Created attachment 426810 [details] build.log sci-geosciences/mapnik-2.2.0 fails to build with dev-util/scons[python_targets_pypy]: ``` scons: Configure: Checking for C library z... .sconf_temp/conftest_2.c <- | | |#include "zlib.h" | |int |main() { | |return 0; |} | scons: Configure: Caught exception while building ".sconf_temp/conftest_2": Traceback (most recent call last): File "/usr/lib64/pypy/site-packages/SCons/Job.py", line 199, in start task.prepare() File "/usr/lib64/pypy/site-packages/SCons/Taskmaster.py", line 172, in prepare self.exception_raise() File "/usr/lib64/pypy/site-packages/SCons/Taskmaster.py", line 951, in next_task task.make_ready() File "/usr/lib64/pypy/site-packages/SCons/Taskmaster.py", line 402, in make_ready_current t.disambiguate().make_ready() File "/usr/lib64/pypy/site-packages/SCons/Node/FS.py", line 3089, in make_ready self.get_binfo() File "/usr/lib64/pypy/site-packages/SCons/Node/__init__.py", line 1102, in get_binfo binfo.bactsig = SCons.Util.MD5signature(executor.get_contents()) File "/usr/lib64/pypy/site-packages/SCons/Executor.py", line 462, in get_contents for action in self.get_action_list()]) File "/usr/lib64/pypy/site-packages/SCons/Action.py", line 434, in get_contents result = [ self.get_presig(target, source, env) ] File "/usr/lib64/pypy/site-packages/SCons/Action.py", line 979, in get_presig return c.get_presig(self, target, source, env) File "/usr/lib64/pypy/site-packages/SCons/Action.py", line 831, in get_presig return env.subst_target_source(cmd, SUBST_SIG, target, source) File "/usr/lib64/pypy/site-packages/SCons/Environment.py", line 514, in subst return SCons.Subst.scons_subst(string, self, raw, target, source, gvars, lvars, conv) File "/usr/lib64/pypy/site-packages/SCons/Subst.py", line 559, in scons_subst result = ss.substitute(strSubst, lvars) File "/usr/lib64/pypy/site-packages/SCons/Subst.py", line 523, in substitute result.append(self.conv(self.expand(a, lvars))) File "/usr/lib64/pypy/site-packages/SCons/Subst.py", line 478, in expand return self.substitute(s, lv) File "/usr/lib64/pypy/site-packages/SCons/Subst.py", line 523, in substitute result.append(self.conv(self.expand(a, lvars))) File "/usr/lib64/pypy/site-packages/SCons/Subst.py", line 478, in expand return self.substitute(s, lv) File "/usr/lib64/pypy/site-packages/SCons/Subst.py", line 530, in substitute return self.expand(args, lvars) File "/usr/lib64/pypy/site-packages/SCons/Subst.py", line 482, in expand return list(map(func, s)) File "<builtin>/2.7/_abcoll.py", line 602, in __iter__ File "/usr/lib64/pypy/site-packages/SCons/Subst.py", line 219, in __getitem__ nl = self.nl._create_nodelist() File "/usr/lib64/pypy/site-packages/SCons/Subst.py", line 197, in _gen_nodelist self.nodelist = SCons.Util.NodeList(list(map(self.func, mylist))) File "/usr/lib64/pypy/site-packages/SCons/Subst.py", line 310, in get_src_subst_proxy node = rfile() File "/usr/lib64/pypy/site-packages/SCons/Node/FS.py", line 1025, in rfile self.__class__ = File TypeError: __class__ assignment: 'Entry' object layout differs from 'File' scons: Configure: no ``` ``` # sudo emerge --info dev-util/scons sci-geosciences/mapnik Passwort: Portage 2.2.26 (python 2.7.10-final-42, default/linux/amd64/13.0/desktop/plasma/systemd, gcc-5.3.0, glibc-2.22-r2, 4.4.2-gentoo x86_64) ================================================================= System Settings ================================================================= System uname: Linux-4.4.2-gentoo-x86_64-AMD_A10-7800_Radeon_R7,_12_Compute_Cores_4C+8G-with-gentoo-2.2 KiB Mem: 15381240 total, 2081312 free KiB Swap: 0 total, 0 free Timestamp of repository gentoo: Sat, 27 Feb 2016 20:15:01 +0000 sh bash 4.3_p42-r2 ld GNU ld (Gentoo 2.25 p1.2) 2.25 ccache version 3.2.4 [disabled] app-shells/bash: 4.3_p42-r2::gentoo dev-java/java-config: 2.2.0-r3::gentoo dev-lang/perl: 5.22.1::gentoo dev-lang/python: 2.7.11-r2::gentoo, 3.4.3-r7::gentoo, 3.5.1-r2::gentoo dev-util/ccache: 3.2.4::gentoo dev-util/cmake: 3.4.3::gentoo dev-util/pkgconfig: 0.29::gentoo sys-apps/baselayout: 2.2::gentoo sys-apps/sandbox: 2.10-r1::gentoo sys-devel/autoconf: 2.13::gentoo, 2.69-r1::gentoo sys-devel/automake: 1.11.6-r2::gentoo, 1.12.6-r1::gentoo, 1.13.4-r1::gentoo, 1.14.1-r1::gentoo, 1.15-r2::gentoo sys-devel/binutils: 2.25-r1::gentoo sys-devel/gcc: 5.3.0::gentoo sys-devel/gcc-config: 1.8-r1::gentoo sys-devel/libtool: 2.4.6-r2::gentoo sys-devel/make: 4.1-r1::gentoo sys-kernel/linux-headers: 4.4::gentoo (virtual/os-headers) sys-libs/glibc: 2.22-r2::gentoo Repositories: gentoo location: /var/cache/portage/gentoo sync-type: rsync sync-uri: rsync://rsync.de.gentoo.org/gentoo-portage priority: -1000 aegypius location: /var/lib/layman/aegypius sync-type: laymansync sync-uri: git://github.com/aegypius/overlay.git masters: gentoo priority: 50 java location: /var/lib/layman/java sync-type: laymansync sync-uri: git://anongit.gentoo.org/proj/java.git masters: gentoo priority: 50 kde location: /var/lib/layman/kde sync-type: laymansync sync-uri: git://anongit.gentoo.org/proj/kde.git masters: gentoo priority: 50 rust location: /var/lib/layman/rust sync-type: laymansync sync-uri: git://github.com/gentoo/gentoo-rust.git masters: gentoo priority: 50 sage-on-gentoo location: /var/lib/layman/sage-on-gentoo sync-type: laymansync sync-uri: git://github.com/cschwan/sage-on-gentoo.git masters: gentoo science priority: 50 science location: /var/lib/layman/science sync-type: laymansync sync-uri: git://anongit.gentoo.org/proj/sci.git masters: gentoo priority: 50 local location: /var/cache/portage/local masters: gentoo science priority: 100 ACCEPT_KEYWORDS="amd64 ~amd64" ACCEPT_LICENSE="* -@EULA" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-pipe -O2 -march=bdver3" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/lib64/libreoffice/program/sofficerc /usr/share/config /usr/share/gnupg/qualified.txt /var/lib/hsqldb" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php7.0/ext-active/ /etc/php/cgi-php7.0/ext-active/ /etc/php/cli-php7.0/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c" CXXFLAGS="-pipe -O2 -march=bdver3" DISTDIR="/var/cache/portage/distfiles" EMERGE_DEFAULT_OPTS="--keep-going --nospinner" FCFLAGS="-O2 -pipe" FEATURES="assume-digests binpkg-logs buildsyspkg compressdebug config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch parallel-install preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr" FFLAGS="-O2 -pipe" GENTOO_MIRRORS="http://ftp.spline.inf.fu-berlin.de/mirrors/gentoo/ http://ftp-stud.hs-esslingen.de/pub/Mirrors/gentoo/ http://distfiles.gentoo.org" LANG="en_GB.UTF-8" LDFLAGS="-Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu" MAKEOPTS="-j3" PKGDIR="/var/cache/portage/packages" PORTAGE_COMPRESS="xz" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git" PORTAGE_TMPDIR="/var/tmp" USE="X a52 aac aacplus aacs acl acpi alsa amd64 appindicator archive audit avahi bash-completion bdplus berkdb bluetooth bluray branding bzip2 cairo caps cdda cddb cdio cdr celt cjk cli colord conntrack cracklib crypt cups cxx dbus declarative dirac dri dts dvb dvd dvdr egl emboss encode exif fam fax ffmpeg firefox flac fontconfig fortran fribidi gdbm geoclue geolocation gif glamor gles gmp gpm gstreamer gtk harfbuzz ibus iconv ipv6 jpeg jpeg2k kde kipi ladspa latex lcms ldap libinput libnotify libproxy libsecret lua_target_lua5-2 lv2 lz4 lzma lzo mad mmx mmxext mng modemmanager modplug modules mp3 mp4 mpeg mplayer mtp multilib multitarget mysql ncurses netlink networkmanager nls nptl ogg openal opencl openexr opengl openmax openmp opus pam pango pcap pch pcre pdf phonon plasma png policykit ppds pulseaudio qml qt3support qt4 qt5 readline rtmp samba scanner schroedinger sctp sdl seccomp semantic-desktop session speex spell sse sse2 ssl startup-notification subversion svg systemd tcpd theora threads tiff truetype udev udisks unicode upnp upnp-av upower usb v4l v4l2 vaapi vdpau vorbis vpx wavpack wayland webp widgets x264 x265 xattr xcb xcomposite xinerama xml xrandr xscreensaver xv xvid xz zeroconf zlib" ABI_X86="64" ALSA_CARDS="hda-intel" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="stage words flow sheets gemini" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="3dnow 3dnowext mmx mmxext sse sse2 sse3 ssse3 sse4 sse4a sse4_1 sse4_2" DRACUT_MODULES="btrfs caps systemd" ELIBC="glibc" ENLIGHTENMENT_MODULES="*" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox ubx" GRUB_PLATFORMS="coreboot efi-64 pc" INPUT_DEVICES="joystick" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="de en en_GB ar fa tr" LIRC_DEVICES="devinput" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-5" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_4 pypy pypy3" RUBY_TARGETS="ruby20 ruby21" USERLAND="GNU" VIDEO_CARDS="amdgpu radeon radeonsi" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" Unset: CC, CPPFLAGS, CTARGET, CXX, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON ================================================================= Package Settings ================================================================= dev-util/scons-2.4.1::gentoo was built with the following: USE="-doc" ABI_X86="64" PYTHON_TARGETS="pypy python2_7" sci-geosciences/mapnik-2.2.0::gentoo was built with the following: USE="cairo -debug -doc -gdal -postgres -python -sqlite" ABI_X86="64" PYTHON_SINGLE_TARGET="python2_7 -python3_3" PYTHON_TARGETS="python2_7 -python3_3" ```
Created attachment 426812 [details] config.log ``` # emerge --info dev-python/pypy [...] dev-python/pypy-4.0.1::gentoo was built with the following: USE="bzip2 gdbm jit ncurses shadowstack sqlite -doc -low-memory (-sandbox) -test -tk" ABI_X86="64" CPU_FLAGS_X86="-sse2" ``` ``` # eselect python list Available Python interpreters, in order of preference: [1] pypy [2] python3.4 [3] python3.5 (fallback) [4] python2.7 (fallback) [5] pypy3 (fallback) ```
Please give the version bump a try and report back, thanks. commit 4854a76b43c2c6c4c265f0d3b7c3bb477965cf34 Author: David Seifert <soap@gentoo.org> Date: Sun Apr 10 01:12:15 2016 +0200 sci-geosciences/mapnik: Version bump Gentoo-Bug: 554892 * EAPI=6
I was able to build sci-geosciences/mapnik-3.0.9 without any error.
Which however don't solve this bug as long as broken version is in tree. Amy
commit a94942edfc3ea1643d42017deb8ae9c591e767c2 Author: Sam Jorna <wraeth@gentoo.org> Date: Sun Apr 10 21:54:10 2016 +1000 sci-geosciences/mapnik: remove old Remove old versions and related patches. Gentoo-bug: 575858 Gentoo-bug: 578924 Package-Manager: portage-2.2.28
