Bug 614972 – app-backup/spideroak-bin-6.1.5 fails to build

• Status: RESOLVED FIXED
• Product: Gentoo Linux

[Description Alix 2017-04-08 04:21:04 UTC]

[ebuild     U ] app-backup/spideroak-bin-6.1.5 [6.1.3] USE="-X -dbus" 

----------------------------------

 * Package:    app-backup/spideroak-bin-6.1.5
 * Repository: gentoo
 * Maintainer: [e-mail]
 * USE:        abi_x86_32 elibc_glibc kernel_linux userland_GNU x86
 * FEATURES:   preserve-libs sandbox userpriv usersandbox
>>> Unpacking spideroak-bin-6.1.5_x86.deb to /var/tmp/portage/app-backup/spideroak-bin-6.1.5/work
>>> Unpacking data.tar.gz to /var/tmp/portage/app-backup/spideroak-bin-6.1.5/work
cannot find section .rela.dyn
 * ERROR: app-backup/spideroak-bin-6.1.5::gentoo failed (prepare phase):
 *   patchelf failed on ./libstdc++.so.6
 * 
 * Call stack:
 *     ebuild.sh, line 115:  Called src_prepare
 *   environment, line 2065:  Called die
 * The specific snippet of code:
 *           patchelf --set-rpath '$ORIGIN' "${x}" || die "patchelf failed on ${x}";

----------------------------------

Portage 2.3.3 (python 2.7.12-final-0, default/linux/x86/13.0, gcc-4.9.4, glibc-2.23-r3, 4.9.16-gentoo i686)
=================================================================
                         System Settings
=================================================================
System uname: Linux-4.9.16-gentoo-i686-Intel-R-_Core-TM-_i3-5020U_CPU_@_2.20GHz-with-gentoo-2.3
KiB Mem:     8192380 total,   3122384 free
KiB Swap:    2097148 total,   2097148 free
Timestamp of repository gentoo: Sat, 08 Apr 2017 01:15:01 +0000
sh bash 4.3_p48-r1
ld GNU ld (Gentoo 2.25.1 p1.1) 2.25.1
app-shells/bash:          4.3_p48-r1::gentoo
dev-lang/perl:            5.22.3_rc4::gentoo
dev-lang/python:          2.7.12::gentoo, 3.4.5::gentoo
dev-util/pkgconfig:       0.28-r2::gentoo
sys-apps/baselayout:      2.3::gentoo
sys-apps/openrc:          0.23.2::gentoo
sys-apps/sandbox:         2.10-r3::gentoo
sys-devel/autoconf:       2.69::gentoo
sys-devel/automake:       1.11.6-r1::gentoo, 1.13.4::gentoo, 1.14.1::gentoo, 1.15::gentoo
sys-devel/binutils:       2.25.1-r1::gentoo, 2.26.1::gentoo
sys-devel/gcc:            4.9.3::gentoo, 4.9.4::gentoo
sys-devel/gcc-config:     1.7.3::gentoo
sys-devel/libtool:        2.4.6-r3::gentoo
sys-devel/make:           4.2.1::gentoo
sys-kernel/linux-headers: 4.4::gentoo (virtual/os-headers)
sys-libs/glibc:           2.23-r3::gentoo
Repositories:

gentoo
    location: /usr/portage
    sync-type: rsync
    sync-uri: rsync://rsync2.ru.gentoo.org/gentoo-portage/
    priority: -1000

x-portage
    location: /usr/local/portage
    masters: gentoo
    priority: 0

ACCEPT_KEYWORDS="x86"
ACCEPT_LICENSE="* -@EULA"
CBUILD="i686-pc-linux-gnu"
CFLAGS="-march=i686 -mtune=i686 -msse -msse2 -mssse3 -mmmx -O2 -fomit-frame-pointer -pipe -mfpmath=sse"
CHOST="i686-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/share/easy-rsa"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo"
CXXFLAGS="-march=i686 -mtune=i686 -msse -msse2 -mssse3 -mmmx -O2 -fomit-frame-pointer -pipe -mfpmath=sse"
DISTDIR="/usr/portage/distfiles"
FCFLAGS="-O2 -march=i686 -pipe"
FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-O2 -march=i686 -pipe"
GENTOO_MIRRORS="http://distfiles.gentoo.org"
LANG="en_US.UTF-8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j3"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git"
PORTAGE_TMPDIR="/var/tmp"
USE="acl berkdb bzip2 cli cracklib crypt cxx dri fortran gdbm iconv modules ncurses nls nptl openmp pam pcre readline seccomp session ssl unicode x86 xattr zlib" ABI_X86="32" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1 emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="mmx mmxext sse sse2" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock isync itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="libinput keyboard mouse" KERNEL="linux" L10N="en en_GB" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="en en_GB" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-6" PYTHON_SINGLE_TARGET="python3_4" PYTHON_TARGETS="python2_7 python3_4" RUBY_TARGETS="ruby21" USERLAND="GNU" VIDEO_CARDS="amdgpu fbdev intel nouveau radeon radeonsi vesa dummy v4l" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CC, CPPFLAGS, CTARGET, CXX, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON

[Comment 1 Fernandez-Alcon, Jose 2017-04-08 14:43:49 UTC]

Hi Alix,

Which version of patchelf are you using?

[Comment 2 Anthony Basile 2017-04-08 14:48:04 UTC]

I was not able to confirm this.

[Comment 3 Alix 2017-04-13 13:55:54 UTC]

sorry for the delay. anything else I should check?

# patchelf --version
patchelf 0.8

# emerge -uvaq1 patchelf

Nothing to merge; quitting.

[Comment 4 Alix 2017-04-13 14:15:31 UTC]

having the same error on my other up to date gentoo system (running in lxc).

[Comment 5 Fernandez-Alcon, Jose 2017-04-13 14:54:52 UTC]

Hi!

I cannot reproduce it on my systems. 

I am using patchelf 0.9. I am going to downgrade to 0.8 to check if I can reproduce the issue, as there was a bug with patchelf which looks very familiar.

Another question: are both of your systems 32bit?

Thanks!

[Comment 6 Alix 2017-04-13 19:23:00 UTC]

yep, both systems are 32bit.

upgrading patchelf to testing version 0.9 helped! thanks.

[Comment 7 Fernandez-Alcon, Jose 2017-04-14 12:22:26 UTC]

Excellent!

Can this bug be closed, then?