[ 55/224] Linking build/examples/aubiomfcc 22:17:04 runner ['x86_64-pc-linux-gnu-gcc', '-march=native', '-O2', '-pipe', '-Wl,-O1', '-Wl,--as-needed', 'examples/aubiomfcc.c.2.o', 'examples/utils.c.1.o', 'examples/jackio.c.1.o', '-o', '/var/tmp/portage/media-libs/aubio-0.4.3/work/aubio-0.4.3/build/examples/aubiomfcc', '-Wl,-Bstatic', '-Wl,-Bdynamic', '-Lsrc', '-laubio', '-lm', '-lcblas', '-Wl,-O1', '-Wl,--as-needed'] src/libaubio.so: undefined reference to `catlas_sset' collect2: error: ld returned 1 exit status Waf: Leaving directory `/var/tmp/portage/media-libs/aubio-0.4.3/work/aubio-0.4.3/build' $ cat emerge-info.txt ----------------------------------------------------------------- This is an unstable amd64 chroot image (named amd64-gnome-unstable_20160821-184226) at a hardened host acting as a tinderbox. ----------------------------------------------------------------- USE flags defined in ... ... make.conf: USE=" pax_kernel xtpax -cdinstall -oci8 -bindist aes-ni bugzilla cdda -cgi dvd ecc evdev exif graphtft gtk3 gudev haptic hdf5 imap -imlib lapack minimal minizip modplug mp3 mpeg mpeg2 mysqli ois openexr openmpi pdo plasma postgres postproc pwquality python qemu qml -scripts server smime sockets ssh system-harfbuzz system-jpeg szip theora thinkpad timidity tls tools truetype uml v4l2 video vim vlc wxwidgets xscreensaver xvmc ziffy" ... /etc/portage/package.use/*: mail-mta/ssmtp ssl mta net-misc/wget ssl app-editors/emacs -dbus -svg -ssl -gtk -gtk3 dev-libs/boehm-gc threads dev-libs/libpcre pcre16 dev-util/cmake -qt4 -qt5 gnome-base/librsvg -tools media-libs/mesa -vaapi net-misc/iputils -caps -filecaps unmasked packages in /etc/portage/package.unmask/*: media-video/ffmpeg ----------------------------------------------------------------- gcc-config -l: [1] x86_64-pc-linux-gnu-4.9.3 [2] x86_64-pc-linux-gnu-5.4.0 * Available Java Virtual Machines: [1] icedtea-bin-7 system-vm [2] icedtea-bin-8 Available Python interpreters, in order of preference: [1] python3.4 [2] python2.7 (fallback) [3] jython2.7 (fallback) Available Ruby profiles: [1] ruby20 (with Rubygems) [2] ruby21 (with Rubygems) * ----------------------------------------------------------------- Portage 2.3.0 (python 3.4.5-final-0, default/linux/amd64/13.0/desktop/gnome, gcc-5.4.0, glibc-2.23-r2, 4.7.2-hardened x86_64) ================================================================= System Settings ================================================================= System uname: Linux-4.7.2-hardened-x86_64-Intel-R-_Core-TM-_i7-3930K_CPU_@_3.20GHz-with-gentoo-2.2 KiB Mem: 65285360 total, 1683744 free KiB Swap: 67108860 total, 67096132 free Timestamp of repository gentoo: Sat, 27 Aug 2016 19:05:00 +0000 sh bash 4.3_p46 ld GNU ld (Gentoo 2.26.1 p1.0) 2.26.1 app-shells/bash: 4.3_p46::gentoo dev-java/java-config: 2.2.0-r3::gentoo dev-lang/perl: 5.24.0-r1::gentoo dev-lang/python: 2.7.12::gentoo, 3.4.5::gentoo dev-util/cmake: 3.6.1::gentoo dev-util/pkgconfig: 0.29.1::gentoo sys-apps/baselayout: 2.2-r1::gentoo sys-apps/openrc: 0.21.4::gentoo sys-apps/sandbox: 2.10-r2::gentoo sys-devel/autoconf: 2.13::gentoo, 2.69-r2::gentoo sys-devel/automake: 1.11.6-r2::gentoo, 1.12.6-r1::gentoo, 1.13.4-r1::gentoo, 1.14.1-r1::gentoo, 1.15-r2::gentoo sys-devel/binutils: 2.26.1::gentoo sys-devel/gcc: 4.9.3::gentoo, 5.4.0::gentoo sys-devel/gcc-config: 1.8-r1::gentoo sys-devel/libtool: 2.4.6-r2::gentoo sys-devel/make: 4.2.1::gentoo sys-kernel/linux-headers: 4.7::gentoo (virtual/os-headers) sys-libs/glibc: 2.23-r2::gentoo Repositories: gentoo location: /usr/portage sync-type: rsync sync-uri: rsync://rsync.gentoo.org/gentoo-portage priority: 1 local location: /usr/local/portage masters: gentoo priority: 2 ACCEPT_KEYWORDS="amd64 ~amd64" ACCEPT_LICENSE="*" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-march=native -O2 -pipe" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /etc/stunnel/stunnel.conf /opt/openfire/resources/security/ /usr/share/config /usr/share/gnupg/qualified.txt /var/lib/hsqldb /var/rancid/.cloginrc /var/yp/Makefile" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c" CXXFLAGS="-march=native -O2 -pipe" DISTDIR="/var/tmp/distfiles" EMERGE_DEFAULT_OPTS="--verbose --verbose-conflicts --color=n --nospinner --tree --quiet-build" FCFLAGS="-O2 -pipe" FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles ipc-sandbox merge-sync network-sandbox parallel-fetch preserve-libs protect-owned sandbox sfperms strict test-fail-continue unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr" FFLAGS="-O2 -pipe" GENTOO_MIRRORS="http://ftp.uni-erlangen.de/pub/mirrors/gentoo rsync://mirror.netcologne.de/gentoo/ ftp://sunsite.informatik.rwth-aachen.de/pub/Linux/gor.bytemark.co.uk/gentoo/ rsync://ftp.snt.utwente.nl/gentoo" LANG="en_US.utf8" LDFLAGS="-Wl,-O1 -Wl,--as-needed" MAKEOPTS="-j1" PKGDIR="/usr/portage/packages" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git" PORTAGE_TMPDIR="/var/tmp" USE="X a52 aac acl acpi aes-ni alsa amd64 berkdb bluetooth branding bugzilla bzip2 cairo cdda cdr cli colord consolekit cracklib crypt cups cxx dbus dri dts dvd dvdr ecc eds emboss encode evdev evo exif fam firefox flac fortran gdbm gif glamor gnome gnome-keyring gnome-online-accounts gpm graphtft gstreamer gtk gtk3 gudev haptic hdf5 iconv imap introspection ipv6 jpeg lapack lcms ldap libnotify libsecret mad minimal minizip mmx mmxext mng modplug modules mp3 mp4 mpeg mpeg2 multilib mysqli nautilus ncurses nls nptl ogg ois openexr opengl openmp openmpi pam pango pax_kernel pcre pdf pdo plasma png policykit postgres postproc ppds pulseaudio pwquality python qemu qml qt3support qt4 readline sdl seccomp server session smime sockets spell sse sse2 ssh ssl startup-notification svg system-harfbuzz system-jpeg szip tcpd theora thinkpad tiff timidity tls tools tracker truetype udev udisks uml unicode upower usb v4l2 video vim vlc vorbis wxwidgets x264 xattr xcb xml xscreensaver xtpax xv xvid xvmc ziffy zlib" ABI_X86="64" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="aes avx mmx mmxext popcnt sse sse2 sse3 sse4_1 sse4_2 ssse3" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="keyboard mouse evdev" KERNEL="linux" L10N="br en fo hu mr my uz" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-6" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_4" RUBY_TARGETS="ruby20 ruby21" USERLAND="GNU" VIDEO_CARDS="amdgpu fbdev intel nouveau radeon radeonsi vesa dummy v4l" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" Unset: CC, CPPFLAGS, CTARGET, CXX, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON ================================================================= Package Settings ================================================================= media-libs/aubio-0.4.2::gentoo was built with the following: USE="python -doc -double-precision -examples -ffmpeg -fftw -jack -libav -libsamplerate -sndfile" ABI_X86="64" PYTHON_TARGETS="python2_7"
Created attachment 444286 [details] emerge-history.txt
Created attachment 444288 [details] environment
Created attachment 444290 [details] media-libs:aubio-0.4.3:20160827-201651.log
I have a similar error. 'MAKEOPTS=-j1 emerge -v1 aubio' fails with: ... [ 55/224] Linking build/examples/aubiomfcc 09:12:07 runner ['x86_64-pc-linux-gnu-gcc', '-march=amdfam10', '-O2', '-pipe', '-Wl,-O1', '-Wl,--as-needed', 'examples/aubiomfcc.c.2.o', 'examples/utils.c.1.o', 'examples/jackio.c.1.o', '-o', '/var/tmp/portage/media-libs/aubio-0.4.3/work/aubio-0.4.3/build/examples/aubiomfcc', '-Wl,-Bstatic', '-Wl,-Bdynamic', '-Lsrc', '-laubio', '-lm', '-lfftw3f', '-lsamplerate', '-lsndfile', '-lavcodec', '-lavformat', '-lavresample', '-lavutil', '-Wl,-O1', '-Wl,--as-needed'] src/libaubio.so: undefined reference to `cblas_sswap' src/libaubio.so: undefined reference to `catlas_sset' src/libaubio.so: undefined reference to `cblas_sdot' collect2: error: ld returned 1 exit status atlas is eselected: root@impala:/usr/local/portage/app-emulation(46)# eselect cblas list Available providers for cblas: [1] atlas * [2] atlas-threads [3] gsl [4] mkl-dynamic [5] mkl-dynamic-openmp [6] mkl-gcc-openmp [7] mkl-intel [8] mkl-intel-openmp [9] openblas-threads
Any news?
I too am having this issue. Clearly it needs to link to a cblas implementation for the tests and it's not, I'm just not sure what modification I should make to the ebuild to make it do that.
is this valid with 0.4.4?
(In reply to Pacho Ramos from comment #7) > is this valid with 0.4.4? Here, I had masked 0.4.3 but 0.4.4 and now 0.4.5 compile without a glitch...
OK, I close this then (also, it doesn't seem gcc5 related issue as I can compile even older stable version with that without issues)
