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Bug 580294 - dev-lang/julia-0.4.3: julia ... sysimg.jl: signal (11): Segmentation fault through dlopen
Summary: dev-lang/julia-0.4.3: julia ... sysimg.jl: signal (11): Segmentation fault th...
Status: RESOLVED TEST-REQUEST
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: [OLD] Unspecified (show other bugs)
Hardware: AMD64 Linux
: Normal normal (vote)
Assignee: Patrick Lauer
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2016-04-17 08:30 UTC by Luis Ferreira
Modified: 2016-09-09 18:44 UTC (History)
1 user (show)

See Also:
Package list:
Runtime testing required: ---


Attachments
dev-lang:julia-0.4.3:20160417-081334.log (file_580294.txt,202.57 KB, text/plain)
2016-04-17 08:34 UTC, Luis Ferreira
Details
/var/tmp/portage/dev-lang/julia-0.4.3/temp/environment (file_580294.txt,92.58 KB, text/plain)
2016-04-17 08:36 UTC, Luis Ferreira
Details
ERROR: dev-lang/julia-0.4.6::gentoo failed (compile phase) (file_580294.txt,206.45 KB, text/plain)
2016-09-09 18:44 UTC, Luis Ferreira
Details

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Description Luis Ferreira 2016-04-17 08:30:55 UTC
*** This error is usually fixed by running `make clean`. If the error persists, try `make cleanall`. ***
Makefile:200: recipe for target '/var/tmp/portage/dev-lang/julia-0.4.3/work/julia-0.4.3/usr/lib/julia/sys.o' failed
make[1]: *** [/var/tmp/portage/dev-lang/julia-0.4.3/work/julia-0.4.3/usr/lib/julia/sys.o] Error 1
make[1]: Leaving directory '/var/tmp/portage/dev-lang/julia-0.4.3/work/julia-0.4.3'
Makefile:69: recipe for target 'julia-sysimg-release' failed
make: *** [julia-sysimg-release] Error 2


Reproducible: Always




emerge --info '=dev-lang/julia-0.4.3::gentoo'
Portage 2.2.26 (python 3.4.3-final-0, default/linux/amd64/13.0/no-multilib, gcc-4.9.3, glibc-2.22-r4, 4.0.5-gentoo x86_64)
=================================================================
                         System Settings
=================================================================
System uname: Linux-4.0.5-gentoo-x86_64-Intel-R-_Core-TM-_i7_CPU_860_@_2.80GHz-with-gentoo-2.2
KiB Mem:     6072048 total,    878684 free
KiB Swap:    6144824 total,   6144552 free
Timestamp of repository gentoo: Sun, 17 Apr 2016 07:15:01 +0000
sh bash 4.3_p42-r1
ld GNU ld (Gentoo 2.25.1 p1.1) 2.25.1
app-shells/bash:          4.3_p42-r1::gentoo
dev-java/java-config:     2.2.0-r3::gentoo
dev-lang/perl:            5.20.2::gentoo
dev-lang/python:          2.7.10-r1::gentoo, 3.3.5-r2::gentoo, 3.4.3-r1::gentoo
dev-util/cmake:           3.3.1-r1::gentoo
dev-util/pkgconfig:       0.28-r2::gentoo
sys-apps/baselayout:      2.2::gentoo
sys-apps/openrc:          0.19.1::gentoo
sys-apps/sandbox:         2.10-r1::gentoo
sys-devel/autoconf:       2.13::gentoo, 2.69::gentoo
sys-devel/automake:       1.4_p6-r2::gentoo, 1.7.9-r3::gentoo, 1.8.5-r5::gentoo, 1.9.6-r4::gentoo, 1.10.3-r1::gentoo, 1.11.6-r1::gentoo, 1.12.6::gentoo, 1.13.4::gentoo, 1.14.1::gentoo, 1.15::gentoo
sys-devel/binutils:       2.25.1-r1::gentoo
sys-devel/gcc:            4.8.5::gentoo, 4.9.3::gentoo
sys-devel/gcc-config:     1.7.3::gentoo                                                                                                                                                                                                                                        
sys-devel/libtool:        2.4.6::gentoo                                                                                                                                                                                                                                        
sys-devel/make:           4.1-r1::gentoo                                                                                                                                                                                                                                       
sys-kernel/linux-headers: 4.3::gentoo (virtual/os-headers)                                                                                                                                                                                                                     
sys-libs/glibc:           2.22-r4::gentoo                                                                                                                                                                                                                                      
Repositories:                                                                                                                                                                                                                                                                  
                                                                                                                                                                                                                                                                               
gentoo                                                                                                                                                                                                                                                                         
    location: /usr/portage                                                                                                                                                                                                                                                     
    sync-type: rsync                                                                                                                                                                                                                                                           
    sync-uri: rsync://rsync.europe.gentoo.org/gentoo-portage                                                                                                                                                                                                                   
    priority: -1000                                                                                                                                                                                                                                                            
                                                                                                                                                                                                                                                                               
g-ctan                                                                                                                                                                                                                                                                         
    location: /usr/local/portage                                                                                                                                                                                                                                               
    masters: gentoo                                                                                                                                                                                                                                                            
    priority: 0                                                                                                                                                                                                                                                                
                                                                                                                                                                                                                                                                               
House                                                                                                                                                                                                                                                                          
    location: /var/lib/layman                                                                                                                                                                                                                                                  
    masters: gentoo                                                                                                                                                                                                                                                            
    priority: 1                                                                                                                                                                                                                                                                
                                                                                                                                                                                                                                                                               
ACCEPT_KEYWORDS="amd64"                                                                                                                                                                                                                                                        
ACCEPT_LICENSE="*"                                                                                                                                                                                                                                                             
CBUILD="x86_64-pc-linux-gnu"                                                                                                                                                                                                                                                   
CFLAGS="-march=native -O2 -pipe"                                                                                                                                                                                                                                               
CHOST="x86_64-pc-linux-gnu"                                                                                                                                                                                                                                                    
CONFIG_PROTECT="/etc /usr/lib64/libreoffice/program/sofficerc /usr/share/config /usr/share/easy-rsa /usr/share/gnupg/qualified.txt /var/lib/hsqldb"                                                                                                                            
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php5.5/ext-active/ /etc/php/apache2-php5.6/ext-active/ /etc/php/cgi-php5.5/ext-active/ /etc/php/cgi-php5.6/ext-active/ /etc/php/cli-php5.5/ext-active/ /etc/php/cli-php5.6/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c"
CXXFLAGS="-march=native -O2 -pipe"
DISTDIR="/usr/portage/distfiles"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-O2 -pipe"
GENTOO_MIRRORS="http://cesium.di.uminho.pt/pub/gentoo/ http://ftp.dei.uc.pt/pub/linux/gentoo/ ftp://gentoo.imj.fr/pub/gentoo/ http://130.59.10.35/ftp/mirror/gentoo/ "
LANG="pt_PT.UTF-8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j9 -l8"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
USE="R X a52 aac aacplus aalib acl acoustid acpi action_modeswitch addressbook adns adplug aften akonadi alsa amd64 amr amrenc analitza apbs apng archive ares arpack aspell ass atmo attica audiofile autoipd autotrace avahi avcodec avformat avx bash-completion berkdb binfilter bluetooth boost bs2b bzip2 cairo cdda cddax cddb cdio celt cleartype cli clucene collada consolekit context corefonts cover cpudetection cracklib crypt csharp cue cups curl cxx dap dbi dbus dc1394 declarative demosaic designer-plugin detex device-mapper dirac djvu double-precision dpi dri dts dv dvd dvdnav dvi2tty dvipdfm ebook egl eigen embedded enca encode epspdf equalizer exif expat expoblending extra faac faad facedetect fam fame fbosd fdk ffmpeg fftw fits flac flash flite fluidsynth fontconfig fortran fortran2003 fortran95 fpx frei0r fribidi ftdi ftp fuse g3dvl games gcj gd gdbm geoip geolocation geos gflags gfortran gif gimp gltf gmath gme gml gmxmopac7 gnuplot gnutls gpac gphoto2 gps graphics graphite graphviz grass growl gsl gstreamer gtk gudev guile hdf5 hdri hidpi hpcups http-conduit humanities hunspell hwdb ical iconv icu id3tag idn iec61883 ieee1394 imagemagick import-filter indi infinality inkjar inotify int64 introspection ipod ipv6 jack jadetex java javascript jbig jemalloc jpeg jpeg2k kate kde keymap kig-scripting kipi kpathsea ladspa lame lapack lash lastfm latex latex3 lcms ldap lensfun libass libcaca libnl libnotify libsamplerate libsoxr libssh2 libsysfs libtar libtiger libv4l libv4l2 libvisual live lm_sensors lorcon lqr lua luatex lyrics lzma lzo mad marble matroska mdnsresponder-compat melt metapost metis midi minizip mjpeg mms mmx mmxext mng mobi modplug modules mopac7 motif mp3 mp3tunes mp4 mpeg mpg123 mpi mplayer mpqc mpris mtp musepack music musicbrainz mysql nas ncurses netcdf network networking nlpsolver nls nptl nsplugin nss numpy nut nuv ocr octave odbc ogdi ogg okular omega omxil opal openal openbabel opencl openexr opengl openipmi openmp opus pam pango panorama passwordsave pcre pdf pdfannotextractor pdfimport perl pgf phonon plasma player plotutils png policykit popcnt portaudio postproc postscript ppds projectm protobuf pstricks publishers pulseaudio pvr python q32 q64 qalculate qimageblitz qt3support qt4 quad quicktime quvi rar raw readline real realtime redeyes romio rpc rtc rtf rtmp rtsp ruby rups sasl scale0tilt scanner schroedinger science scrobbler sdl sdl-image seccomp semantic-desktop session sftp shaders shapefile shine shout sid sift skins smi smime smp sms smtp sndfile snmp soundtouch sox spatialite speex spell sql sqlite sse sse2 sse3 sse4 sse4.1 sse4.2 sse4_1 sse4_2 ssl ssse3 stats subtitles subversion svg swig switcher symlink szip taglib tbb tcpd tellico tesseract tex4ht texi2html tga theora thin-splines threads thumbnail tidy tiff timezone tk toolame tordns truetype twolame type3 udev unicode unwind upnp usb v4l v4l2 vaapi vamp vc vcdinfo vcdx vdpau vf-dlopen video videoslideshow vkontakte vlm vmd vmware-tools vmware_guest_linux vmware_guest_windows vorbis vpx wavpack webkit webp wma wma-fixed wmf wxwidgets x264 x265 xanim xattr xcomposite xetex xindy xine xml xmp xosd xpm xvid xvmc yaz zeroconf zip zlib zvbi" ABI_X86="64" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="sony_dscf55" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="mmx mmxext popcnt sse sse2 sse3 sse4_1 sse4_2 ssse3" CURL_SSL="openssl" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="evdev wacom keyboard mouse" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="pt en" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-5 php5-2" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_4" USERLAND="GNU" VIDEO_CARDS="vesa nouveau" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
USE_PYTHON="2.7 3.4"
Unset:  CC, CPPFLAGS, CTARGET, CXX, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS
Comment 1 Luis Ferreira 2016-04-17 08:34:15 UTC
Created attachment 430906 [details]
dev-lang:julia-0.4.3:20160417-081334.log
Comment 2 Luis Ferreira 2016-04-17 08:36:06 UTC
Created attachment 430910 [details]
/var/tmp/portage/dev-lang/julia-0.4.3/temp/environment
Comment 3 Matthias Maier gentoo-dev 2016-09-09 05:49:57 UTC
Please test again with version 0.4.6 and reopen if problem still exists.


commit b620c2db81b11d3e63069512fbcc855b53cfb26a
Author: Matthias Maier <tamiko@gentoo.org>
Date:   Fri Sep 9 00:45:35 2016 -0500

    dev-lang/julia: version bump to 0.4.6
    
    Package-Manager: portage-2.2.28
Comment 4 Luis Ferreira 2016-09-09 18:44:35 UTC
Created attachment 445320 [details]
ERROR: dev-lang/julia-0.4.6::gentoo failed (compile phase)