* Messages for package sci-biology/seqan-2.2.0: * This package will overwrite one or more files that may belong to other * packages (see list below). You can use a command such as `portageq * owners / <filename>` to identify the installed package that owns a * file. If portageq reports that only one package owns a file then do * NOT file a bug report. A bug report is only useful if it identifies at * least two or more packages that are known to install the same file(s). * If a collision occurs and you can not explain where the file came from * then you should simply ignore the collision since there is not enough * information to determine if a real problem exists. Please do NOT file * a bug report at https://bugs.gentoo.org/ unless you report exactly * which two packages install the same file(s). See * https://wiki.gentoo.org/wiki/Knowledge_Base:Blockers for tips on how * to solve the problem. And once again, please do NOT file a bug report * unless you have completely understood the above message. * * Detected file collision(s): * * /usr/share/cmake/Modules/FindSeqAn.cmake * /usr/share/pkgconfig/seqan-2.pc * * Searching all installed packages for file collisions... * * Press Ctrl-C to Stop * * sci-biology/seqan-2.1.1:2.1::gentoo * /usr/share/cmake/Modules/FindSeqAn.cmake * /usr/share/pkgconfig/seqan-2.pc
Should be fixed now. commit da90f594219f91865c4310e86f154dbc7dd8d3cd Author: David Seifert <soap@gentoo.org> Date: Wed Dec 14 21:28:14 2016 +0100 sci-biology/seqan: Add blocker for older SLOTs Gentoo-bug: 602508
Is the below the expected behaviour? Seems I am pushed to unmerge first existing 2.2.0 to upgrade to -r1?: # emerge -uN seqan * IMPORTANT: 20 news items need reading for repository 'gentoo'. * Use eselect news read to view new items. Calculating dependencies... done! [ebuild NS ] sci-biology/seqan-2.2.0-r1 [2.2.0] USE="-doc {-test}" CPU_FLAGS_X86="sse4_1" PYTHON_TARGETS="python2_7" [blocks B ] sci-biology/seqan:2.2 ("sci-biology/seqan:2.2" is hard blocking sci-biology/seqan-2.2.0-r1) * Error: The above package list contains packages which cannot be * installed at the same time on the same system. (sci-biology/seqan-2.2.0-r1:0/0::gentoo, ebuild scheduled for merge) pulled in by seqan sci-biology/seqan required by @selected
