This does not look good although configure continues: >>> Emerging (1 of 1) sys-libs/pam-1.3.0::gentoo * Linux-PAM-1.3.0.tar.bz2 SHA256 SHA512 WHIRLPOOL size ;-) ... [ ok ] * Linux-PAM-1.3.0-docs.tar.bz2 SHA256 SHA512 WHIRLPOOL size ;-) ... [ ok ] >>> Unpacking source... >>> Unpacking Linux-PAM-1.3.0.tar.bz2 to /scratch/var/tmp/portage/sys-libs/pam-1.3.0/work >>> Unpacking Linux-PAM-1.3.0-docs.tar.bz2 to /scratch/var/tmp/portage/sys-libs/pam-1.3.0/work >>> Source unpacked in /scratch/var/tmp/portage/sys-libs/pam-1.3.0/work >>> Preparing source in /scratch/var/tmp/portage/sys-libs/pam-1.3.0/work/Linux-PAM-1.3.0 ... * Running elibtoolize in: Linux-PAM-1.3.0/ * Applying target-nm/2.4.2 patch ... * Applying ppc64le/2.4.4 patch ... * Running elibtoolize in: Linux-PAM-1.3.0/build-aux/ * Applying portage/1.2.0 patch ... * Applying sed/1.5.6 patch ... * Applying as-needed/2.4.2 patch ... >>> Source prepared. >>> Configuring source in /scratch/var/tmp/portage/sys-libs/pam-1.3.0/work/Linux-PAM-1.3.0 ... * abi_x86_32.x86: running multilib-minimal_abi_src_configure * econf: updating Linux-PAM-1.3.0/build-aux/config.sub with /usr/share/gnuconfig/config.sub * econf: updating Linux-PAM-1.3.0/build-aux/config.guess with /usr/share/gnuconfig/config.guess /scratch/var/tmp/portage/sys-libs/pam-1.3.0/work/Linux-PAM-1.3.0/configure --prefix=/usr --build=i686-pc-linux-gnu --host=i686-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --disable-dependency-tracking --disable-silent-rules --docdir=$(datarootdir)/doc/pam-1.3.0 --htmldir=$(docdir)/html --libdir=$(prefix)/lib32 --enable-securedir=/lib32/security --enable-isadir=. --enable-nls --disable-selinux --enable-cracklib --disable-audit --disable-debug --enable-db --disable-nis --enable-pie --with-db-uniquename=-6.0 --disable-prelude --disable-regenerate-docu checking for a BSD-compatible install... /usr/lib/portage/python2.7/ebuild-helpers/xattr/install -c ... checking for _FILE_OFFSET_BITS value needed for large files... 64 /scratch/var/tmp/portage/sys-libs/pam-1.3.0/work/Linux-PAM-1.3.0/configure: line 13167: test: too many arguments /scratch/var/tmp/portage/sys-libs/pam-1.3.0/work/Linux-PAM-1.3.0/configure: line 13194: test: too many arguments checking for CC_FOR_BUILD... x86_64-pc-linux-gnu-gcc -m32 ... * abi_x86_64.amd64: running multilib-minimal_abi_src_configure * econf: updating Linux-PAM-1.3.0/build-aux/config.sub with /usr/share/gnuconfig/config.sub * econf: updating Linux-PAM-1.3.0/build-aux/config.guess with /usr/share/gnuconfig/config.guess /scratch/var/tmp/portage/sys-libs/pam-1.3.0/work/Linux-PAM-1.3.0/configure --prefix=/usr --build=x86_64-pc-linux-gnu --host=x86_64-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --disable-dependency-tracking --disable-silent-rules --docdir=$(datarootdir)/doc/pam-1.3.0 --htmldir=$(docdir)/html --libdir=$(prefix)/lib64 --enable-securedir=/lib64/security --enable-isadir=. --enable-nls --disable-selinux --enable-cracklib --disable-audit --disable-debug --enable-db --disable-nis --enable-pie --with-db-uniquename=-6.0 --disable-prelude --disable-regenerate-docu ... checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) is GNU ld... yes checking for shared library run path origin... done /scratch/var/tmp/portage/sys-libs/pam-1.3.0/work/Linux-PAM-1.3.0/configure: line 16836: prefix: command not found checking for CFPreferencesCopyAppValue... no checking for CFLocaleCopyCurrent... no # emerge --info Portage 2.3.5 (python 2.7.13-final-0, default/linux/amd64/13.0, gcc-4.9.4, glibc-2.24-r1, 4.10.12-default-pciehp x86_64) ================================================================= System uname: Linux-4.10.12-default-pciehp-x86_64-Intel-R-_Core-TM-_i7-2640M_CPU_@_2.80GHz-with-gentoo-2.3 KiB Mem: 16366648 total, 7425428 free KiB Swap: 0 total, 0 free Timestamp of repository gentoo: Fri, 12 May 2017 09:00:01 +0000 sh bash 4.4_p12 ld GNU ld (Gentoo 2.27 p1.0) 2.27 app-shells/bash: 4.4_p12::gentoo dev-java/java-config: 2.2.0-r3::gentoo dev-lang/perl: 5.24.1-r1::gentoo dev-lang/python: 2.7.13::gentoo, 3.4.5::gentoo, 3.5.3::gentoo, 3.6.1::gentoo dev-util/cmake: 3.8.0::gentoo dev-util/pkgconfig: 0.29.2::gentoo sys-apps/baselayout: 2.3::gentoo sys-apps/openrc: 0.24.2::gentoo sys-apps/sandbox: 2.10-r4::gentoo sys-devel/autoconf: 2.13::gentoo, 2.69-r2::gentoo sys-devel/automake: 1.11.6-r2::gentoo, 1.12.6-r1::gentoo, 1.13.4-r1::gentoo, 1.14.1-r1::gentoo, 1.15-r2::gentoo sys-devel/binutils: 2.25.1-r1::gentoo, 2.26.1::gentoo, 2.27::gentoo sys-devel/gcc: 4.3.6-r1::gentoo, 4.4.7::gentoo, 4.6.4::gentoo, 4.7.4::gentoo, 4.8.5::gentoo, 4.9.4::gentoo, 5.3.0::gentoo, 5.4.0-r3::gentoo, 6.2.0-r1::gentoo, 6.3.0::gentoo, 7.1.0-r1::gentoo sys-devel/gcc-config: 1.8-r1::gentoo sys-devel/libtool: 2.4.6-r4::gentoo sys-devel/make: 4.2.1::gentoo sys-kernel/linux-headers: 4.10::gentoo (virtual/os-headers) sys-libs/glibc: 2.24-r1::gentoo Repositories: gentoo location: /scratch/usr/portage sync-type: rsync sync-uri: rsync://rsync.gentoo.org/gentoo-portage priority: -1000 science location: /scratch/mmokrejs/proj/sci masters: gentoo priority: 0 layman location: /var/lib/layman masters: gentoo priority: 1 haskell location: /var/lib/layman/haskell masters: gentoo priority: 50 ACCEPT_KEYWORDS="amd64 ~amd64" ACCEPT_LICENSE="* -@EULA dlj-1.1 sun-bcla-java-vm Oracle-BCLA-JavaSE IBM-J1.6 skype-eula Nero-EULA-US AdobeFlash-10.3 skype-4.0.0.7-copyright AdobeFlash-11.x OPERA-2014 RAR" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-O2 -pipe -maes -mpclmul -mpopcnt -mavx -march=native" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /etc/stunnel/stunnel.conf /usr/lib64/libreoffice/program/sofficerc /usr/share/easy-rsa /usr/share/gnupg/qualified.txt /usr/share/maven-bin-3.2/conf /usr/share/maven-bin-3.3/conf /var/bind /var/lib/hsqldb /var/spool/torque" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php5.6/ext-active/ /etc/php/cgi-php5.6/ext-active/ /etc/php/cli-php5.6/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c" CXXFLAGS="-O2 -pipe -maes -mpclmul -mpopcnt -mavx -march=native" DISTDIR="/scratch/usr/portage/distfiles" FCFLAGS="-O2 -pipe" FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news nostrip parallel-fetch preserve-libs protect-owned sandbox sfperms splitdebug strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr" FFLAGS="-O2 -pipe" GENTOO_MIRRORS="http://gentoo.wheel.sk/ http://ftp.fi.muni.cz/pub/linux/gentoo/ http://gentoo.mirror.web4u.cz/ rsync://gentoo.mirror.dkm.cz/gentoo/ ftp://gentoo.mirror.web4u.cz/" LDFLAGS="-Wl,-O1 -Wl,--as-needed" MAKEOPTS="-j2" PKGDIR="/usr/portage/packages" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git" PORTAGE_TMPDIR="/scratch/var/tmp" USE="R X acpi alsa amd64 amr apache apache2 apulse asm avx berkdb bindist bluetooth boost bzip2 cairo cgi cli coin consolekit cracklib crypt cryptlib cryptsetup cups cxx dbus device-mapper dhcp directfb dri drm dvd emboss encode fax fbcon ffmpeg flac fontconfig fortran gbm gcrypt gd gdbm geoip gimp glpk gmp gnutls gpm gtk hal hpijs hwdb iconv id3tag imaging innodb inotify java javafx javascript jce jpeg jpg js jscript keymap ladspa lapack laptop lcms libnotify lm_sensors mad matroska mmx modemmanager modules mpi mpich2 multicore multilib multimedia mysql ncurses networkmanager nfs nls nptl nptlonly nscd ntfs ntfsdecrypt ntfsprogs objc ocr ogg opengl openmp pam parport pcre pdf pdfimport pdl perl php plplot png policykit polkit postproc postscript ppds ppp pppd pptx python qt3support qt4 qt5 readline rendering resolvconf samba scanner sctp seccomp server session sha512 slideshow sna sndfile sqlite sse sse2 sse3 sse4_1 sse4_2 ssh ssh-agent ssl ssse3 startup-notification suexec svg syslog tcl tcpd threads tiff tk truetype udev unicode upower usb v4l v4l2 vim-syntax vnc wavpack wifi x11 xattr xcb xml xorg xrandr xv xvid xvmc zlib" ABI_X86="64 32" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="alias authz_host auth_basic auth_digest cgi cgid deflate dir env filter include info mem_cache mime mime_magic negotiation remoteip setenvif status userdir vhost_alias rewrite usertrack cache file_cache disk_cache charset_lite log_config log_forensic" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="aes avx mmx mmxext popcnt sse sse2 sse3 sse4_1 sse4_2 ssse3" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock isync itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 timing tsip tripmate tnt ublox ubx" GRUB_PLATFORMS="pc" INPUT_DEVICES="libinput keyboard mouse" KERNEL="linux" L10N="en-US en en-GB cs" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="en_US en_GB en cs" OFFICE_IMPLEMENTATION="libreoffice" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_5" RUBY_TARGETS="ruby21 ruby23 ruby24" USERLAND="GNU" VIDEO_CARDS="vesa vmware fbdev intel i915 i965" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" USE_PYTHON="2.7" Unset: CC, CPPFLAGS, CTARGET, CXX, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LANG, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS
Created attachment 472526 [details] build.log
Same with 1.2.1 ebuild.
I note ebuild has: --docdir='$(datarootdir)'/doc/${PF} --htmldir='$(docdir)/html' --libdir='$(prefix)'/$(get_libdir) These '' quotes looks fishy as configure reads: scratch/var/tmp/portage/sys-libs/pam-1.3.0/work/Linux-PAM-1.3.0/configure --prefix=/usr --build=i686-pc-linux-gnu --host=i686-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --disable-dependency-tracking --disable-silent-rules --docdir=$(datarootdir)/doc/pam-1.3.0 --htmldir=$(docdir)/html --libdir=$(prefix)/lib32 --enable-securedir=/lib32/security --enable-isadir=. --enable-nls --disable-selinux --enable-cracklib --disable-audit --disable-debug --enable-db --disable-nis --enable-pie --with-db-uniquename=-6.0 --disable-prelude --disable-regenerate-docu and later one can see: /scratch/var/tmp/portage/sys-libs/pam-1.3.0/work/Linux-PAM-1.3.0/configure: line 16836: prefix: command not found This is so for stable pam-1.2.1 too.
fixed in 1.3.1
