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Bug 580324 - >=dev-db/mariadb-10[oqgraph] with dev-libs/boost-1.60 - mysql/storage/oqgraph/oqgraph_shim.h:261:13: error: ‘no_graph_bundle’ does not name a type
Summary: >=dev-db/mariadb-10[oqgraph] with dev-libs/boost-1.60 - mysql/storage/oqgraph...
Status: RESOLVED UPSTREAM
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: Normal major (vote)
Assignee: Gentoo Linux MySQL bugs team
URL:
Whiteboard:
Keywords:
: 583356 (view as bug list)
Depends on:
Blocks:
 
Reported: 2016-04-17 12:44 UTC by Alexey Skobkin
Modified: 2016-06-28 14:01 UTC (History)
5 users (show)

See Also:
Package list:
Runtime testing required: ---


Attachments
build.log.gz (build.log.gz,79.90 KB, application/gzip)
2016-04-17 12:44 UTC, Alexey Skobkin
Details
build.log (build.log.tar.gz,48.13 KB, application/gzip)
2016-04-18 11:13 UTC, Berthold Humkamp
Details
build-abi_x86_64.amd64.log (build-abi_x86_64.amd64.log.tar.gz,47.63 KB, application/gzip)
2016-04-18 11:14 UTC, Berthold Humkamp
Details
emerge --info ... (emerge.info,9.98 KB, application/x-info)
2016-04-18 11:16 UTC, Berthold Humkamp
Details
emerge -pqv ... (emerge.pqv,380 bytes, text/plain)
2016-04-18 11:16 UTC, Berthold Humkamp
Details
build environment (environment,186.29 KB, text/plain)
2016-04-18 11:19 UTC, Berthold Humkamp
Details
Patch fixing build issue (fix-ftbfs-boost1.60.patch,592 bytes, patch)
2016-05-22 11:19 UTC, Andrzej Kardas
Details | Diff
build.log (build.log.tar.gz,47.37 KB, application/gzip)
2016-05-27 04:46 UTC, Berthold Humkamp
Details
build-abi_x86_64.amd64.log (build-abi_x86_64.amd64.log.tar.gz,46.86 KB, application/gzip)
2016-05-27 04:47 UTC, Berthold Humkamp
Details

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Description Alexey Skobkin 2016-04-17 12:44:00 UTC
Created attachment 430934 [details]
build.log.gz

Last month or more I can't rebuild latest version of mariadb. It was built some time ago but after some package updates it was queued to rebuild and failed each time when I tried to compile it.

Portage 2.2.28 (python 3.4.3-final-0, default/linux/amd64/13.0/desktop, gcc-5.3.0, glibc-2.23-r1, 4.5.0-gentoo-r1-skobkin x86_64)
=================================================================
System uname: Linux-4.5.0-gentoo-r1-skobkin-x86_64-Intel-R-_Core-TM-_i7-4820K_CPU_@_3.70GHz-with-gentoo-2.2
KiB Mem:    32881260 total,    627188 free
KiB Swap:          0 total,         0 free
Timestamp of repository gentoo: Sun, 17 Apr 2016 11:15:01 +0000
sh bash 4.3_p42-r2
ld GNU ld (Gentoo 2.25.1 p1.1) 2.25.1
distcc 3.2rc1 x86_64-pc-linux-gnu [disabled]
ccache version 3.2.4 [disabled]
app-shells/bash:          4.3_p42-r2::gentoo
dev-java/java-config:     2.2.0-r3::gentoo
dev-lang/perl:            5.22.1::gentoo
dev-lang/python:          2.7.11-r2::gentoo, 3.4.3-r7::gentoo, 3.5.1-r2::gentoo
dev-util/ccache:          3.2.4::gentoo
dev-util/cmake:           3.5.1::gentoo
dev-util/pkgconfig:       0.29.1::gentoo
sys-apps/baselayout:      2.2::gentoo
sys-apps/openrc:          0.20.5::gentoo
sys-apps/sandbox:         2.10-r2::gentoo
sys-devel/autoconf:       2.13::gentoo, 2.69-r2::gentoo
sys-devel/automake:       1.11.6-r2::gentoo, 1.12.6-r1::gentoo, 1.13.4-r1::gentoo, 1.14.1-r1::gentoo, 1.15-r2::gentoo
sys-devel/binutils:       2.25.1-r1::gentoo
sys-devel/gcc:            5.3.0::gentoo
sys-devel/gcc-config:     1.8-r1::gentoo
sys-devel/libtool:        2.4.6-r2::gentoo
sys-devel/make:           4.1-r1::gentoo
sys-kernel/linux-headers: 4.5::gentoo (virtual/os-headers)
sys-libs/glibc:           2.23-r1::gentoo
Repositories:

gentoo
    location: /usr/portage
    sync-type: rsync
    sync-uri: rsync://rsync.ru.gentoo.org/gentoo-portage
    priority: -1000

angelos
    location: /var/lib/layman/angelos
    sync-type: laymansync
    sync-uri: git://anongit.gentoo.org/dev/angelos.git
    masters: gentoo
    priority: 50

jorgicio
    location: /var/lib/layman/jorgicio
    masters: gentoo
    priority: 50

miramir
    location: /var/lib/layman/miramir
    masters: gentoo
    priority: 50

mva
    location: /var/lib/layman/mva
    masters: gentoo
    priority: 50

obs-studio-overlay
    location: /var/lib/layman/obs-studio-overlay
    masters: gentoo
    priority: 50

rion
    location: /var/lib/layman/rion
    masters: gentoo
    priority: 50

steam-overlay
    location: /var/lib/layman/steam-overlay
    masters: gentoo
    priority: 50

tox-overlay
    location: /var/lib/layman/tox-overlay
    sync-uri: git://github.com/Tox/gentoo-overlay-tox.git
    masters: gentoo
    priority: 50

ACCEPT_KEYWORDS="amd64 ~amd64"
ACCEPT_LICENSE="* -@EULA"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-O2 -pipe -march=native -fomit-frame-pointer"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/lib64/libreoffice/program/sofficerc /usr/share/gnupg/qualified.txt"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php5.5/ext-active/ /etc/php/apache2-php5.6/ext-active/ /etc/php/apache2-php7.0/ext-active/ /etc/php/cgi-php5.5/ext-active/ /etc/php/cgi-php5.6/ext-active/ /etc/php/cgi-php7.0/ext-active/ /etc/php/cli-php5.5/ext-active/ /etc/php/cli-php5.6/ext-active/ /etc/php/cli-php7.0/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo"
CXXFLAGS="-O2 -pipe -march=native -fomit-frame-pointer"
DISTDIR="/usr/portage/distfiles"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-logs cgroup compress-build-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news nodoc parallel-fetch parallel-install preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync"
FFLAGS="-O2 -pipe"
GENTOO_MIRRORS="http://mirror.yandex.ru/gentoo-distfiles/"
LANG="en_US.utf8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j8"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git"
PORTAGE_TMPDIR="/tmp"
USE="X a52 aac acl acpi alsa amd64 avx bash-completion bluetooth branding bzip2 cairo cdda cdr cli consolekit cracklib crypt cups curl curlwrappers cxx dbus dga djvu dri dts dv dvd dvdr emboss encode exif fam fbcon ffmpeg firefox flac fortran gdbm gif git glamor gnutls gpm gtk gzip hddtemp iconv idn imagemagick inotify ipv6 jabber jit jpeg lame lcms ldap libass libnotify lm_sensors lzma lzo mad matroska mhash mime mmap mmx mmxext mng modules mp3 mp4 mpeg mplayer multilib ncurses nls nptl nsplugin ogg openal opengl openmp pam pango pch pcre pdf plasma png policykit posix ppds pulseaudio qt3support qt4 qt5 raw readline samba sasl sdl seccomp session sharedmem smp sockets sound spell sse sse2 sse3 sse4_1 ssl ssse3 startup-notification svg syslog taglib tcmalloc tcpd theora threads tiff truetype udev udisks unicode upnp upnp-av upower usb v4l vhosts videos vnc vorbis wxwidgets x264 x265 xattr xcb xcomposite xft xinerama xml xmpp xv xvid xvmc zlib" ABI_X86="64 32" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="aes avx mmx mmxext popcnt sse sse2 sse3 sse4_1 sse4_2 ssse3" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="evdev joystick" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="en ru" NETBEANS_MODULES="apisupport ergonomics ide identity nb php webcommon websvccommon" NGINX_MODULES_HTTP="access auth_basic autoindex browser cache_purge charset dav empty_gif fancyindex fastcgi gzip headers_more image_filter limit_conn limit_req map memcached proxy referer rewrite spdy upload_progress v2" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-5 php5-6 php7-0" PYTHON_SINGLE_TARGET="python3_4" PYTHON_TARGETS="python2_7 python3_4 python3_5" QEMU_SOFTMMU_TARGETS="x86_64 arm" QEMU_USER_TARGETS="x86_64 arm" RUBY_TARGETS="ruby22 ruby20 ruby23" USERLAND="GNU" VIDEO_CARDS="nvidia" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
USE_PYTHON="2.7"
Unset:  CC, CPPFLAGS, CTARGET, CXX, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS
Comment 1 Berthold Humkamp 2016-04-18 11:07:20 UTC
I've got the same problem since about 4 weeks.

See my attached files.
Comment 2 Berthold Humkamp 2016-04-18 11:13:40 UTC
Created attachment 431100 [details]
build.log
Comment 3 Berthold Humkamp 2016-04-18 11:14:58 UTC
Created attachment 431102 [details]
build-abi_x86_64.amd64.log
Comment 4 Berthold Humkamp 2016-04-18 11:16:04 UTC
Created attachment 431104 [details]
emerge --info ...
Comment 5 Berthold Humkamp 2016-04-18 11:16:32 UTC
Created attachment 431106 [details]
emerge -pqv ...
Comment 6 Berthold Humkamp 2016-04-18 11:19:13 UTC
Created attachment 431108 [details]
build environment
Comment 7 Andrzej Kardas 2016-05-22 11:19:21 UTC
Created attachment 434956 [details, diff]
Patch fixing build issue

Patch taken from: https://jira.mariadb.org/browse/MDEV-9479 fixed problem for me.
Comment 8 Berthold Humkamp 2016-05-23 11:14:38 UTC
Thanks for that patch, but where will I have to put the epatch command into the ebuild?

Inserting the following:


src_prepare(){
        # bug 580324 boost problems
        epatch "${FILESDIR}/${PV}-fix-ftbfs-boost1.60.patch"
}


just in front of src_configure(){...} generates the following error message:


...
>>> Unpacking mysql-extras-20160131-0252Z.tar.bz2 to /var/tmp/portage/dev-db/mariadb-10.1.14/work
>>> Source unpacked in /var/tmp/portage/dev-db/mariadb-10.1.14/work
>>> Preparing source in /var/tmp/portage/dev-db/mariadb-10.1.14/work/mysql ...
 * Applying 10.1.14-fix-ftbfs-boost1.60.patch ...
 [ ok ]
 * ERROR: dev-db/mariadb-10.1.14::timewulf failed (prepare phase):
 *   eapply_user (or default) must be called in src_prepare()!
 * 
 * Call stack:
 *            ebuild.sh, line  780:  Called __ebuild_main 'prepare'
 *   phase-functions.sh, line 1005:  Called __dyn_prepare
 *   phase-functions.sh, line  380:  Called die
 * The specific snippet of code:
 *   		die "eapply_user (or default) must be called in src_prepare()!"
 * 
...
Comment 9 Brian Evans (RETIRED) gentoo-dev 2016-05-23 12:26:16 UTC
*** Bug 583356 has been marked as a duplicate of this bug. ***
Comment 10 Brian Evans (RETIRED) gentoo-dev 2016-05-23 12:28:18 UTC
(In reply to Berthold Humkamp from comment #8)
> Thanks for that patch, but where will I have to put the epatch command into
> the ebuild?
> 
> Inserting the following:
> 
> 
> src_prepare(){
>         # bug 580324 boost problems
>         epatch "${FILESDIR}/${PV}-fix-ftbfs-boost1.60.patch"
> }
> 
> 

Don't add naive functions to the ebuild.  To apply such a patch, follow https://wiki.gentoo.org/wiki//etc/portage/patches#Adding_user_patches
Comment 11 Berthold Humkamp 2016-05-24 07:38:01 UTC
Thanks, the patch is applied now, but I get another error later in the code.

I'm trying to understand and leave a message a bit later.
Comment 12 Berthold Humkamp 2016-05-27 04:43:27 UTC
Sorry, I used some time, but I couldn't find something useful for me: The build logs are attached.
Comment 13 Berthold Humkamp 2016-05-27 04:46:51 UTC
Created attachment 435516 [details]
build.log
Comment 14 Berthold Humkamp 2016-05-27 04:47:33 UTC
Created attachment 435518 [details]
build-abi_x86_64.amd64.log
Comment 15 Attila Tóth 2016-06-08 17:47:21 UTC
(In reply to Andrzej Kardas from comment #7)
> Created attachment 434956 [details, diff] [details, diff]
> Patch fixing build issue
> 
> Patch taken from: https://jira.mariadb.org/browse/MDEV-9479 fixed problem
> for me.

Thanks! Also works for me.