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Bug 619678 - sci-libs/openfoam-2.4.0-r1 : * ERROR: sci-libs/openfoam-2.4.0-r1::gentoo failed (configure phase):
Summary: sci-libs/openfoam-2.4.0-r1 : * ERROR: sci-libs/openfoam-2.4.0-r1::gentoo fai...
Status: RESOLVED OBSOLETE
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: Normal normal
Deadline: 2019-10-28
Assignee: Patrick Lauer
URL:
Whiteboard:
Keywords: PMASKED
Depends on:
Blocks:
 
Reported: 2017-05-25 14:55 UTC by Toralf Förster
Modified: 2019-10-31 15:36 UTC (History)
3 users (show)

See Also:
Package list:
Runtime testing required: ---


Attachments
emerge-info.txt (emerge-info.txt,5.66 KB, text/plain)
2017-05-25 14:55 UTC, Toralf Förster
Details
emerge-history.txt (emerge-history.txt,359.14 KB, text/plain)
2017-05-25 14:55 UTC, Toralf Förster
Details
environment (environment,90.19 KB, text/plain)
2017-05-25 14:55 UTC, Toralf Förster
Details
etc.portage.tbz2 (etc.portage.tbz2,31.79 KB, application/x-bzip)
2017-05-25 14:55 UTC, Toralf Förster
Details
sci-libs:openfoam-2.4.0-r1:20170525-132711.log (sci-libs:openfoam-2.4.0-r1:20170525-132711.log,1.99 KB, text/plain)
2017-05-25 14:55 UTC, Toralf Förster
Details
temp.tbz2 (temp.tbz2,22.27 KB, application/x-bzip)
2017-05-25 14:55 UTC, Toralf Förster
Details

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Description Toralf Förster gentoo-dev 2017-05-25 14:55:06 UTC
>>> Source prepared.
>>> Configuring source in /var/tmp/portage/sci-libs/openfoam-2.4.0-r1/work/OpenFOAM-2.4.0 ...
 * ERROR: sci-libs/openfoam-2.4.0-r1::gentoo failed (configure phase):
 *   You need one of the following mpi implementations: openmpi or mpich2
 * 
 * Call stack:

  -------------------------------------------------------------------

  This is an unstable amd64 chroot image at a tinderbox (==build bot)
  name: desktop-gcc5_20170517-212644

  -------------------------------------------------------------------

gcc-config -l:
 [1] x86_64-pc-linux-gnu-5.4.0 *

Available Python interpreters, in order of preference:
  [1]   python3.4
  [2]   python3.6 (fallback)
  [3]   python2.7 (fallback)
  [4]   pypy3 (fallback)
Available Ruby profiles:
  [1]   ruby21 (with Rubygems)
  [2]   ruby22 (with Rubygems) *
java-config:
The following VMs are available for generation-2:
Comment 1 Toralf Förster gentoo-dev 2017-05-25 14:55:09 UTC
Created attachment 474268 [details]
emerge-info.txt
Comment 2 Toralf Förster gentoo-dev 2017-05-25 14:55:12 UTC
Created attachment 474270 [details]
emerge-history.txt
Comment 3 Toralf Förster gentoo-dev 2017-05-25 14:55:15 UTC
Created attachment 474272 [details]
environment
Comment 4 Toralf Förster gentoo-dev 2017-05-25 14:55:18 UTC
Created attachment 474274 [details]
etc.portage.tbz2
Comment 5 Toralf Förster gentoo-dev 2017-05-25 14:55:21 UTC
Created attachment 474276 [details]
sci-libs:openfoam-2.4.0-r1:20170525-132711.log
Comment 6 Toralf Förster gentoo-dev 2017-05-25 14:55:25 UTC
Created attachment 474278 [details]
temp.tbz2
Comment 7 Juergen Rose 2018-03-30 11:40:02 UTC
After installing sys-cluster/mpich2-1.5 the issue disappeared for me.
Comment 8 Juergen Rose 2018-03-30 12:34:00 UTC
openfoam-5.0 fails to emerge:
...
Making dependency list for source file ptscotchDecomp.C
x86_64-pc-linux-gnu-gcc: error: unrecognized command line option ‘--showme:compile’; did you mean ‘--compile’?
g++ -std=c++11 -m64 -Dlinux64 -DWM_ARCH_OPTION=64 -DWM_DP -DWM_LABEL_SIZE=32 -Wall -Wextra -Wold-style-cast -Wnon-virtual-dtor -Wno-unused-parameter -Wno-invalid-offsetof -O3  -DNoRepository -ftemplate-depth-100 -DOMPI_SKIP_MPICXX  -I/var/tmp/portage/sci-libs/openfoam-5.0/work/ThirdParty-5.0/platforms/linux64GccDPInt32/scotch_6.0.3/include/openmpi-system -I/var/tmp/portage/sci-libs/openfoam-5.0/work/ThirdParty-5.0/platforms/linux64GccDPInt32/scotch_6.0.3/include -I/usr/include/scotch -I../decompositionMethods/lnInclude -IlnInclude -I. -I/var/tmp/portage/sci-libs/openfoam-5.0/work/OpenFOAM-5.0/src/OpenFOAM/lnInclude -I/var/tmp/portage/sci-libs/openfoam-5.0/work/OpenFOAM-5.0/src/OSspecific/POSIX/lnInclude   -fPIC -c ptscotchDecomp.C -o /var/tmp/portage/sci-libs/openfoam-5.0/work/OpenFOAM-5.0/platforms/linux64GccDPInt32OptSYSTEMOPENMPI/src/parallel/decompose/ptscotchDecomp/ptscotchDecomp.o
In file included from /usr/include/mpi.h:1709:0,
                 from ptscotchDecomp.C:36:
/usr/include/mpicxx.h:2737:13: error: conflicting declaration of C function ‘void MPI::Init(int&, char**&)’
 extern void Init(int &, char **& );
             ^~~~
/usr/include/mpicxx.h:2736:13: note: previous declaration ‘void MPI::Init()’
 extern void Init(void);
             ^~~~
/usr/include/mpicxx.h:2739:12: error: conflicting declaration of C function ‘int MPI::Init_thread(int&, char**&, int)’
 extern int Init_thread(int &, char **&, int );
            ^~~~~~~~~~~
/usr/include/mpicxx.h:2738:12: note: previous declaration ‘int MPI::Init_thread(int)’
 extern int Init_thread(int);
            ^~~~~~~~~~~
Comment 9 Michał Górny archtester Gentoo Infrastructure gentoo-dev Security 2019-10-31 15:36:51 UTC
Package removed.