run_phase' 'python_compile' * environment, line 3562: Called multibuild_foreach_variant '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile' * environment, line 2703: Called _multibuild_run '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile' * environment, line 2701: Called _python_multibuild_wrapper 'distutils-r1_run_phase' 'python_compile' * environment, line 824: Called distutils-r1_run_phase 'python_compile' * environment, line 1167: Called python_compile * environment, line 3150: Called distutils-r1_python_compile '-j' '4' 'config_fc' '--noopt' '--noarch' * environment, line 1042: Called esetup.py 'build' '-j' '4' 'config_fc' '--noopt' '--noarch' * environment, line 1727: Called die * The specific snippet of code: * "${@}" || die "${die_args[@]}"; * * If you need support, post the output of `emerge --info '=sci-libs/scipy-0.19.1::gentoo'`, * the complete build log and the output of `emerge -pqv '=sci-libs/scipy-0.19.1::gentoo'`. * The complete build log is located at '/var/tmp/portage/sci-libs/scipy-0.19.1/temp/build.log'. * The ebuild environment file is located at '/var/tmp/portage/sci-libs/scipy-0.19.1/temp/environment'. * Working directory: '/var/tmp/portage/sci-libs/scipy-0.19.1/work/scipy-0.19.1-python3_6' * S: '/var/tmp/portage/sci-libs/scipy-0.19.1/work/scipy-0.19.1' ➜ ~ emerge --info '=sci-libs/scipy-0.19.1::gentoo' Portage 2.3.19 (python 3.6.4-final-0, default/linux/amd64/17.0/desktop/plasma/systemd, gcc-7.3.0, glibc-2.25-r10, 4.15.4-gentoo x86_64) ================================================================= System Settings ================================================================= System uname: Linux-4.15.4-gentoo-x86_64-Intel-R-_Core-TM-_i7-7500U_CPU_@_2.70GHz-with-gentoo-2.4.1 KiB Mem: 16292504 total, 1774792 free KiB Swap: 20971516 total, 20971516 free Timestamp of repository gentoo: Tue, 27 Feb 2018 07:26:30 +0000 Head commit of repository gentoo: 04a16f30e4a744c6e88bfd7a94693b97ac94b6d2 Head commit of repository flatpak-overlay: 8e157d3d671b3d9b1a265e99b581d8d746f70816 Head commit of repository go-overlay: 4a5c6e4a1a8ea82376bfa7731022947bfd38de48 Head commit of repository kde: 714b92b8bba0ff245eff407830ffe39f8c98ee5b Head commit of repository leezu-overlay: 087205457b2364ca16e2f532c8d86bbf52c59358 Head commit of repository qt: 2791628578a9a50862ece4c7641679220f331064 Head commit of repository rust: e863f8f7df7eb3adbd0664a59923ab76ced0f528 Head commit of repository sakaki-tools: 349be22c5aab1399ec5b346c5210077b37c91d8f Head commit of repository science: 3ea8b67d25a9dc2e67062a3e6556cf881a27225e Head commit of repository steam-overlay: 46d2624c5f248bf28e25c25e172e60c2eb988e5f sh bash 4.4_p12 ld GNU ld (Gentoo 2.29.1 p3) 2.29.1 app-shells/bash: 4.4_p12::gentoo dev-java/java-config: 2.2.0-r3::gentoo dev-lang/perl: 5.24.3::gentoo dev-lang/python: 2.7.14-r1::gentoo, 3.6.4::gentoo dev-util/cmake: 3.9.6::gentoo dev-util/pkgconfig: 0.29.2::gentoo sys-apps/baselayout: 2.4.1-r2::gentoo sys-apps/sandbox: 2.12::gentoo sys-devel/autoconf: 2.13::gentoo, 2.69-r4::gentoo sys-devel/automake: 1.11.6-r2::gentoo, 1.15.1-r1::gentoo sys-devel/binutils: 2.29.1-r1::gentoo sys-devel/gcc: 7.3.0::gentoo sys-devel/gcc-config: 1.8-r1::gentoo sys-devel/libtool: 2.4.6-r3::gentoo sys-devel/make: 4.2.1::gentoo sys-kernel/linux-headers: 4.13::gentoo (virtual/os-headers) sys-libs/glibc: 2.25-r10::gentoo Repositories: gentoo location: /usr/portage sync-type: git sync-uri: git@github.com:gentoo-mirror/gentoo.git priority: -1000 crossdev location: /usr/local/portage-crossdev masters: gentoo priority: 10 flatpak-overlay location: /var/lib/layman/flatpak-overlay sync-type: git sync-uri: git://github.com/fosero/flatpak-overlay.git masters: gentoo priority: 50 go-overlay location: /var/lib/layman/go-overlay sync-type: git sync-uri: https://github.com/Dr-Terrible/go-overlay.git masters: gentoo priority: 50 kde location: /var/lib/layman/kde sync-type: git sync-uri: https://github.com/gentoo/kde.git masters: gentoo priority: 50 leezu-overlay location: /var/lib/layman/leezu-overlay sync-type: git sync-uri: https://github.com/leezu/leezu-overlay.git masters: gentoo priority: 50 qt location: /var/lib/layman/qt sync-type: git sync-uri: https://anongit.gentoo.org/git/proj/qt.git masters: gentoo priority: 50 rust location: /var/lib/layman/rust sync-type: git sync-uri: https://github.com/gentoo/gentoo-rust.git masters: gentoo priority: 50 sakaki-tools location: /usr/local/portage/sakaki-tools sync-type: git sync-uri: https://github.com/sakaki-/sakaki-tools.git masters: gentoo priority: 50 science location: /var/lib/layman/science sync-type: git sync-uri: https://anongit.gentoo.org/git/proj/sci.git masters: gentoo priority: 50 steam-overlay location: /var/lib/layman/steam-overlay sync-type: git sync-uri: https://github.com/anyc/steam-overlay.git masters: gentoo priority: 50 Installed sets: @kde-frameworks-5.43, @kde-plasma-5.12 ACCEPT_KEYWORDS="amd64" ACCEPT_LICENSE="@FREE CC-Sampling-Plus-1.0 unRAR" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-march=native -O2 -pipe" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/lib64/libreoffice/program/sofficerc /usr/share/config /usr/share/gnupg/qualified.txt" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c" CXXFLAGS="-march=native -O2 -pipe -flifetime-dse=1 -fno-delete-null-pointer-checks" DISTDIR="/usr/portage/distfiles" EMERGE_DEFAULT_OPTS="" FCFLAGS="-O2 -pipe" FEATURES="assume-digests binpkg-logs compressdebug config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync multilib-strict news parallel-fetch preserve-libs protect-owned sandbox sfperms splitdebug strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr" FFLAGS="-O2 -pipe" GENTOO_MIRRORS="http://gentoo.aditsu.net:8000/" LANG="en_US.UTF-8" LDFLAGS="-Wl,-O1 -Wl,--as-needed" MAKEOPTS="-j4" PKGDIR="/usr/portage/packages" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git" PORTAGE_TMPDIR="/var/tmp" USE="X a52 aac acl acpi activities alsa amd64 berkdb bluetooth branding bzip2 cairo cdda cdr cjk cli crypt cups cxx dbus declarative dri dts dvd dvdr egl emacs emboss encode exif fam flac fontconfig fortran gdbm gif glamor gles gpm gtk iconv icu inotify ipv6 ja jemalloc jpeg kde kipi ko kwallet lcms ldap libnotify lm_sensors lzma mad mkl mng modules mp3 mp4 mpeg mtp multilib ncurses nls nptl ogg opengl openmp pam pango pcre pdf phonon plasma png policykit ppds pulseaudio qml qt5 readline sdl seccomp semantic-desktop sound spell sqlite ssl startup-notification svg systemd tcpd tiff touch touchscreen truetype udev udisks unicode upower usb vaapi vorbis vulkan wayland widgets wxwidgets x264 xattr xcb xcomposite xml xv xvid zeroconf zlib" ABI_X86="64" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="aes avx avx2 fma3 mmx mmxext popcnt sse sse2 sse3 sse4_1 sse4_2 ssse3" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock isync itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="synaptics evdev libinput" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-6 php7-0" POSTGRES_TARGETS="postgres9_5" PYTHON_SINGLE_TARGET="python3_6" PYTHON_TARGETS="python2_7 python3_6" RUBY_TARGETS="ruby23" USERLAND="GNU" VIDEO_CARDS="intel i965" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" Unset: CC, CPPFLAGS, CTARGET, CXX, INSTALL_MASK, LC_ALL, LINGUAS, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS ➜ ~ emerge -pqv '=sci-libs/scipy-0.19.1::gentoo' [ebuild U ] sci-libs/scipy-0.19.1 [0.16.1] USE="-doc -sparse {-test}" PYTHON_TARGETS="python2_7 python3_6 -python3_4 -python3_5"
Created attachment 521224 [details] build.log (tar.gz)
Does this bug persists with scipy-1.4.1?
Does this bug persist with scipy-1.4.1?
