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Bug 572528 - media-libs/opencv-2.4.9 fails: /usr/include/setjmp.h:59:12: error: conflicting types for '__sigsetjmp
Summary: media-libs/opencv-2.4.9 fails: /usr/include/setjmp.h:59:12: error: conflictin...
Status: RESOLVED FIXED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: [OLD] Library (show other bugs)
Hardware: All Linux
: Normal normal (vote)
Assignee: Amy Liffey
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2016-01-21 14:20 UTC by Franz Trischberger
Modified: 2016-05-28 11:55 UTC (History)
3 users (show)

See Also:
Package list:
Runtime testing required: ---


Attachments
build.log (opencv-build.log,259.60 KB, text/plain)
2016-01-21 14:20 UTC, Franz Trischberger
Details

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Description Franz Trischberger 2016-01-21 14:20:21 UTC
Created attachment 423492 [details]
build.log

In file included from /var/tmp/portage/media-libs/opencv-2.4.9/work/opencv-2.4.9/modules/ts/src/ts.cpp:114:
/usr/include/setjmp.h:59:12: error: conflicting types for '__sigsetjmp'
extern int __sigsetjmp (struct __jmp_buf_tag __env[1], int __savemask) __THROWNL;
           ^
/usr/include/pthread.h:743:12: note: previous declaration is here
extern int __sigsetjmp (struct __jmp_buf_tag *__env, int __savemask) __THROWNL


I found this issue which says this is fixed:
https://bugs.gentoo.org/show_bug.cgi?id=494388

I use glibc-2.22-r1:
2.22-r1(2.2)^s(12:39:01 23.10.2015)(multilib -debug -gd -hardened -nscd -profile -selinux -suid -systemtap -vanilla CROSSCOMPILE_OPTS="-headers-only"
Comment 1 Franz Trischberger 2016-01-21 14:22:38 UTC
❯ emerge --info
Portage 2.2.27 (python 3.4.3-final-0, default/linux/amd64/13.0/desktop, gcc-4.9.3, glibc-2.22-r1, 4.3.3-gentoo x86_64)
=================================================================
System uname: Linux-4.3.3-gentoo-x86_64-Intel-R-_Core-TM-_i3-2350M_CPU_@_2.30GHz-with-gentoo-2.2
KiB Swap:    5242876 total,   5219820 free
Timestamp of repository gentoo: Thu, 21 Jan 2016 07:02:34 +0000
sh bash 4.3_p42-r1
ld GNU gold (Gentoo 2.25.1 p1.1 2.25.1) 1.11
distcc 3.2rc1 x86_64-pc-linux-gnu [enabled]
app-shells/bash:          4.3_p42-r1::gentoo
dev-java/java-config:     2.2.0::gentoo
dev-lang/perl:            5.20.2::gentoo
dev-lang/python:          2.7.10-r1::gentoo, 3.4.3-r1::gentoo
dev-util/cmake:           3.4.2::gentoo
dev-util/pkgconfig:       0.29::gentoo
sys-apps/baselayout:      2.2::gentoo
sys-apps/openrc:          0.20.3::gentoo
sys-apps/sandbox:         2.10-r1::gentoo
sys-devel/autoconf:       2.13::gentoo, 2.69::gentoo
sys-devel/automake:       1.11.6-r1::gentoo, 1.12.6::gentoo, 1.13.4::gentoo, 1.14.1::gentoo, 1.15::gentoo
sys-devel/binutils:       2.25.1-r1::gentoo
sys-devel/gcc:            4.9.3::gentoo
sys-devel/gcc-config:     1.7.3::gentoo
sys-devel/libtool:        2.4.6::gentoo
sys-devel/make:           4.1-r1::gentoo
sys-kernel/linux-headers: 4.3::gentoo (virtual/os-headers)
sys-libs/glibc:           2.22-r1::gentoo
Repositories:

gentoo
    location: /var/repositories/gentoo
    sync-type: git
    sync-uri: https://github.com/gentoo-mirror/gentoo
    priority: -1000

aidecoe
    location: /var/repositories/aidecoe
    sync-type: git
    sync-uri: git://github.com/aidecoe/aidecoe-overlay.git
    masters: gentoo

dlang
    location: /var/repositories/dlang
    sync-type: git
    sync-uri: https://github.com/gentoo/dlang.git
    masters: gentoo

ff2000
    location: /var/repositories/ff2000
    masters: gentoo
    eclass-overrides: qt kde

fflua
    location: /var/repositories/fflua
    masters: gentoo

gnome
    location: /var/repositories/gnome
    sync-type: git
    sync-uri: https://anongit.gentoo.org/git/proj/gnome.git
    masters: gentoo

kde
    location: /var/repositories/kde
    sync-type: git
    sync-uri: https://anongit.gentoo.org/git/proj/kde.git
    masters: gentoo

local
    location: /var/repositories/local
    masters: gentoo
    eclass-overrides: qt

lua
    location: /var/repositories/lua
    sync-type: git
    sync-uri: https://anongit.gentoo.org/git/proj/lua.git
    masters: gentoo

mv
    location: /var/repositories/mv
    sync-type: git
    sync-uri: https://anongit.gentoo.org/git/user/mv.git
    masters: gentoo

qt
    location: /var/repositories/qt
    sync-type: git
    sync-uri: https://github.com/gentoo/qt
    masters: gentoo

qutebrowser
    location: /var/repositories/qutebrowser
    masters: gentoo

ruby_ff
    location: /var/repositories/ruby_ff
    masters: gentoo

sage-on-gentoo
    location: /var/repositories/sagemath
    sync-type: git
    sync-uri: https://github.com/cschwan/sage-on-gentoo.git
    masters: gentoo science

science
    location: /var/repositories/science
    masters: gentoo

tlp
    location: /var/repositories/tlp
    sync-type: git
    sync-uri: https://github.com/dywisor/tlp-portage
    masters: gentoo

yngwin
    location: /var/repositories/yngwin
    sync-type: git
    sync-uri: https://anongit.gentoo.org/git/dev/yngwin.git
    masters: gentoo

ACCEPT_KEYWORDS="amd64"
ACCEPT_LICENSE="*"
CBUILD="x86_64-pc-linux-gnu"
CC="clang"
CFLAGS="-march=corei7-avx -O2 -pipe -ggdb"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /lib/modules /usr/share/gnupg/qualified.txt"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c"
CXX="clang++"
CXXFLAGS="-march=corei7-avx -O2 -pipe -ggdb"
DISTDIR="/var/distfiles"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-logs config-protect-if-modified distcc distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch preserve-libs protect-owned sandbox sfperms splitdebug strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-O2 -pipe"
GENTOO_MIRRORS="http://distfiles.gentoo.org"
LANG="de_DE.UTF-8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j11"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git"
PORTAGE_TMPDIR="/var/tmp"
USE="X a52 aac acl acpi alsa amd64 apm berkdb branding bzip2 cairo cdda cdr cli cracklib crypt cups cxx dbus directfb dri dts dvd dvdr emboss encode exif fam ffmpeg firefox flac fortran gdbm gif glamor gpm iconv infinality introspection ipv6 jpeg jpeg2k kipi lcdfilter lcms mad mmx mmxext mng modules mp3 mp4 mpeg multilib ncurses nls nptl ogg opengl openmp openrc pam pango pcre pdf png policykit ppds pulse pulseaudio readline sdl seccomp session spell sse sse2 sse3 sse4 sse4_1 ssl ssse3 svg systemd tcpd theora threads tiff truetype udev udisks unicode upower usb vaapi vorbis vpx x264 xattr xcb xcomposite xml xscreensaver xv xvid zlib zsh-completion" ABI_X86="64" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="krita sheets stage words" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="avx mmx mmxext popcnt sse sse2 sse3 sse4_1 sse4_2 ssse3" ELIBC="glibc" ENLIGHTENMENT_MODULES="appmenu backlight battery bluez4 clock conf conf-applications conf-bindings conf-comp conf-dialogs conf-display conf-interaction conf-intl conf-menus conf-paths conf-performance conf-randr conf-shelves conf-theme conf-wallpaper2 conf-window-manipulation conf-window-remembers connman contact cpufreq everything fileman fileman-opinfo gadman ibar ibox lokker mixer msgbus music-control notification pager pager16 pager-plain quickaccess shot start syscon systray tasks teamwork temperature tiling winlist wizard xkbswitch wl-desktop-shell wl-drm wl-fb wl-text-input wl-wl wl-x11 xwayland" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="evdev wacom" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="de de_DE" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-5" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_4 python3_4" RUBY_TARGETS="ruby21 ruby22 rbx" SANE_BACKENDS="epson epson2" USERLAND="GNU" VIDEO_CARDS="intel i965" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON
Comment 2 Amy Liffey gentoo-dev 2016-05-15 08:20:07 UTC
Can you please try to install version 2.4.12 ?

Thank you

Amy
Comment 3 Amy Liffey gentoo-dev 2016-05-28 11:55:56 UTC
Version is not in tree any more.

Amy