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Bug 588220 - app-editors/atom-1.8.0: Reproducible crash on startup
Summary: app-editors/atom-1.8.0: Reproducible crash on startup
Status: RESOLVED INVALID
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: AMD64 Linux
: Normal critical (vote)
Assignee: Gentoo Linux bug wranglers
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2016-07-07 12:14 UTC by Philipp Deppenwiese
Modified: 2016-07-07 13:09 UTC (History)
0 users

See Also:
Package list:
Runtime testing required: ---


Attachments

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Description Philipp Deppenwiese 2016-07-07 12:14:45 UTC
After the crash the chromium developer shell is open and shows an error.

Reproducible: Always

Steps to Reproduce:
1. Start Atom
Actual Results:  
Error: /usr/lib64/atom/app.asar.unpacked/node_modules/nodegit/build/Release/nodegit.node: undefined symbol: git_stash_apply_init_options
    at Error (native)
    at process.module.(anonymous function) [as dlopen] (ATOM_SHELL_ASAR.js:159:20)
    at Object.Module._extensions..node (module.js:450:18)
    at Object.module.(anonymous function) [as .node] (ATOM_SHELL_ASAR.js:170:18)
    at Module.load (module.js:356:32)
    at Function.Module._load (module.js:313:12)
    at Module.require (module.js:366:17)
    at require (/usr/lib64/atom/app.asar/src/native-compile-cache.js:50:27)
    at Object.<anonymous> (/usr/lib64/atom/app.asar/node_modules/nodegit/lib/nodegit.js:9:12)
    at Module._compile (/usr/lib64/atom/app.asar/src/native-compile-cache.js:103:30)
    at Object.defineProperty.value [as .js] (/usr/lib64/atom/app.asar/src/compile-cache.js:208:21)
    at Module.load (module.js:356:32)
    at Function.Module._load (module.js:313:12)
    at Module.require (module.js:366:17)
    at require (/usr/lib64/atom/app.asar/src/native-compile-cache.js:50:27)
    at Object.<anonymous> (/usr/lib64/atom/app.asar/src/git-repository-async.js:25:16)
    at Module._compile (/usr/lib64/atom/app.asar/src/native-compile-cache.js:103:30)
    at Object.defineProperty.value [as .js] (/usr/lib64/atom/app.asar/src/compile-cache.js:208:21)
    at Module.load (module.js:356:32)
    at Function.Module._load (module.js:313:12)
    at Module.require (module.js:366:17)
    at require (/usr/lib64/atom/app.asar/src/native-compile-cache.js:50:27)
    at Object.<anonymous> (/usr/lib64/atom/app.asar/src/git-repository.js:12:24)
    at Object.<anonymous> (/usr/lib64/atom/app.asar/src/git-repository.js:424:4)
    at Module._compile (/usr/lib64/atom/app.asar/src/native-compile-cache.js:103:30)
    at Object.defineProperty.value [as .js] (/usr/lib64/atom/app.asar/src/compile-cache.js:208:21)
    at Module.load (module.js:356:32)
    at Function.Module._load (module.js:313:12)
    at Module.require (module.js:366:17)
    at require (/usr/lib64/atom/app.asar/src/native-compile-cache.js:50:27)

Expected Results:  
Show atom startpage.

Portage 2.3.0 (python 2.7.10-final-0, hardened/linux/amd64, gcc-5.3.0, glibc-2.23-r2, 4.5.7-hardened x86_64)
=================================================================
                         System Settings
=================================================================
System uname: Linux-4.5.7-hardened-x86_64-Intel-R-_Core-TM-_i7-4710MQ_CPU_@_2.50GHz-with-gentoo-2.2
KiB Mem:    16105128 total,  11441032 free
KiB Swap:   16777212 total,  16777212 free
Timestamp of repository gentoo: Wed, 06 Jul 2016 18:30:01 +0000
sh bash 4.3_p42-r1
ld GNU ld (Gentoo 2.25.1 p1.1) 2.25.1
ccache version 3.2.5 [disabled]
app-shells/bash:          4.3_p42-r1::gentoo
dev-java/java-config:     2.2.0-r3::gentoo
dev-lang/perl:            5.20.2::gentoo
dev-lang/python:          2.7.10-r1::gentoo, 3.3.5-r3::gentoo, 3.4.3-r1::gentoo
dev-util/ccache:          3.2.5::gentoo
dev-util/cmake:           3.5.2-r1::gentoo
dev-util/pkgconfig:       0.28-r2::gentoo
sys-apps/baselayout:      2.2::gentoo
sys-apps/openrc:          0.19.1::gentoo
sys-apps/sandbox:         2.10-r1::gentoo
sys-devel/autoconf:       2.13::gentoo, 2.69::gentoo
sys-devel/automake:       1.11.6-r1::gentoo, 1.12.6::gentoo, 1.14.1::gentoo, 1.15::gentoo
sys-devel/binutils:       2.25.1-r1::gentoo
sys-devel/gcc:            4.9.3::gentoo, 5.3.0::gentoo, 5.4.0::gentoo
sys-devel/gcc-config:     1.7.3::gentoo
sys-devel/libtool:        2.4.6::gentoo
sys-devel/make:           4.1-r1::gentoo
sys-kernel/linux-headers: 4.3::gentoo (virtual/os-headers)
sys-libs/glibc:           2.23-r2::gentoo
Repositories:

gentoo
    location: /usr/portage
    sync-type: rsync
    sync-uri: rsync://rsync.gentoo.org/gentoo-portage
    priority: -1000

anyc
    location: /var/lib/layman/anyc
    sync-type: laymansync
    sync-uri: git://github.com/anyc/anyc-overlay.git
    masters: gentoo
    priority: 50

go-overlay
    location: /var/lib/layman/go-overlay
    sync-type: laymansync
    sync-uri: https://github.com/Dr-Terrible/go-overlay.git
    masters: gentoo
    priority: 50

hardened-development
    location: /var/lib/layman/hardened-development
    sync-type: laymansync
    sync-uri: git://anongit.gentoo.org/proj/hardened-dev.git
    masters: gentoo
    priority: 50

labor-overlay
    location: /var/lib/layman/labor-overlay
    sync-type: laymansync
    sync-uri: git://github.com/das-labor/labor-overlay.git
    masters: gentoo
    priority: 50

rust
    location: /var/lib/layman/rust
    sync-type: laymansync
    sync-uri: git://github.com/gentoo/gentoo-rust.git
    masters: gentoo
    priority: 50

ACCEPT_KEYWORDS="amd64"
ACCEPT_LICENSE="*"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-O2 -pipe -march=core-avx-i -mavx2"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/lib64/libreoffice/program/sofficerc /usr/share/gnupg/qualified.txt /var/lib/hsqldb"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c"
CXXFLAGS="-O2 -pipe -march=core-avx-i -mavx2"
DISTDIR="/usr/portage/distfiles"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-logs cgroup config-protect-if-modified distlocks fixlafiles ipc-sandbox merge-sync news parallel-fetch parallel-install preserve-libs protect-owned sandbox sfperms splitdebug strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync webrsync-gpg xattr"
FFLAGS="-O2 -pipe"
GENTOO_MIRRORS="http://linux.rz.ruhr-uni-bochum.de/download/gentoo-mirror/ http://ftp.halifax.rwth-aachen.de/gentoo/ ftp://ftp.halifax.rwth-aachen.de/gentoo/ rsync://ftp.halifax.rwth-aachen.de/gentoo/"
LANG="en_US.UTF-8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j9"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git"
PORTAGE_TMPDIR="/var/tmp"
USE="X acl amd64 berkdb bzip2 cli cracklib crypt cxx dbus dri fprint gdbm gnutls hardened iconv ipv6 justify mmx mmxext modules multilib ncurses networkmanager nls nptl opengl openmp pam pax_kernel pcre pie pulseaudio readline seccomp security session sse sse2 ssl ssp systemd tcpd unicode urandom wayland xattr xtpax zlib" ABI_X86="64" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="3dnow 3dnowext avx avx2 mmxext sse3 sse4_1 sse4_2 ssse3 mmx sse sse2" CURL_SSL="gnutls" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox ubx" GRUB_PLATFORMS="pc" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="de" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-5" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_4" QEMU_USER_TARGETS="x86_64" RUBY_TARGETS="ruby20 ruby21" USERLAND="GNU" VIDEO_CARDS="i965 intel" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
USE_PYTHON="2.7 3.3 3.4"
Unset:  CC, CPPFLAGS, CTARGET, CXX, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS

=================================================================
                        Package Settings
=================================================================

app-editors/atom-1.8.0::gentoo was built with the following:
USE="" ABI_X86="64"
Comment 1 Philipp Deppenwiese 2016-07-07 12:19:15 UTC
Hey

it seems that the nodegit version which is currently used by atom does not match the one which is defined in the ebuild. They used a non official version and the git_stash_apply_init_options function was removed since the 0.23 release.
Comment 2 Philipp Deppenwiese 2016-07-07 13:09:28 UTC
Hey,

something strange is going on libgit2-0.23.4 in gentoo doesn't contain the function: git_stash_apply_init_options Maybe it's a build issue of the hardened system. So no need to fix the atom ebuild here.