root@gentoo64 /home/giancarlo # emerge -vDU world >>> --upgradeonly implies --update... adding --update to options. Calculating world dependencies ...done! >>> emerge (1 of 51) net-nds/openldap-2.1.30-r2 to / >>> md5 src_uri ;-) openldap-2.1.30.tgz >>> Unpacking source... >>> Unpacking openldap-2.1.30.tgz to /var/tmp/portage/openldap-2.1.30-r2/work [...] checking for Berkeley DB link (default)... no checking for Berkeley DB link (-ldb42)... no checking for Berkeley DB link (-ldb-42)... no checking for Berkeley DB link (-ldb-4.2)... no checking for Berkeley DB link (-ldb-4-2)... no checking for Berkeley DB link (-ldb41)... no checking for Berkeley DB link (-ldb-41)... no checking for Berkeley DB link (-ldb-4.1)... no checking for Berkeley DB link (-ldb-4-1)... no checking for Berkeley DB link (-ldb40)... no checking for Berkeley DB link (-ldb-40)... no checking for Berkeley DB link (-ldb-4.0)... no checking for Berkeley DB link (-ldb-4-0)... no checking for Berkeley DB link (-ldb-4)... no checking for Berkeley DB link (-ldb4)... no checking for Berkeley DB link (-ldb)... no checking for Berkeley DB link (-ldb3)... no checking for Berkeley DB link (-ldb-3)... yes checking for Berkeley DB thread support... BerkeleyDB: Invalid argument no checking Berkeley DB version for BDB backend... no configure: error: BDB: BerkeleyDB version incompatible !!! ERROR: net-nds/openldap-2.1.30-r2 failed. !!! Function econf, Line 362, Exitcode 1 !!! econf failed Reproducible: Always Steps to Reproduce: 1. 2. 3.
pleaes include your 'emerge info' output, as well as what versions of sys-libs/db and sys-libs/gdbm you have installed. (the packages are slotted, so be sure to list all of them).
i'm having the same problem on my system. some info: 15:01 /usr/portage/sys-libs/db # epm -qa | grep ^db db-1.85-r1 db-3.2.9-r9 db-4.1.25_p1-r3 db-4.0.14-r3 15:02 /usr/portage/sys-libs/db # genlop db * sys-libs/db Wed Apr 9 11:50:05 2003 --> sys-libs/db-1.85-r1 Wed Apr 9 12:07:02 2003 --> sys-libs/db-3.2.9-r1 Wed Apr 23 03:12:48 2003 --> sys-libs/db-1.85-r1 Wed Apr 23 03:14:24 2003 --> sys-libs/db-3.2.9-r1 Wed May 21 20:51:53 2003 --> sys-libs/db-3.2.9-r2 Thu Aug 21 21:55:19 2003 --> sys-libs/db-3.2.9-r7 Wed Sep 10 14:52:48 2003 --> sys-libs/db-4.0.14-r2 Sat Mar 13 21:43:41 2004 --> sys-libs/db-4.1.25_p1-r3 Mon Mar 15 14:36:04 2004 --> sys-libs/db-4.0.14-r3 Mon Jun 28 21:57:32 2004 --> sys-libs/db-3.2.9-r9 merged totally 10 ebuilds. 15:02 /usr/portage/sys-libs/db # epm -qa | grep gdbm gdbm-1.8.0-r5 15:02 /usr/portage/sys-libs/db # emerge info Portage 2.0.50-r9 (default-x86-2004.2, gcc-3.3.3, glibc-2.3.3.20040420-r1, 2.4.26) ================================================================= System uname: 2.4.26 i686 Mobile Intel(R) Pentium(R) 4 - M CPU 2.00GHz Gentoo Base System version 1.4.16 distcc 2.13 i686-pc-linux-gnu (protocols 1 and 2) (default port 3632) [disabled] ccache version 2.3 [enabled] Autoconf: sys-devel/autoconf-2.59-r4 Automake: sys-devel/automake-1.8.5-r1 ACCEPT_KEYWORDS="x86" AUTOCLEAN="yes" CFLAGS="-march=pentium3 -O3 -pipe" CHOST="i686-pc-linux-gnu" COMPILER="gcc3" CONFIG_PROTECT="/etc /usr/X11R6/lib/X11/xkb /usr/kde/2/share/config /usr/kde/3.2/share/config /usr/kde/3/share/config /usr/lib/mozilla/defaults/pref /usr/share/config /usr/share/texmf/dvipdfm/config/ /usr/share/texmf/dvips/config/ /usr/share/texmf/tex/generic/config/ /usr/share/texmf/tex/platex/config/ /usr/share/texmf/xdvi/ /var/qmail/control" CONFIG_PROTECT_MASK="/etc/gconf /etc/terminfo /etc/env.d" CXXFLAGS="-O2 -mcpu=i686 -pipe" DISTDIR="/usr/portage/distfiles" FEATURES="autoaddcvs ccache sandbox" GENTOO_MIRRORS="http://gen2box.ath.cx/gentoo http://mirror.aarnet.edu.au/pub/gentoo http://gentoo.oregonstate.edu http://www.ibiblio.org/pub/Linux/distributions/gentoo" MAKEOPTS="-j2" PKGDIR="/usr/portage/packages" PORTAGE_TMPDIR="/var/tmp" PORTDIR="/usr/portage" PORTDIR_OVERLAY="" SYNC="rsync://rsync.gentoo.org/gentoo-portage" USE="X aalib acpi alsa apache2 arts avi berkdb bonobo cdr crypt cups dvd encode esd ethereal foomaticdb gdbm gif gnome gpm gtk gtk2 gtkhtml guile imlib java jpeg kde ldap libg++ libwww mad mailwrapper mikmod motif mozilla mpeg mysql ncurses nls oggvorbis opengl oss pam pcmcia pdflib perl plotutils png pnp python qt quicktime readline samba sasl slang spell sse ssl svga tcltk tcpd tetex truetype usb video_cards_radeon x86 xml2 xmms xv zlib" 15:09 /usr/portage/sys-libs/db # Also, interesting discussion on this issue on the forums from last year - they had some suggestions on how to get around the prob which I haven't tried yet - still seems like a bug though... http://forums.gentoo.org/viewtopic.php?t=96872&highlight=openldap hope this helps david
could you include the output of ls -l /usr/include/db* /usr/lib/libdb* i'm wondering if your berkdb is out of whack.
18:15 /usr/portage/sys-libs/db # ls -l /usr/include/db* lrwxrwxrwx 1 root root 8 Jun 28 21:57 /usr/include/db.h -> db4/db.h lrwxrwxrwx 1 root root 12 Jun 28 21:57 /usr/include/db_185.h -> db4/db_185.h /usr/include/db1: total 24 -rw-r--r-- 1 root root 8298 Apr 23 2003 db.h -rw-r--r-- 1 root root 4456 Apr 23 2003 mpool.h -rw-r--r-- 1 root root 2881 Apr 23 2003 ndbm.h /usr/include/db3: total 80 -r--r--r-- 1 root root 51043 Jun 28 21:56 db.h -r--r--r-- 1 root root 5657 Jun 28 21:56 db_185.h -r--r--r-- 1 root root 19263 Jun 28 21:56 db_cxx.h /usr/include/db4: total 112 -r--r--r-- 1 root root 1209 Mar 15 14:35 cxx_common.h -r--r--r-- 1 root root 2129 Mar 15 14:35 cxx_except.h -r--r--r-- 1 root root 70362 Mar 15 14:35 db.h -r--r--r-- 1 root root 5903 Mar 15 14:35 db_185.h -r--r--r-- 1 root root 22225 Mar 15 14:35 db_cxx.h /usr/include/db4.1: total 124 -r--r--r-- 1 root root 1212 Mar 13 21:43 cxx_common.h -r--r--r-- 1 root root 3967 Mar 13 21:43 cxx_except.h -r--r--r-- 1 root root 78588 Mar 13 21:43 db.h -r--r--r-- 1 root root 6210 Mar 13 21:43 db_185.h -r--r--r-- 1 root root 25120 Mar 13 21:43 db_cxx.h 18:15 /usr/portage/sys-libs/db # ls -l /usr/lib/libdb* lrwxrwxrwx 1 root root 11 Jun 28 21:56 /usr/lib/libdb-1.so -> libdb1.so.2 -rw-r--r-- 1 root root 742122 Jun 28 21:56 /usr/lib/libdb-3.2.a -rw-r--r-- 1 root root 629 Jun 28 21:56 /usr/lib/libdb-3.2.la -rwxr-xr-x 1 root root 531632 Jun 28 21:56 /usr/lib/libdb-3.2.so lrwxrwxrwx 1 root root 12 Jun 28 21:56 /usr/lib/libdb-3.so -> libdb-3.2.so -r--r--r-- 1 root root 943614 Mar 15 14:35 /usr/lib/libdb-4.0.a -r--r--r-- 1 root root 703 Mar 15 14:35 /usr/lib/libdb-4.0.la -r-xr-xr-x 1 root root 758929 Mar 15 14:35 /usr/lib/libdb-4.0.so -rw-r--r-- 1 root root 1088568 Mar 13 21:43 /usr/lib/libdb-4.1.a -rw-r--r-- 1 root root 703 Mar 13 21:43 /usr/lib/libdb-4.1.la -rwxr-xr-x 1 root root 886699 Mar 13 21:43 /usr/lib/libdb-4.1.so lrwxrwxrwx 1 root root 11 Jun 28 21:56 /usr/lib/libdb.a -> libdb-4.1.a lrwxrwxrwx 1 root root 12 Jun 28 21:57 /usr/lib/libdb.so -> libdb-4.1.so lrwxrwxrwx 1 root root 11 Jun 28 21:56 /usr/lib/libdb.so.2 -> libdb1.so.2 lrwxrwxrwx 1 root root 12 Jun 28 21:56 /usr/lib/libdb.so.3 -> libdb-3.2.so -rw-r--r-- 1 root root 851634 Apr 23 2003 /usr/lib/libdb1.a lrwxrwxrwx 1 root root 11 Jun 28 21:56 /usr/lib/libdb1.so -> libdb1.so.2 -rwxr-xr-x 1 root root 62897 Apr 23 2003 /usr/lib/libdb1.so.2 -rw-r--r-- 1 root root 807234 Jun 28 21:56 /usr/lib/libdb_cxx-3.2.a -rw-r--r-- 1 root root 649 Jun 28 21:56 /usr/lib/libdb_cxx-3.2.la -rwxr-xr-x 1 root root 574988 Jun 28 21:56 /usr/lib/libdb_cxx-3.2.so lrwxrwxrwx 1 root root 16 Jun 28 21:56 /usr/lib/libdb_cxx-3.so -> libdb_cxx-3.2.so -r--r--r-- 1 root root 1023170 Mar 15 14:35 /usr/lib/libdb_cxx-4.0.a -r--r--r-- 1 root root 731 Mar 15 14:35 /usr/lib/libdb_cxx-4.0.la -r-xr-xr-x 1 root root 826600 Mar 15 14:35 /usr/lib/libdb_cxx-4.0.so -rw-r--r-- 1 root root 1182026 Mar 13 21:43 /usr/lib/libdb_cxx-4.1.a -rw-r--r-- 1 root root 731 Mar 13 21:43 /usr/lib/libdb_cxx-4.1.la -rwxr-xr-x 1 root root 969976 Mar 13 21:43 /usr/lib/libdb_cxx-4.1.so lrwxrwxrwx 1 root root 15 Jun 28 21:56 /usr/lib/libdb_cxx.a -> libdb_cxx-4.1.a lrwxrwxrwx 1 root root 16 Jun 28 21:57 /usr/lib/libdb_cxx.so -> libdb_cxx-4.1.so lrwxrwxrwx 1 root root 16 Jun 28 21:56 /usr/lib/libdb_cxx.so.3 -> libdb_cxx-3.2.so -r--r--r-- 1 root root 1056086 Mar 15 14:35 /usr/lib/libdb_java-4.0.a -r--r--r-- 1 root root 738 Mar 15 14:35 /usr/lib/libdb_java-4.0.la -r-xr-xr-x 1 root root 849016 Mar 15 14:35 /usr/lib/libdb_java-4.0.so -rw-r--r-- 1 root root 1209234 Mar 13 21:43 /usr/lib/libdb_java-4.1.a -rw-r--r-- 1 root root 738 Mar 13 21:43 /usr/lib/libdb_java-4.1.la -rwxr-xr-x 1 root root 984335 Mar 13 21:43 /usr/lib/libdb_java-4.1.so lrwxrwxrwx 1 root root 16 Jun 28 21:56 /usr/lib/libdb_java.a -> libdb_java-4.1.a lrwxrwxrwx 1 root root 17 Jun 28 21:57 /usr/lib/libdb_java.so -> libdb_java-4.1.so 18:15 /usr/portage/sys-libs/db #
yes that's it. the db.h include file is for db4.0, and the libdb.so is for 4.1 :-(. do: emerge '=sys-libs/db-3*' '=sys-libs/db-4.0*' '=sys-libs/db-4.1*' and then your system should be in order and work right.
ok cool - thanks - emerging atm.... would this problem be one affecting everyone though, or is there something particular that i might have done to my system to make this happen? like i've never actually touched the db ebuilds manually before (only emerged as dependancies) and i was emerging openldap for the first time when this happened. does this mean something in the ebuilds might need fixing? well, anyways, thanks for the help in resolving this one for me, david
Depending on how actively your system is used, there have been a few cases on ~arch where the db symlinks accidently got messed around with (which lead to the creation of db.eclass to keep them sane).
oh ok - that makes sense - at least i know its not going to happen again!
ok, i'm closing this as invalid since your sys-libs/db was borked.
hmm, i thought i closed this before
*** Bug 90481 has been marked as a duplicate of this bug. ***
I'm having basically the same problem here, and none of the suggestions given here are actually working for me. It *looks* like all my db symlinks are set up properly, etc. Here's a plethora of information: checking for db.h... yes checking for Berkeley DB link (default)... no checking for Berkeley DB link (-ldb43)... no checking for Berkeley DB link (-ldb-43)... no checking for Berkeley DB link (-ldb-4.3)... no checking for Berkeley DB link (-ldb-4-3)... no checking for Berkeley DB link (-ldb42)... no checking for Berkeley DB link (-ldb-42)... no checking for Berkeley DB link (-ldb-4.2)... no checking for Berkeley DB link (-ldb-4-2)... no checking for Berkeley DB link (-ldb-4)... no checking for Berkeley DB link (-ldb4)... no checking for Berkeley DB link (-ldb)... yes checking for Berkeley DB version match... yes checking for Berkeley DB thread support... yes checking Berkeley DB version for BDB backend... no configure: error: BDB/HDB: BerkeleyDB version incompatible That's what happens at the end of the OpenLDAP configure step (this is with openldap-2.2.28, btw). Versions of db installed: # etcat -v sys-libs/db [ Results for search key : sys-libs/db ] [ Candidate applications found : 11 ] Only printing found installed programs. * sys-libs/db : [ ] 1.85-r1 (1) OVERLAY [ I] 1.85-r2 (1) OVERLAY [ ] 3.2.9-r7 (3) OVERLAY [ I] 3.2.9-r10 (3) OVERLAY [ ] 4.0.14-r2 (4) OVERLAY [ I] 4.0.14-r3 (4) OVERLAY [ ] 4.1.25_p1-r3 (4.1) OVERLAY [ I] 4.1.25_p1-r4 (4.1) OVERLAY [M~ ] 4.2.52_p1 (4.2) OVERLAY [ ] 4.2.52_p2 (4.2) OVERLAY [M~ ] 4.3.27 (4.3) OVERLAY I'm not sure what all that "OVERLAY" stuff means... I *do* have an overlay defined in make.conf, though I've double-checked that I don't have any db builds in there (nor have I in the past). My relevant entries in /usr/lib: lrwxrwxrwx 1 root root 11 Oct 11 08:45 /usr/lib/libdb-1.so -> libdb1.so.2* -rw-r--r-- 1 root root 734790 Oct 11 08:35 /usr/lib/libdb-3.2.a -rw-r--r-- 1 root root 629 Oct 11 08:35 /usr/lib/libdb-3.2.la -rwxr-xr-x 1 root root 523532 Oct 11 08:35 /usr/lib/libdb-3.2.so* lrwxrwxrwx 1 root root 12 Oct 11 08:45 /usr/lib/libdb-3.so -> libdb-3.2.so* -r--r--r-- 1 root root 925486 Oct 11 08:40 /usr/lib/libdb-4.0.a -r--r--r-- 1 root root 703 Oct 11 08:40 /usr/lib/libdb-4.0.la -r-xr-xr-x 1 root root 670900 Oct 11 08:40 /usr/lib/libdb-4.0.so* -rw-r--r-- 1 root root 1066708 Oct 11 08:45 /usr/lib/libdb-4.1.a -rw-r--r-- 1 root root 703 Oct 11 08:45 /usr/lib/libdb-4.1.la -rwxr-xr-x 1 root root 782148 Oct 11 08:45 /usr/lib/libdb-4.1.so* lrwxrwxrwx 1 root root 11 Oct 11 08:45 /usr/lib/libdb.a -> libdb-4.1.a lrwxrwxrwx 1 root root 12 Oct 11 08:45 /usr/lib/libdb.so -> libdb-4.1.so* lrwxrwxrwx 1 root root 11 Oct 11 08:45 /usr/lib/libdb.so.2 -> libdb1.so.2* lrwxrwxrwx 1 root root 12 Oct 11 08:45 /usr/lib/libdb.so.3 -> libdb-3.2.so* -rw-r--r-- 1 root root 915018 Oct 10 23:22 /usr/lib/libdb1.a lrwxrwxrwx 1 root root 11 Oct 11 08:45 /usr/lib/libdb1.so -> libdb1.so.2* -rwxr-xr-x 1 root root 57500 Oct 10 23:22 /usr/lib/libdb1.so.2* -rw-r--r-- 1 root root 799902 Oct 11 08:35 /usr/lib/libdb_cxx-3.2.a -rw-r--r-- 1 root root 649 Oct 11 08:35 /usr/lib/libdb_cxx-3.2.la -rwxr-xr-x 1 root root 570236 Oct 11 08:35 /usr/lib/libdb_cxx-3.2.so* lrwxrwxrwx 1 root root 16 Oct 11 08:45 /usr/lib/libdb_cxx-3.so -> libdb_cxx-3.2.so* -r--r--r-- 1 root root 1005090 Oct 11 08:40 /usr/lib/libdb_cxx-4.0.a -r--r--r-- 1 root root 731 Oct 11 08:40 /usr/lib/libdb_cxx-4.0.la -r-xr-xr-x 1 root root 727852 Oct 11 08:40 /usr/lib/libdb_cxx-4.0.so* -rw-r--r-- 1 root root 1165086 Oct 11 08:45 /usr/lib/libdb_cxx-4.1.a -rw-r--r-- 1 root root 731 Oct 11 08:45 /usr/lib/libdb_cxx-4.1.la -rwxr-xr-x 1 root root 849664 Oct 11 08:45 /usr/lib/libdb_cxx-4.1.so* lrwxrwxrwx 1 root root 15 Oct 11 08:45 /usr/lib/libdb_cxx.a -> libdb_cxx-4.1.a lrwxrwxrwx 1 root root 16 Oct 11 08:45 /usr/lib/libdb_cxx.so -> libdb_cxx-4.1.so* lrwxrwxrwx 1 root root 16 Oct 11 08:45 /usr/lib/libdb_cxx.so.3 -> libdb_cxx-3.2.so* -rw-r--r-- 1 root root 654 Oct 11 08:35 /usr/lib/libdb_java-3.2.la -rwxr-xr-x 1 root root 592520 Oct 11 08:35 /usr/lib/libdb_java-3.2.so* lrwxrwxrwx 1 root root 17 Oct 11 08:45 /usr/lib/libdb_java-3.so -> libdb_java-3.2.so* -r--r--r-- 1 root root 1036778 Oct 11 08:40 /usr/lib/libdb_java-4.0.a -r--r--r-- 1 root root 738 Oct 11 08:40 /usr/lib/libdb_java-4.0.la -r-xr-xr-x 1 root root 748716 Oct 11 08:40 /usr/lib/libdb_java-4.0.so* -rw-r--r-- 1 root root 1186182 Oct 11 08:45 /usr/lib/libdb_java-4.1.a -rw-r--r-- 1 root root 738 Oct 11 08:45 /usr/lib/libdb_java-4.1.la -rwxr-xr-x 1 root root 865780 Oct 11 08:45 /usr/lib/libdb_java-4.1.so* lrwxrwxrwx 1 root root 16 Oct 11 08:45 /usr/lib/libdb_java.a -> libdb_java-4.1.a lrwxrwxrwx 1 root root 17 Oct 11 08:45 /usr/lib/libdb_java.so -> libdb_java-4.1.so* lrwxrwxrwx 1 root root 17 Oct 11 08:45 /usr/lib/libdb_java.so.3 -> libdb_java-3.2.so* -r--r--r-- 1 root root 1064386 Oct 11 08:40 /usr/lib/libdb_tcl-4.0.a -r--r--r-- 1 root root 731 Oct 11 08:40 /usr/lib/libdb_tcl-4.0.la -r-xr-xr-x 1 root root 770036 Oct 11 08:40 /usr/lib/libdb_tcl-4.0.so* -rw-r--r-- 1 root root 1159300 Oct 11 08:45 /usr/lib/libdb_tcl-4.1.a -rw-r--r-- 1 root root 731 Oct 11 08:45 /usr/lib/libdb_tcl-4.1.la -rwxr-xr-x 1 root root 845800 Oct 11 08:45 /usr/lib/libdb_tcl-4.1.so* lrwxrwxrwx 1 root root 15 Oct 11 08:45 /usr/lib/libdb_tcl.a -> libdb_tcl-4.1.a lrwxrwxrwx 1 root root 16 Oct 11 08:45 /usr/lib/libdb_tcl.so -> libdb_tcl-4.1.so* -rw-r--r-- 1 root root 8240 Jul 1 2004 /usr/lib/libdbx.o ... and now stuff in /usr/include: # ls -l /usr/include/db* lrwxrwxrwx 1 root root 10 Oct 11 08:45 /usr/include/db.h -> db4.1/db.h lrwxrwxrwx 1 root root 14 Oct 11 08:45 /usr/include/db_185.h -> db4.1/db_185.h /usr/include/db1: total 48 drwxr-xr-x 2 root root 4096 Oct 10 23:22 ./ drwxr-xr-x 316 root root 20480 Oct 11 08:45 ../ -rw-r--r-- 1 root root 8298 Oct 10 23:22 db.h -rw-r--r-- 1 root root 4456 Oct 10 23:22 mpool.h -rw-r--r-- 1 root root 2881 Oct 10 23:22 ndbm.h /usr/include/db3: total 108 drwxr-xr-x 2 root root 4096 Oct 11 08:35 ./ drwxr-xr-x 316 root root 20480 Oct 11 08:45 ../ -r--r--r-- 1 root root 51043 Oct 11 08:35 db.h -r--r--r-- 1 root root 5657 Oct 11 08:35 db_185.h -r--r--r-- 1 root root 19263 Oct 11 08:35 db_cxx.h /usr/include/db4: total 140 drwxr-xr-x 2 root root 4096 Oct 11 08:40 ./ drwxr-xr-x 316 root root 20480 Oct 11 08:45 ../ -r--r--r-- 1 root root 1209 Oct 11 08:40 cxx_common.h -r--r--r-- 1 root root 2129 Oct 11 08:40 cxx_except.h -r--r--r-- 1 root root 70362 Oct 11 08:40 db.h -r--r--r-- 1 root root 5903 Oct 11 08:40 db_185.h -r--r--r-- 1 root root 22225 Oct 11 08:40 db_cxx.h /usr/include/db4.1: total 152 drwxr-xr-x 2 root root 4096 Oct 11 08:45 ./ drwxr-xr-x 316 root root 20480 Oct 11 08:45 ../ -r--r--r-- 1 root root 1212 Oct 11 08:45 cxx_common.h -r--r--r-- 1 root root 3967 Oct 11 08:45 cxx_except.h -r--r--r-- 1 root root 78588 Oct 11 08:45 db.h -r--r--r-- 1 root root 6210 Oct 11 08:45 db_185.h -r--r--r-- 1 root root 25120 Oct 11 08:45 db_cxx.h As you can tell from the timestamps, I've just recently tried doing the "emerge '=sys-libs/db-3*' '=sys-libs/db-4.0*' '=sys-libs/db-4.1*'" trick mentioned above. Any other ideas?
Hm, well perhaps I should have noticed that there was a 4.2 version of db which I could have tried. I installed that one and the openldap compile seems to be doing okay. Should that be a dependency in openldap?
