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Bug 596892 - sys-apps/baselayout-2.3 - ERROR: sys-apps/baselayout-2.3::gentoo failed (setup phase): non-empty dir found where we needed a symlink: /usr/lib
Summary: sys-apps/baselayout-2.3 - ERROR: sys-apps/baselayout-2.3::gentoo failed (setu...
Status: RESOLVED INVALID
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: Normal normal (vote)
Assignee: William Hubbs
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2016-10-11 17:39 UTC by Jeroen Roovers (RETIRED)
Modified: 2018-07-26 04:59 UTC (History)
2 users (show)

See Also:
Package list:
Runtime testing required: ---


Attachments
build.log for amd 64 6core unit (build.log,1.55 KB, text/x-log)
2018-07-26 04:54 UTC, Geoff Madden
Details
die environment file (die.env,182.74 KB, text/plain)
2018-07-26 04:55 UTC, Geoff Madden
Details

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Description Jeroen Roovers (RETIRED) gentoo-dev 2016-10-11 17:39:07 UTC
>>> Emerging (1 of 20) sys-apps/baselayout-2.3::gentoo
 * baselayout-2.3.tar.bz2 SHA256 SHA512 WHIRLPOOL size ;-) ...                                    [ ok ]
 * Converting /usr/lib from a dir to a symlink
 * ERROR: sys-apps/baselayout-2.3::gentoo failed (setup phase):
 *   non-empty dir found where we needed a symlink: /usr/lib
 *
 * Call stack:
 *               ebuild.sh, line 115:  Called pkg_setup
 *   baselayout-2.3.ebuild, line  19:  Called multilib_layout
 *   baselayout-2.3.ebuild, line  68:  Called die
 * The specific snippet of code:
 *                                      die "non-empty dir found where we needed a symlink: ${prefix}lib"
 *
 * If you need support, post the output of `emerge --info '=sys-apps/baselayout-2.3::gentoo'`,
 * the complete build log and the output of `emerge -pqv '=sys-apps/baselayout-2.3::gentoo'`.
 * The complete build log is located at '/aches/gentoo/emergelogs/martijn/sys-apps:baselayout-2.3:20161011-173201.log'.
 * For convenience, a symlink to the build log is located at '/var/tmp/portage/sys-apps/baselayout-2.3/temp/build.log'.
 * The ebuild environment file is located at '/var/tmp/portage/sys-apps/baselayout-2.3/temp/die.env'.
 * Working directory: '/var/tmp/portage/sys-apps/baselayout-2.3/temp/cc-qa-check'
 * S: '/var/tmp/portage/sys-apps/baselayout-2.3/work/baselayout-2.3'
Comment 1 Jeroen Roovers (RETIRED) gentoo-dev 2016-10-11 17:54:11 UTC
Tue Oct 11 19:53:12 CEST 2016
emerge --info =sys-apps/baselayout-2.3
Portage 2.3.0 (python 3.4.3-final-0, default/linux/powerpc/ppc64/13.0/64bit-userland, gcc-5.4.0, glibc-2.22-r4, 4.4.6-gentoo ppc64)
=================================================================
                         System Settings
=================================================================
System uname: Linux-4.4.6-gentoo-ppc64-PPC970FX,_altivec_supported-with-gentoo-2.2
KiB Mem:     8096884 total,   2642380 free
KiB Swap:    1048572 total,   1004652 free
Timestamp of repository gentoo: Tue, 11 Oct 2016 15:00:02 +0000
sh bash 4.3_p48
ld GNU ld (Gentoo 2.25.1 p1.1) 2.25.1
distcc 3.2rc1 powerpc64-unknown-linux-gnu [enabled]
ccache version 3.2.4 [disabled]
app-shells/bash:          4.3_p48::gentoo
dev-java/java-config:     2.2.0-r3::gentoo
dev-lang/perl:            5.22.2::gentoo
dev-lang/python:          2.7.10-r1::gentoo, 3.4.3-r1::gentoo
dev-util/ccache:          3.2.4::gentoo
dev-util/cmake:           3.5.2-r1::gentoo
sys-apps/baselayout:      2.2::gentoo
sys-apps/openrc:          0.21.7::gentoo
sys-apps/sandbox:         2.10-r1::gentoo
sys-devel/autoconf:       2.13::gentoo, 2.69::gentoo
sys-devel/automake:       1.11.6-r1::gentoo, 1.14.1::gentoo, 1.15::gentoo
sys-devel/binutils:       2.24-r3::gentoo, 2.25.1-r1::gentoo
sys-devel/gcc:            4.7.4::gentoo, 4.8.5::gentoo, 4.9.3::gentoo, 4.9.4::gentoo, 5.4.0::gentoo
sys-devel/gcc-config:     1.7.3::gentoo
sys-devel/libtool:        2.4.6::gentoo
sys-devel/make:           4.1-r1::gentoo
sys-kernel/linux-headers: 4.3::gentoo (virtual/os-headers)
sys-libs/glibc:           2.22-r4::gentoo
Repositories:

gentoo
    location: /aches/gentoo/portage
    sync-type: rsync
    sync-uri: rsync://rsync.nl.gentoo.org/gentoo-portage
    priority: 0

JeR
    location: /aches/gentoo/local
    masters: gentoo
    priority: 10000

ACCEPT_KEYWORDS="ppc64"
ACCEPT_LICENSE="*"
CBUILD="powerpc64-unknown-linux-gnu"
CFLAGS="-O2 -ggdb -mcpu=G5 -mtune=G5 -Wall"
CHOST="powerpc64-unknown-linux-gnu"
CONFIG_PROTECT="/etc /etc/stunnel/stunnel.conf /usr/lib/ccache/bin /usr/lib/distcc/bin /usr/share/easy-rsa /usr/share/gnupg/qualified.txt /var/bind"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php5.6/ext-active/ /etc/php/apache2-php7.0/ext-active/ /etc/php/cgi-php5.6/ext-active/ /etc/php/cgi-php7.0/ext-active/ /etc/php/cli-php5.6/ext-active/ /etc/php/cli-php7.0/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c"
CXXFLAGS="-O2 -ggdb -mcpu=G5 -mtune=G5 -Wall"
DISTDIR="/aches/gentoo/distfiles"
EMERGE_DEFAULT_OPTS="--autounmask=n --keep-going"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-logs buildpkg cgroup compressdebug config-protect-if-modified distcc distlocks ebuild-locks fixlafiles merge-sync metadata-transfer multilib-strict news parallel-fetch preserve-libs protect-owned sandbox sfperms sign splitdebug strict test test-fail-continue unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync"
FFLAGS="-O2 -pipe"
GENTOO_MIRRORS=" http://mirror.netcologne.de/gentoo/ http://ftp.snt.utwente.nl/pub/os/linux/gentoo http://gentoo.tiscali.nl/ http://mirror.leaseweb.com/gentoo/ "
LANG="en_GB.utf8"
LC_ALL="en_US.UTF-8"
LDFLAGS="-Wl,-O1 -Wl,--hash-style=gnu -Wl,--as-needed"
MAKEOPTS="-j3"
PKGDIR="/aches/gentoo/packages/martijn"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git"
PORTAGE_TMPDIR="/var/tmp"
USE="X acl alsa altivec apache2 avahi berkdb botan bzip2 cairo cli consolekit cracklib crypt cups cxx dri drm evdev fontforge fortran fusionsound gadu gdbm gstreamer http2 ibm iconv idn introspection ipv6 jpeg jpeg2k kerberos lcms lensfun lua modules mpi multislot multitarget natspec ncurses nethack nls nptl offensive ofono-headset opengl openmp pam pcre png ppc64 qt3support qt4 r600-llvm-compiler raw readline rubberband rubytests scanner sdl session ssl tcl tcmalloc tcpd theora threads tiff tk truetype unicode valgrind vpx webp xattr zlib" ABI_PPC="64" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CURL_SSL="gnutls" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="evdev" KERNEL="linux" L10N="en_GB en nl" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="en_GB en nl" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-6" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_4" RUBY_TARGETS="ruby20 ruby21" USERLAND="GNU" VIDEO_CARDS="modesetting radeon nouveau" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CC, CPPFLAGS, CTARGET, CXX, INSTALL_MASK, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON
Comment 2 Jeroen Roovers (RETIRED) gentoo-dev 2016-10-12 10:06:15 UTC
I think this was the result of playing with multilib earlier in the year.
Comment 3 Geoff Madden 2018-07-26 04:53:10 UTC
it appears this hassle has cropped up again in 2.6-r1. Now whether it has anything todo with my inability to get a clean sync or not I'm not able to verify.
Comment 4 Geoff Madden 2018-07-26 04:54:44 UTC
Created attachment 541086 [details]
build.log for amd 64 6core unit
Comment 5 Geoff Madden 2018-07-26 04:55:30 UTC
Created attachment 541088 [details]
die environment file
Comment 6 Geoff Madden 2018-07-26 04:57:23 UTC
sent 11.04M bytes  received 53.57K bytes  4.44M bytes/sec
total size is 215.84M  speedup is 19.46
rsync error: some files/attrs were not transferred (see previous errors) (code 23) at main.c(1189) [sender=3.1.3]
q: Updating ebuild cache for /usr/portage ... 
q: Finished 35360 entries in 0.171764 seconds

Action: sync for repo: gentoo, returned code = 23
Comment 7 Geoff Madden 2018-07-26 04:59:21 UTC
I have set verify metamanifest  to no and will resync again later today to see if the fixes problem