Gentoo Websites Logo
Go to: Gentoo Home Documentation Forums Lists Bugs Planet Store Wiki Get Gentoo!
Bug 582626 - dev-libs/boost-1.60.0: install failed: Header checksum mismatch, aborting.
Summary: dev-libs/boost-1.60.0: install failed: Header checksum mismatch, aborting.
Status: RESOLVED FIXED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: [OLD] Library (show other bugs)
Hardware: All Linux
: Normal normal (vote)
Assignee: C++ Team [disbanded]
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2016-05-10 05:15 UTC by Franz Trischberger
Modified: 2016-05-15 11:36 UTC (History)
1 user (show)

See Also:
Package list:
Runtime testing required: ---


Attachments
build.log.gz (build.log.gz,351.27 KB, application/gzip)
2016-05-10 05:15 UTC, Franz Trischberger
Details
build.log.gz (build.log.gz,351.27 KB, application/x-gzip)
2016-05-11 05:01 UTC, Franz Trischberger
Details
build.log.gz (build.log.gz,262.40 KB, application/gzip)
2016-05-12 03:46 UTC, Coacher
Details

Note You need to log in before you can comment on or make changes to this bug.
Description Franz Trischberger 2016-05-10 05:15:18 UTC
Created attachment 433816 [details]
build.log.gz

boost-1.60.0 was compiled already successfully on 10.03.2016. This is a re-install due to an icu-update. This issue is reproducible, so I don't think this is a hardware-failure.

[ebuild   R   ] dev-libs/boost-1.60.0  USE="context icu mpi nls python threads -debug -doc -static-libs -tools" ABI_X86="(64) -32 (-x32)" PYTHON_TARGETS="python2_7 python3_4 -python3_5"

emerge --info:
Portage 2.2.28 (python 3.4.3-final-0, default/linux/amd64/13.0/desktop, gcc-4.9.3, glibc-2.23-r2, 4.5.2-gentoo x86_64)
=================================================================
System uname: Linux-4.5.2-gentoo-x86_64-Intel-R-_Core-TM-_i3-2350M_CPU_@_2.30GHz-with-gentoo-2.2
KiB Swap:    5242876 total,   4493472 free
Timestamp of repository gentoo: Mon, 09 May 2016 08:03:47 +0000
sh bash 4.3_p42-r2
ld GNU gold (Gentoo 2.25.1 p1.1 2.25.1) 1.11
distcc 3.2rc1 x86_64-pc-linux-gnu [enabled]
app-shells/bash:          4.3_p42-r2::gentoo
dev-java/java-config:     2.2.0-r3::gentoo
dev-lang/perl:            5.20.2::gentoo
dev-lang/python:          2.7.10-r1::gentoo, 3.4.3-r1::gentoo
dev-util/cmake:           3.5.2::gentoo
dev-util/pkgconfig:       0.29.1::gentoo
sys-apps/baselayout:      2.2::gentoo
sys-apps/openrc:          0.20.5::gentoo
sys-apps/sandbox:         2.11-r2::gentoo
sys-devel/autoconf:       2.13::gentoo, 2.69::gentoo
sys-devel/automake:       1.11.6-r1::gentoo, 1.12.6::gentoo, 1.14.1::gentoo, 1.15::gentoo
sys-devel/binutils:       2.25.1-r1::gentoo
sys-devel/gcc:            4.9.3::gentoo
sys-devel/gcc-config:     1.7.3::gentoo
sys-devel/libtool:        2.4.6::gentoo
sys-devel/make:           4.1-r1::gentoo
sys-kernel/linux-headers: 4.3::gentoo (virtual/os-headers)
sys-libs/glibc:           2.23-r2::gentoo
Repositories:

gentoo
    location: /var/repositories/gentoo
    sync-type: git
    sync-uri: https://github.com/gentoo-mirror/gentoo
    priority: -1000

aidecoe
    location: /var/repositories/aidecoe
    sync-type: git
    sync-uri: git://github.com/aidecoe/aidecoe-overlay.git
    masters: gentoo

dlang
    location: /var/repositories/dlang
    sync-type: git
    sync-uri: https://github.com/gentoo/dlang.git
    masters: gentoo

ff2000
    location: /var/repositories/ff2000
    masters: gentoo
    eclass-overrides: qt kde lua

fflua
    location: /var/repositories/fflua
    masters: gentoo
    eclass-overrides: lua

gnome
    location: /var/repositories/gnome
    sync-type: git
    sync-uri: https://anongit.gentoo.org/git/proj/gnome.git
    masters: gentoo

kde
    location: /var/repositories/kde
    sync-type: git
    sync-uri: https://anongit.gentoo.org/git/proj/kde.git
    masters: gentoo

local
    location: /var/repositories/local
    masters: gentoo
    eclass-overrides: qt

lua
    location: /var/repositories/lua
    sync-type: git
    sync-uri: https://anongit.gentoo.org/git/proj/lua.git
    masters: gentoo

mv
    location: /var/repositories/mv
    sync-type: git
    sync-uri: https://anongit.gentoo.org/git/user/mv.git
    masters: gentoo

qt
    location: /var/repositories/qt
    sync-type: git
    sync-uri: https://github.com/gentoo/qt
    masters: gentoo

qutebrowser
    location: /var/repositories/qutebrowser
    masters: gentoo

ruby_ff
    location: /var/repositories/ruby_ff
    masters: gentoo

sage-on-gentoo
    location: /var/repositories/sagemath
    sync-type: git
    sync-uri: https://github.com/cschwan/sage-on-gentoo.git
    masters: gentoo science

science
    location: /var/repositories/science
    masters: gentoo

tlp
    location: /var/repositories/tlp
    sync-type: git
    sync-uri: https://github.com/dywisor/tlp-portage
    masters: gentoo

yngwin
    location: /var/repositories/yngwin
    sync-type: git
    sync-uri: https://anongit.gentoo.org/git/dev/yngwin.git
    masters: gentoo

zetok-overlay
    location: /var/repositories/zetok
    sync-type: git
    sync-uri: https://github.com/zetok/zetok-overlay
    masters: gentoo

ACCEPT_KEYWORDS="amd64"
ACCEPT_LICENSE="*"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=sandybridge -mno-aes -O2 -pipe -ggdb"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /lib/modules /usr/share/gnupg/qualified.txt"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c"
CXXFLAGS="-march=sandybridge -mno-aes -O2 -pipe -ggdb"
DISTDIR="/var/distfiles"
EMERGE_DEFAULT_OPTS="--quiet"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-logs compress-build-logs config-protect-if-modified distcc distlocks ebuild-locks fixlafiles keeptemp merge-sync news parallel-fetch preserve-libs protect-owned sfperms splitdebug strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-O2 -pipe"
GENTOO_MIRRORS="http://distfiles.gentoo.org"
LANG="de_DE.UTF-8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j11"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git"
PORTAGE_TMPDIR="/var/tmp"
USE="X a52 aac acl acpi alsa amd64 apm berkdb branding bzip2 cairo cdda cdr cli cracklib crypt cups cxx dbus directfb dri dts dvd dvdr emboss encode exif fam ffmpeg firefox flac fortran gdbm gif glamor gpm iconv infinality introspection ipv6 jpeg jpeg2k kipi lcdfilter lcms mad mmx mmxext mng modules mp3 mp4 mpeg multilib ncurses nls nptl ogg opengl openmp openrc pam pango pcre pdf png policykit ppds pulse pulseaudio readline sdl seccomp session spell sse sse2 sse3 sse4 sse4_1 ssl ssse3 svg systemd tcpd theora threads tiff truetype udev udisks unicode upower usb vaapi vorbis vpx x264 xattr xcb xcomposite xml xscreensaver xv xvid zlib zsh-completion" ABI_X86="64" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="krita sheets stage words" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="avx mmx mmxext popcnt sse sse2 sse3 sse4_1 sse4_2 ssse3" ELIBC="glibc" ENLIGHTENMENT_MODULES="appmenu backlight battery bluez4 clock conf conf-applications conf-bindings conf-comp conf-dialogs conf-display conf-interaction conf-intl conf-menus conf-paths conf-performance conf-randr conf-shelves conf-theme conf-wallpaper2 conf-window-manipulation conf-window-remembers connman contact cpufreq everything fileman fileman-opinfo gadman ibar ibox lokker mixer msgbus music-control notification pager pager16 pager-plain quickaccess shot start syscon systray tasks teamwork temperature tiling winlist wizard xkbswitch wl-desktop-shell wl-drm wl-fb wl-text-input wl-wl wl-x11 xwayland lua_targets_51 lua_targets_53" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="evdev wacom" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="de de_DE" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-5" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_4 python3_4" RUBY_TARGETS="ruby21 ruby22" SANE_BACKENDS="epson epson2" USERLAND="GNU" VIDEO_CARDS="intel i965" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CC, CPPFLAGS, CTARGET, CXX, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON
Comment 1 Coacher 2016-05-11 03:14:32 UTC
The attached build.log doesn't have any errors. Please attach a proper build.log. If your build.log is indeed empty, please copy-paste any errors from your screen to the comments.
Comment 2 Franz Trischberger 2016-05-11 04:56:57 UTC
No idea how that happened. Sorry. (log was not empty but compressed twice with gzip). I will attach the correct log now. Here is the complete error:

 * Header files have changed between ABIs.
 * --- /var/tmp/portage/dev-libs/boost-1.60.0/temp/.multilib_header_cksum	2016-03-10 17:06:13.015052915 +0100
 * +++ /var/tmp/portage/dev-libs/boost-1.60.0/temp/.multilib_header_cksum.new	2016-05-09 16:25:50.691526973 +0200
 * @@ -5295,9 +5295,9 @@
 *  3781680988 29726 /var/tmp/portage/dev-libs/boost-1.60.0/image/usr/include/boost/chrono/duration.hpp
 *  2324771053 29763 /var/tmp/portage/dev-libs/boost-1.60.0/image/usr/include/boost/fusion/container/set/detail/cpp03/preprocessed/set30.hpp
 *  2364315046 29771 /var/tmp/portage/dev-libs/boost-1.60.0/image/usr/include/boost/asio/impl/read_at.hpp
 * -2619324847 29784 /var/tmp/portage/dev-libs/boost-1.60.0/image/usr/include/boost/graph/r_c_shortest_paths.hpp
 *  3524645957 2979 /var/tmp/portage/dev-libs/boost-1.60.0/image/usr/include/boost/statechart/state.hpp
 *  4165206494 2980 /var/tmp/portage/dev-libs/boost-1.60.0/image/usr/include/boost/function_types/detail/pp_tags/preprocessed.hpp
 * +378354385 29800 /var/tmp/portage/dev-libs/boost-1.60.0/image/usr/include/boost/graph/r_c_shortest_paths.hpp
 *  3747399297 29805 /var/tmp/portage/dev-libs/boost-1.60.0/image/usr/include/boost/phoenix/bind/preprocessed/bind_function_object_30.hpp
 *  425052716 29819 /var/tmp/portage/dev-libs/boost-1.60.0/image/usr/include/boost/graph/max_cardinality_matching.hpp
 *  388168362 2983 /var/tmp/portage/dev-libs/boost-1.60.0/image/usr/include/boost/geometry/algorithms/detail/envelope/implementation.hpp
 * @@ -6848,7 +6848,7 @@
 *  825916571 4532 /var/tmp/portage/dev-libs/boost-1.60.0/image/usr/include/boost/units/physical_dimensions.hpp
 *  1168375050 4534 /var/tmp/portage/dev-libs/boost-1.60.0/image/usr/include/boost/graph/eccentricity.hpp
 *  3187357749 4535 /var/tmp/portage/dev-libs/boost-1.60.0/image/usr/include/boost/mpl/aux_/logical_op.hpp
 * -3208582684 45382 /var/tmp/portage/dev-libs/boost-1.60.0/image/usr/include/boost/graph/adjacency_matrix.hpp
 * +3739897657 45354 /var/tmp/portage/dev-libs/boost-1.60.0/image/usr/include/boost/graph/adjacency_matrix.hpp
 *  758952873 454 /var/tmp/portage/dev-libs/boost-1.60.0/image/usr/include/boost/coroutine/segmented_stack_allocator.hpp
 *  2916315006 4540 /var/tmp/portage/dev-libs/boost-1.60.0/image/usr/include/boost/geometry/strategies/cartesian/buffer_join_miter.hpp
 *  1203018604 4541 /var/tmp/portage/dev-libs/boost-1.60.0/image/usr/include/boost/spirit/home/karma/stream/format_manip.hpp
 * @@ -10284,7 +10284,6 @@
 *  3822459795 8804 /var/tmp/portage/dev-libs/boost-1.60.0/image/usr/include/boost/accumulators/statistics/tail_mean.hpp
 *  2525807858 8806 /var/tmp/portage/dev-libs/boost-1.60.0/image/usr/include/boost/spirit/home/classic/tree/parse_tree.hpp
 *  2883964730 8808 /var/tmp/portage/dev-libs/boost-1.60.0/image/usr/include/boost/geometry/policies/relate/intersection_points.hpp
 * -3578431531 8808 /var/tmp/portage/dev-libs/boost-1.60.0/image/usr/include/boost/python/object/class_metadata.hpp
 *  4184510916 881 /var/tmp/portage/dev-libs/boost-1.60.0/image/usr/include/boost/align/detail/aligned_alloc_posix.hpp
 *  2511436125 881 /var/tmp/portage/dev-libs/boost-1.60.0/image/usr/include/boost/config/platform/aix.hpp
 *  140044973 881 /var/tmp/portage/dev-libs/boost-1.60.0/image/usr/include/boost/geometry/multi/algorithms/detail/modify_with_predicate.hpp
 * @@ -10328,6 +10327,7 @@
 *  3463678439 8870 /var/tmp/portage/dev-libs/boost-1.60.0/image/usr/include/boost/mpl/aux_/preprocessed/bcc551/reverse_fold_impl.hpp
 *  3463678439 8870 /var/tmp/portage/dev-libs/boost-1.60.0/image/usr/include/boost/mpl/aux_/preprocessed/msvc70/reverse_fold_impl.hpp
 *  3463678439 8870 /var/tmp/portage/dev-libs/boost-1.60.0/image/usr/include/boost/mpl/aux_/preprocessed/no_ctps/reverse_fold_impl.hpp
 * +1704085556 8876 /var/tmp/portage/dev-libs/boost-1.60.0/image/usr/include/boost/python/object/class_metadata.hpp
 *  314026739 8877 /var/tmp/portage/dev-libs/boost-1.60.0/image/usr/include/boost/numeric/odeint/iterator/impl/const_step_iterator_impl.hpp
 *  617658639 888 /var/tmp/portage/dev-libs/boost-1.60.0/image/usr/include/boost/function_types/function_arity.hpp
 *  3546247378 8880 /var/tmp/portage/dev-libs/boost-1.60.0/image/usr/include/boost/fusion/tuple/detail/preprocessed/make_tuple10.hpp
 * ERROR: dev-libs/boost-1.60.0::gentoo failed (install phase):
 *   Header checksum mismatch, aborting.
 * 
 * Call stack:
 *     ebuild.sh, line  133:  Called src_install
 *   environment, line 4433:  Called multilib-minimal_src_install
 *   environment, line 2543:  Called multilib_foreach_abi 'multilib-minimal_abi_src_install'
 *   environment, line 2737:  Called multibuild_foreach_variant '_multilib_multibuild_wrapper' 'multilib-minimal_abi_src_install'
 *   environment, line 2373:  Called _multibuild_run '_multilib_multibuild_wrapper' 'multilib-minimal_abi_src_install'
 *   environment, line 2371:  Called _multilib_multibuild_wrapper 'multilib-minimal_abi_src_install'
 *   environment, line  455:  Called multilib-minimal_abi_src_install
 *   environment, line 2540:  Called multilib_check_headers
 *   environment, line 2599:  Called die
 * The specific snippet of code:
 *               die "Header checksum mismatch, aborting.";
Comment 3 Franz Trischberger 2016-05-11 05:01:08 UTC
Created attachment 433902 [details]
build.log.gz

Hopefully the correct log now.
The issue might be the gtk3 file choser (that comes with firefox-46): it implements a weird double-click that sometimes acts like singleclick. It seems I got screwed up there, because I nearly hit the wrong dirs, again...
Comment 4 Franz Trischberger 2016-05-11 05:12:14 UTC
I really don't know what's happening here...
I copied the correct build.log.gz to a new and save directory. I went there on console, made a copy of the gzipped log, unpacked it - there was my log. Then I attached the other (originla) file to this bug report, downloaded it again, and now the file is gzipped twice! Is that a (misbehaving) bugzilla feature?
The build.log from yesterday btw. also is the correct log. I just seem to have made an error today when downloading it/unpacking it. Probably it's still too early ;)
Comment 5 Coacher 2016-05-12 03:46:00 UTC
Created attachment 434026 [details]
build.log.gz
Comment 6 Coacher 2016-05-12 03:47:11 UTC
It seems this happened again. I reattached your build.log myself. Now everything seems to be fine.
Comment 7 Franz Trischberger 2016-05-13 06:04:46 UTC
I synced again, updated kernel from 4.5.2 to 4.5.3, rebooted - and boost magically succeeded installation. Weird... But at least RESOLVED FIXED.