Trying run freemind after emerging fails with this error "java_config_2.Errors.UnexistingPackageError: Package jython was not found! Couldn't get needed information" Reproducible: Always Steps to Reproduce: 1. emerge jython (required since freemind is lacking jython as dependency) 2. emerge freemind 3. run freeming Actual Results: ~ > freemind Traceback (most recent call last): File "/usr/lib/python-exec/python2.7/gjl", line 121, in <module> args = get_args(pkg) File "/usr/lib/python-exec/python2.7/gjl", line 38, in get_args classpath, library = get_pkg_args(pkg) File "/usr/lib/python-exec/python2.7/gjl", line 19, in get_pkg_args classpath = manager.build_dep_path([package.name()], "CLASSPATH", missing_deps) File "/usr/lib64/python2.7/site-packages/java_config_2/EnvironmentManager.py", line 354, in build_dep_path p = self.get_package(dep[-1]) File "/usr/lib64/python2.7/site-packages/java_config_2/EnvironmentManager.py", line 154, in get_package return self.load_package(pkgname) File "/usr/lib64/python2.7/site-packages/java_config_2/EnvironmentManager.py", line 83, in load_package raise UnexistingPackageError(name) java_config_2.Errors.UnexistingPackageError: Package jython was not found! Couldn't get needed information Expected Results: Runs EBuild versions: dev-java/jython-2.7.0:2.7::gentoo USE="readline -doc -examples -source {-test}" app-misc/freemind-1.0.1-r2::gentoo USE="pdf svg -doc -groovy -latex" java version "1.7.0_75" OpenJDK Runtime Environment (IcedTea 2.5.4) (Gentoo package icedtea-7.2.5.4) OpenJDK 64-Bit Server VM (build 24.75-b04, mixed mode) Available Python interpreters: [1] python2.7 * [2] python3.4
I can confirm exactly this error since update from dev-java/jython-2.2.1-r2 to dev-java/jython-2.7.0. -------------------------------------------------- emerge --info jython freemind Portage 2.2.26 (python 2.7.10-final-0, default/linux/amd64/13.0/desktop, gcc-4.9.3, glibc-2.21-r1, 4.1.15-gentoo-r1 x86_64) ================================================================= System Settings ================================================================= System uname: Linux-4.1.15-gentoo-r1-x86_64-Intel-R-_Core-TM-2_Quad_CPU_Q8200_@_2.33GHz-with-gentoo-2.2 KiB Mem: 4046508 total, 1280320 free KiB Swap: 4192960 total, 4192960 free Timestamp of repository gentoo: Fri, 12 Feb 2016 12:15:01 +0000 sh dash 0.5.8.2 ld GNU ld (Gentoo 2.25.1 p1.1) 2.25.1 app-shells/bash: 4.3_p42-r1::gentoo dev-java/java-config: 2.2.0::gentoo dev-lang/perl: 5.20.2::gentoo dev-lang/python: 2.7.10-r1::gentoo, 3.4.3-r1::gentoo dev-util/cmake: 3.3.1-r1::gentoo dev-util/pkgconfig: 0.28-r2::gentoo sys-apps/baselayout: 2.2::gentoo sys-apps/openrc: 0.19.1::gentoo sys-apps/sandbox: 2.10-r1::gentoo sys-devel/autoconf: 2.13::gentoo, 2.69::gentoo sys-devel/automake: 1.10.3-r1::gentoo, 1.11.6-r1::gentoo, 1.14.1::gentoo, 1.15::gentoo sys-devel/binutils: 2.25.1-r1::gentoo sys-devel/gcc: 4.9.3::gentoo sys-devel/gcc-config: 1.7.3::gentoo sys-devel/libtool: 2.4.6::gentoo sys-devel/make: 4.1-r1::gentoo sys-kernel/linux-headers: 4.3::gentoo (virtual/os-headers) sys-libs/glibc: 2.21-r1::gentoo Repositories: gentoo location: /usr/portage sync-type: rsync sync-uri: rsync://rsync.de.gentoo.org/gentoo-portage priority: -1000 science location: /var/lib/layman/science masters: gentoo priority: 0 ACCEPT_KEYWORDS="amd64" ACCEPT_LICENSE="* -@EULA AdobeFlash-11.x" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-march=native -O2 -pipe" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/lib/latex2html /usr/lib64/libreoffice/program/sofficerc /usr/share/gnupg/qualified.txt /usr/share/texmf-site/tex/latex/html /var/lib/hsqldb" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php5.6/ext-active/ /etc/php/cgi-php5.6/ext-active/ /etc/php/cli-php5.6/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c" CXXFLAGS="-march=native -O2 -pipe" DISTDIR="/usr/portage/distfiles" EMERGE_DEFAULT_OPTS=" -j4 --load-average 5" FCFLAGS="-O2 -pipe" FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr" FFLAGS="-O2 -pipe" GENTOO_MIRRORS="http://mirror.leaseweb.com/gentoo/ http://ftp.snt.utwente.nl/pub/os/linux/gentoo http://de-mirror.org/gentoo/ http://ftp-stud.hs-esslingen.de/pub/Mirrors/gentoo/ http://mirror.netcologne.de/gentoo/" LANG="de_DE@euro" LC_ALL="de_DE.UTF-8" LDFLAGS="-Wl,-O1 -Wl,--as-needed" MAKEOPTS="-j4" PKGDIR="/usr/portage/packages" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages" PORTAGE_TMPDIR="/var/tmp" USE="X a52 aac acl acpi alsa amd64 amr apache2 avahi berkdb branding bzip2 cairo cdda cdr cli consolekit cracklib crypt cups cupsddk cxx dbus doc dri dts dvd dvdr dvi emboss encode exif fam firefox flac fortran g3dvl gd gdbm gif gimp glamor gnutls gpm gstreamer gtk gtk3 hddtemp hpcups hunspell iconv icu ipv6 java jpeg jpg latex lcdfilter lcms libnotify lm_sensors lyx mad midi mime mmx mmxext mng modules mono mp3 mp4 mpeg mtp multilib ncurses nls nptl nsplugin nvidia odbc odf ogg opencl opengl openmp pam pango pcre pdf png policykit ppds python qt3support qt5 quicktime raw readline scanner sdl seccomp session smp snmp spell sse sse2 ssl startup-notification svg symlink system-cairo system-icu system-jpeg system-libvpx system-sqlite tcpd theora thunar thunderbird tiff truetype udev udisks unicode upower usb uvm vorbis win32codecs wmf wxwidgets x264 xattr xcb xinerama xml xpm xscreensaver xv xvid xvmc zip zlib zsh-completion" ABI_X86="64" ALSA_CARDS="hda-intel" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="mmx mmxext sse sse2 sse3 sse4_1 ssse3" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="de en" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-5" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_4" RUBY_TARGETS="ruby20 ruby21" SANE_BACKENDS="hp" USERLAND="GNU" VIDEO_CARDS="nvidia" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" Unset: CC, CPPFLAGS, CTARGET, CXX, INSTALL_MASK, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON ================================================================= Package Settings ================================================================= dev-java/jython-2.7.0::gentoo was built with the following: USE="doc readline -examples -source -test" ABI_X86="64" CFLAGS="-march=native -O2 -pipe -fno-stack-protector" CXXFLAGS="-march=native -O2 -pipe -fno-stack-protector" app-misc/freemind-1.0.1-r2::gentoo was built with the following: USE="doc latex pdf svg -groovy" ABI_X86="64"
Please include dev-java/jython-2.2.1-r2 again to portage to get running freemind until this bug is fixed.
(In reply to Kai Wüstermann from comment #2) > Please include dev-java/jython-2.2.1-r2 again to portage to get running > freemind until this bug is fixed. We're going to work out a solution. Sorry but we can't add jython-2.2 back. We've had to remove those versions due to security issues. See bug 552452 and http://nvd.nist.gov/nvd.cfm?cvename=CVE-2013-2027.
Any news on this matter? It's really a big problem since FreeMind is used in our project and we have to constantly tap-dance around this issue with GenToo users. Why does it take so long to figure out a solution? Can't you dyke out jython temporarily?
USE="-pdf -svg" emerge app-misc/freemind will get freemind working (without that features).
Thanks. That's fine for the moment. Not a vital feature.
I confirm, this bug also affects me. Freemind ist not working anymore.
This Bug also affect me. The status should change. > freemind test.mm Traceback (most recent call last): File "/usr/lib/python-exec/python2.7/gjl", line 121, in <module> args = get_args(pkg) File "/usr/lib/python-exec/python2.7/gjl", line 38, in get_args classpath, library = get_pkg_args(pkg) File "/usr/lib/python-exec/python2.7/gjl", line 19, in get_pkg_args classpath = manager.build_dep_path([package.name()], "CLASSPATH", missing_deps) File "/usr/lib64/python2.7/site-packages/java_config_2/EnvironmentManager.py", line 354, in build_dep_path p = self.get_package(dep[-1]) File "/usr/lib64/python2.7/site-packages/java_config_2/EnvironmentManager.py", line 154, in get_package return self.load_package(pkgname) File "/usr/lib64/python2.7/site-packages/java_config_2/EnvironmentManager.py", line 83, in load_package raise UnexistingPackageError(name) java_config_2.Errors.UnexistingPackageError: Package jython was not found! Couldn't get needed information I tested without pdf and svg feature and it is working but I miss the pdf feature. Did you already understood which is the problem?
Same problem here emerging lightzone from an local overlay: EMERGE --INFO: Portage 2.2.28 (python 3.4.3-final-0, default/linux/amd64/13.0/desktop/plasma/systemd, gcc-4.9.3, glibc-2.22-r4, 4.4.6-gentooy x86_64) ================================================================= System uname: Linux-4.4.6-gentooy-x86_64-AMD_Phenom-tm-_II_X4_945_Processor-with-gentoo-2.2 KiB Mem: 16434132 total, 3687168 free KiB Swap: 17414456 total, 17413340 free Timestamp of repository gentoo: Fri, 14 Oct 2016 17:45:01 +0000 sh bash 4.3_p42-r1 ld GNU ld (Gentoo 2.25.1 p1.1) 2.25.1 ccache version 3.2.4 [enabled] app-shells/bash: 4.3_p42-r1::gentoo dev-java/java-config: 2.2.0-r3::gentoo dev-lang/perl: 5.22.2::gentoo dev-lang/python: 2.7.10-r1::gentoo, 3.3.5-r3::gentoo, 3.4.3-r1::gentoo dev-util/ccache: 3.2.4::gentoo dev-util/cmake: 3.5.2-r1::gentoo dev-util/pkgconfig: 0.28-r2::gentoo sys-apps/baselayout: 2.2::gentoo sys-apps/openrc: 0.21.7::gentoo sys-apps/sandbox: 2.10-r1::gentoo sys-devel/autoconf: 2.13::gentoo, 2.69::gentoo sys-devel/automake: 1.10.3-r2::gentoo, 1.11.6-r2::gentoo, 1.12.6-r1::gentoo, 1.14.1-r1::gentoo, 1.15-r2::gentoo sys-devel/binutils: 2.25.1-r1::gentoo sys-devel/gcc: 4.9.3::gentoo sys-devel/gcc-config: 1.7.3::gentoo sys-devel/libtool: 2.4.6::gentoo sys-devel/make: 4.1-r1::gentoo sys-kernel/linux-headers: 4.7::gentoo (virtual/os-headers) sys-libs/glibc: 2.22-r4::gentoo Repositories: gentoo location: /var/lib/layman/gentoo sync-type: rsync sync-uri: rsync://rsync.de.gentoo.org/gentoo-portage priority: 0 xmw location: /var/lib/layman/xmw masters: gentoo priority: 1 betagarden location: /var/lib/layman/betagarden masters: gentoo priority: 2 kde location: /var/lib/layman/kde masters: gentoo priority: 3 qt location: /var/lib/layman/qt masters: gentoo priority: 4 meine_ebuilds location: /usr/local/portage masters: gentoo priority: 6 ACCEPT_KEYWORDS="amd64" ACCEPT_LICENSE="* -@EULA" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-march=native -O2 -pipe -ggdb" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/lib64/fax /usr/lib64/libreoffice/program/sofficerc /usr/share/config /usr/share/gnupg/qualified.txt /var/lib/hsqldb /var/spool/fax/etc" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php5.6/ext-active/ /etc/php/cgi-php5.6/ext-active/ /etc/php/cli-php5.6/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c" CXXFLAGS="-march=native -O2 -pipe -ggdb" DISTDIR="/usr/portage/distfiles" FCFLAGS="-O2 -pipe" FEATURES="assume-digests binpkg-logs ccache config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch preserve-libs protect-owned sandbox sfperms splitdebug strict unknown-features-warn unmerge-logs unmerge-orphans userpriv usersandbox usersync xattr" FFLAGS="-O2 -pipe" GENTOO_MIRRORS="rsync://de-mirror.org/gentoo/ http://de-mirror.org/gentoo/ ftp://de-mirror.org/gentoo/ ftp://ftp.wh2.tu-dresden.de/pub/mirrors/gentoo rsync://mirror.netcologne.de/gentoo/ http://mirror.netcologne.de/gentoo/ ftp://mirror.netcologne.de/gentoo/ http://linux.rz.ruhr-uni-bochum.de/download/gentoo-mirror/ rsync://ftp.halifax.rwth-aachen.de/gentoo/ http://ftp.halifax.rwth-aachen.de/gentoo/ ftp://ftp.halifax.rwth-aachen.de/gentoo/ ftp://sunsite.informatik.rwth-aachen.de/pub/Linux/gentoo http://ftp.spline.inf.fu-berlin.de/mirrors/gentoo/ ftp://ftp.spline.inf.fu-berlin.de/mirrors/gentoo/ ftp://ftp.uni-erlangen.de/pub/mirrors/gentoo http://ftp.uni-erlangen.de/pub/mirrors/gentoo ftp://ftp-stud.hs-esslingen.de/pub/Mirrors/gentoo/ rsync://ftp-stud.hs-esslingen.de/gentoo/ http://ftp-stud.hs-esslingen.de/pub/Mirrors/gentoo/" LANG="de_DE.UTF-8" LDFLAGS="-Wl,-O1 -Wl,--as-needed" MAKEOPTS="-j5" PKGDIR="/usr/portage/packages" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git" PORTAGE_TMPDIR="/var/tmp" USE="3dnow X a52 aac acl acpi akonadi alsa amd64 apache2 avi berkdb bluetooth branding bzip2 cairo cdda cddb cdr cleartype cli corefonts cracklib crypt cups cxx dbus declarative dga divx dts dv dvd dvdr dvdread emboss encode exif fam fame firefox flac fortran gdbm gif glamor gphoto2 gpm gps gtk gtk2 gtk3 gudev iconv icu introspection ipv6 java java6 javascript jpeg jpeg2k kde kipi lcms ldap libnotify lm_sensors mad midi mjpeg mmx mmxext mng modules mp3 mp4 mpeg msn multilib ncurses networkmanager nls nptl nvidia ogg opengl openmp pam pango pcre pda pdf phonon plasma png policykit ppds python qml qt3support qt4 qt5 quicktime raw readline samba scanner sdl seccomp semantic-dsktop session smp spell sql sse sse2 ssl startup-notification subtitles svg syslog systemd tcpd threads tiff timidity truetype type1 udev udisks unicode upower usb v4l v4l2 vcd vorbis wavpack widgets win32codecs wmf wxwidgets x264 xattr xcb xcomposite xine xml xpm xscreensaver xv xvid zlib" ABI_X86="64 32" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="3dnow 3dnowext mmx mmxext popcnt sse sse2 sse3 sse4a" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="keyboard mouse evdev wacom" KERNEL="linux" L10N="de" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="de" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-6" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_4" RUBY_TARGETS="ruby20 ruby21" SANE_BACKENDS="hp" USERLAND="GNU" VIDEO_CARDS="nvidia" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" Unset: CC, CPPFLAGS, CTARGET, CXX, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON JYTHON: Installierte Versionen: 2.7.0(2.7)^t(22:06:16 15.10.2016)(readline -doc -examples -source -test ELIBC="-FreeBSD") Startseite: http://www.jython.org Beschreibung: An implementation of Python written in Java starting lightzone in console: Running Java version 1.7.0_101 (amd64) java.lang.NoClassDefFoundError: javax/help/HelpSetException at java.lang.Class.forName0(Native Method) at java.lang.Class.forName(Class.java:195) at com.lightcrafts.platform.Platform.<clinit>(Platform.java:407) at com.lightcrafts.platform.Launcher.init(Launcher.java:33) at com.lightcrafts.platform.linux.LinuxLauncher.main(LinuxLauncher.java:11) Caused by: java.lang.ClassNotFoundException: javax.help.HelpSetException at java.net.URLClassLoader$1.run(URLClassLoader.java:366) at java.net.URLClassLoader$1.run(URLClassLoader.java:355) at java.security.AccessController.doPrivileged(Native Method) at java.net.URLClassLoader.findClass(URLClassLoader.java:354) at java.lang.ClassLoader.loadClass(ClassLoader.java:425) at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:308) at java.lang.ClassLoader.loadClass(ClassLoader.java:358) ... 5 more Any workaround welcome.... please help!
Package removed.
