Hi, I cannot emerge grass due to: make[4]: Entering directory '/scratch/var/tmp/portage/sci-geosciences/grass-7.2.0/work/grass-7.2.0/gui/wxpython' GISRC=/scratch/var/tmp/portage/sci-geosciences/grass-7.2.0/work/grass-7.2.0/dist.x86_64-pc-linux-gnu/demolocation/.grassrc72 GISBASE=/scratch/var/tmp/portage/sci-geosciences/grass-7.2.0/work/grass-7.2.0/dist.x86_64-pc-linux-gnu PATH="/scratch/var/tmp/portage/sci-geosciences/grass-7.2.0/work/grass-7.2.0/dist.x86_64-pc-linux-gnu/bin:/scratch/var/tmp/portage/sci-geosciences/grass-7.2.0/work/grass-7.2.0/dist.x86_64-pc-linux-gnu/bin:/scratch/var/tmp/portage/sci-geosciences/grass-7.2.0/work/grass-7.2.0/dist.x86_64-pc-linux-gnu/scripts:$PATH" PYTHONPATH="/scratch/var/tmp/portage/sci-geosciences/grass-7.2.0/work/grass-7.2.0/dist.x86_64-pc-linux-gnu/etc/python:/scratch/var/tmp/portage/sci-geosciences/grass-7.2.0/work/grass-7.2.0/dist.x86_64-pc-linux-gnu/gui/wxpython:$PYTHONPATH" LD_LIBRARY_PATH="/scratch/var/tmp/portage/sci-geosciences/grass-7.2.0/work/grass-7.2.0/dist.x86_64-pc-linux-gnu/bin:/scratch/var/tmp/portage/sci-geosciences/grass-7.2.0/work/grass-7.2.0/dist.x86_64-pc-linux-gnu/bin:/scratch/var/tmp/portage/sci-geosciences/grass-7.2.0/work/grass-7.2.0/dist.x86_64-pc-linux-gnu/scripts:/scratch/var/tmp/portage/sci-geosciences/grass-7.2.0/work/grass-7.2.0/dist.x86_64-pc-linux-gnu/lib:/scratch/var/tmp/portage/sci-geosciences/grass-7.2.0/work/grass-7.2.0/dist.x86_64-pc-linux-gnu/lib:" LC_ALL=C python2.7 core/toolboxes.py > xml/menudata.xml r.in.lidar: Unable to fetch interface description for command 'r.in.lidar'. Details: [Errno 2] No such file or directory v.in.lidar: Unable to fetch interface description for command 'v.in.lidar'. Details: [Errno 2] No such file or directory r3.in.lidar: Unable to fetch interface description for command 'r3.in.lidar'. Details: [Errno 2] No such file or directory v.out.lidar: Unable to fetch interface description for command 'v.out.lidar'. Details: [Errno 2] No such file or directory v.out.postgis: Unable to fetch interface description for command 'v.out.postgis'. Details: [Errno 2] No such file or directory r.surf.fractal: Unable to fetch interface description for command 'r.surf.fractal'. Details: [Errno 2] No such file or directory v.buffer: Unable to fetch interface description for command 'v.buffer'. Details: [Errno 2] No such file or directory i.zc: Unable to fetch interface description for command 'i.zc'. Details: [Errno 2] No such file or directory i.fft: Unable to fetch interface description for command 'i.fft'. Details: [Errno 2] No such file or directory i.ifft: Unable to fetch interface description for command 'i.ifft'. Details: [Errno 2] No such file or directory WARNING: Some addons failed when loading. Please consider to update your addons by running 'g.extension.all -f'. GISRC=/scratch/var/tmp/portage/sci-geosciences/grass-7.2.0/work/grass-7.2.0/dist.x86_64-pc-linux-gnu/demolocation/.grassrc72 GISBASE=/scratch/var/tmp/portage/sci-geosciences/grass-7.2.0/work/grass-7.2.0/dist.x86_64-pc-linux-gnu PATH="/scratch/var/tmp/portage/sci-geosciences/grass-7.2.0/work/grass-7.2.0/dist.x86_64-pc-linux-gnu/bin:/scratch/var/tmp/portage/sci-geosciences/grass-7.2.0/work/grass-7.2.0/dist.x86_64-pc-linux-gnu/bin:/scratch/var/tmp/portage/sci-geosciences/grass-7.2.0/work/grass-7.2.0/dist.x86_64-pc-linux-gnu/scripts:$PATH" PYTHONPATH="/scratch/var/tmp/portage/sci-geosciences/grass-7.2.0/work/grass-7.2.0/dist.x86_64-pc-linux-gnu/etc/python:/scratch/var/tmp/portage/sci-geosciences/grass-7.2.0/work/grass-7.2.0/dist.x86_64-pc-linux-gnu/gui/wxpython:$PYTHONPATH" LD_LIBRARY_PATH="/scratch/var/tmp/portage/sci-geosciences/grass-7.2.0/work/grass-7.2.0/dist.x86_64-pc-linux-gnu/bin:/scratch/var/tmp/portage/sci-geosciences/grass-7.2.0/work/grass-7.2.0/dist.x86_64-pc-linux-gnu/bin:/scratch/var/tmp/portage/sci-geosciences/grass-7.2.0/work/grass-7.2.0/dist.x86_64-pc-linux-gnu/scripts:/scratch/var/tmp/portage/sci-geosciences/grass-7.2.0/work/grass-7.2.0/dist.x86_64-pc-linux-gnu/lib:/scratch/var/tmp/portage/sci-geosciences/grass-7.2.0/work/grass-7.2.0/dist.x86_64-pc-linux-gnu/lib:" LC_ALL=C python2.7 core/toolboxes.py "validate" xml/menudata.xml make[4]: Leaving directory '/scratch/var/tmp/portage/sci-geosciences/grass-7.2.0/work/grass-7.2.0/gui/wxpython' # emerge --info Portage 2.3.6 (python 2.7.13-final-0, default/linux/amd64/13.0, gcc-4.9.4, glibc-2.24-r3, 4.10.12-default-pciehp x86_64) ================================================================= System uname: Linux-4.10.12-default-pciehp-x86_64-Intel-R-_Core-TM-_i7-2640M_CPU_@_2.80GHz-with-gentoo-2.4.1 KiB Mem: 16366476 total, 3547036 free KiB Swap: 0 total, 0 free Timestamp of repository gentoo: Sat, 15 Jul 2017 08:30:01 +0000 sh bash 4.4_p12 ld GNU ld (Gentoo 2.27 p1.0) 2.27 app-shells/bash: 4.4_p12::gentoo dev-java/java-config: 2.2.0-r3::gentoo dev-lang/perl: 5.24.1-r2::gentoo dev-lang/python: 2.7.13::gentoo, 3.4.5::gentoo, 3.5.3::gentoo, 3.6.1-r1::gentoo dev-util/cmake: 3.8.2::gentoo dev-util/pkgconfig: 0.29.2::gentoo sys-apps/baselayout: 2.4.1::gentoo sys-apps/openrc: 0.28::gentoo sys-apps/sandbox: 2.10-r4::gentoo sys-devel/autoconf: 2.13::gentoo, 2.69-r3::gentoo sys-devel/automake: 1.11.6-r2::gentoo, 1.12.6-r1::gentoo, 1.13.4-r1::gentoo, 1.14.1-r1::gentoo, 1.15.1::gentoo sys-devel/binutils: 2.25.1-r1::gentoo, 2.26.1::gentoo, 2.27::gentoo, 2.28-r2::gentoo sys-devel/gcc: 4.3.6-r1::gentoo, 4.4.7::gentoo, 4.6.4::gentoo, 4.7.4::gentoo, 4.8.5::gentoo, 4.9.4::gentoo, 5.3.0::gentoo, 5.4.0-r3::gentoo, 6.2.0-r1::gentoo, 6.3.0::gentoo, 7.1.0-r1::gentoo sys-devel/gcc-config: 1.8-r1::gentoo sys-devel/libtool: 2.4.6-r4::gentoo sys-devel/make: 4.2.1-r1::gentoo sys-kernel/linux-headers: 4.10::gentoo (virtual/os-headers) sys-libs/glibc: 2.24-r3::gentoo Repositories: gentoo location: /scratch/usr/portage sync-type: rsync sync-uri: rsync://rsync.gentoo.org/gentoo-portage priority: -1000 science location: /scratch/mmokrejs/proj/sci masters: gentoo priority: 0 layman location: /var/lib/layman masters: gentoo priority: 1 haskell location: /var/lib/layman/haskell masters: gentoo priority: 50 ACCEPT_KEYWORDS="amd64 ~amd64" ACCEPT_LICENSE="* -@EULA dlj-1.1 sun-bcla-java-vm Oracle-BCLA-JavaSE IBM-J1.6 skype-eula Nero-EULA-US AdobeFlash-10.3 skype-4.0.0.7-copyright AdobeFlash-11.x OPERA-2014 RAR Intel-SDP" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-O2 -pipe -mpclmul -mpopcnt -march=native -ftree-vectorize" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /etc/stunnel/stunnel.conf /usr/lib64/libreoffice/program/sofficerc /usr/share/easy-rsa /usr/share/gnupg/qualified.txt /usr/share/maven-bin-3.2/conf /usr/share/maven-bin-3.3/conf /var/bind /var/lib/hsqldb /var/spool/torque" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php5.6/ext-active/ /etc/php/apache2-php7.1/ext-active/ /etc/php/cgi-php5.6/ext-active/ /etc/php/cgi-php7.1/ext-active/ /etc/php/cli-php5.6/ext-active/ /etc/php/cli-php7.1/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c" CXXFLAGS="-O2 -pipe -mpclmul -mpopcnt -march=native -ftree-vectorize" DISTDIR="/scratch/usr/portage/distfiles" FCFLAGS="-O2 -pipe" FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news nostrip parallel-fetch preserve-libs protect-owned sandbox sfperms splitdebug strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr" FFLAGS="-O2 -pipe" GENTOO_MIRRORS="http://gentoo.wheel.sk/ http://ftp.fi.muni.cz/pub/linux/gentoo/ http://gentoo.mirror.web4u.cz/ rsync://gentoo.mirror.dkm.cz/gentoo/ ftp://gentoo.mirror.web4u.cz/" LDFLAGS="-Wl,-O1 -Wl,--as-needed" MAKEOPTS="-j2" PKGDIR="/usr/portage/packages" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git" PORTAGE_TMPDIR="/scratch/var/tmp" USE="R X acpi alsa amd64 amr apache apache2 apulse asm avx berkdb bindist bluetooth boost bzip2 cairo cgi cli coin consolekit cracklib crypt cryptlib cryptsetup cups cxx dbus device-mapper dhcp directfb dri drm dvd emboss encode fax fbcon ffmpeg flac fontconfig fortran gbm gcrypt gd gdbm geoip geolocation gimp glpk gmp gnutls gpm gtk hal hpijs hwdb iconv id3tag imaging innodb inotify java javafx javascript jce jpeg jpg js jscript keymap ladspa lapack laptop lcms libnotify lm_sensors mad matroska mmx modemmanager modules multicore multilib multimedia mysql ncurses networkmanager nfs nls nptl nptlonly nscd ntfs ntfsdecrypt ntfsprogs objc ocr ogg opengl openmp pam parport pcre pdf pdfimport pdl perl php plplot png policykit polkit postproc postscript ppds ppp pppd pptx python qt3support qt4 qt5 readline rendering resolvconf samba scanner sctp seccomp server session sha512 slideshow sna sndfile sqlite sse sse2 sse3 sse4_1 sse4_2 ssh ssh-agent ssl ssse3 startup-notification suexec svg syslog tcl tcpd threads tiff tk truetype udev unicode upower usb v4l v4l2 vim-syntax vnc wavpack wifi x11 xattr xcb xml xorg xrandr xv xvid xvmc zlib" ABI_X86="64 32" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="alias authz_host auth_basic auth_digest cgi cgid deflate dir env filter include info mem_cache mime mime_magic negotiation remoteip setenvif status userdir vhost_alias rewrite usertrack cache file_cache disk_cache charset_lite log_config log_forensic" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="aes avx mmx mmxext popcnt sse sse2 sse3 sse4_1 sse4_2 ssse3" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock isync itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 timing tsip tripmate tnt ublox ubx" GRUB_PLATFORMS="pc" INPUT_DEVICES="libinput keyboard mouse" KERNEL="linux" L10N="en-US en en-GB cs" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="en_US en_GB en cs" OFFICE_IMPLEMENTATION="libreoffice" POSTGRES_TARGETS="postgres9_5" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_5" RUBY_TARGETS="ruby20 ruby21 ruby23 ruby24" USERLAND="GNU" VIDEO_CARDS="vesa vmware fbdev intel i915 i965" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" USE_PYTHON="2.7" Unset: CC, CPPFLAGS, CTARGET, CXX, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LANG, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS
Created attachment 485084 [details] build.log.bz2
This is not a GRASS problem, but a half-updated system issue (C++ ABI mismatch). Rebuilding dev-python/wxpython should fix it. From the build log: Fatal Error: Mismatch between the program and library build versions detected. The library used 3.0 (wchar_t,compiler with C++ ABI 1009,wx containers,compatible with 2.8), and wxPython used 3.0 (wchar_t,compiler with C++ ABI 1002,wx containers,compatible with 2.8).
