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Bug 569060 - media-video/movit-1.2.0 fails to build - util.h:9:22: fatal error: Eigen/Core: No such file or directory
Summary: media-video/movit-1.2.0 fails to build - util.h:9:22: fatal error: Eigen/Core...
Status: RESOLVED TEST-REQUEST
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: Normal normal (vote)
Assignee: Patrick Lauer
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2015-12-21 20:56 UTC by Juergen Rose
Modified: 2016-05-11 17:56 UTC (History)
4 users (show)

See Also:
Package list:
Runtime testing required: ---


Attachments
build.log (build.log,15.80 KB, text/x-log)
2015-12-21 20:56 UTC, Juergen Rose
Details
example patch to solve eigen3 problem and libpng16 (movit-1.1.3-eigen3-libpng16.patch,3.68 KB, patch)
2015-12-22 00:28 UTC, Attila Tóth
Details | Diff
An ebuild using the patch of comment 2 (movit-1.2.0.ebuild,900 bytes, text/plain)
2015-12-22 17:29 UTC, Juergen Rose
Details
A working movit-1.2.0.ebuild (movit-1.2.0.ebuild,900 bytes, text/plain)
2015-12-22 17:42 UTC, Juergen Rose
Details

Note You need to log in before you can comment on or make changes to this bug.
Description Juergen Rose 2015-12-21 20:56:16 UTC
Created attachment 420082 [details]
build.log

'emerge movit' fails with:
...
libtool: compile:  x86_64-pc-linux-gnu-g++ -MMD -MP -Wall -march=native -O2 -pipe -fvisibility-inlines-hidden -I/var/tmp/portage/media-video/movit-1.2.0/work/gtest-1.7.0/include -D_REENTRANT -I/usr/include/SDL2 -Iinclude/eigen3 -DHAVE_SDL2 -c ycbcr.cpp  -fPIC -DPIC -o .libs/ycbcr.o
libtool: compile:  x86_64-pc-linux-gnu-g++ -MMD -MP -Wall -march=native -O2 -pipe -fvisibility-inlines-hidden -I/var/tmp/portage/media-video/movit-1.2.0/work/gtest-1.7.0/include -D_REENTRANT -I/usr/include/SDL2 -Iinclude/eigen3 -DHAVE_SDL2 -c init.cpp  -fPIC -DPIC -o .libs/init.o
ycbcr.cpp:4:22: fatal error: Eigen/Core: No such file or directory
 #include <Eigen/Core>
                      ^
compilation terminated.
Makefile:126: recipe for target 'ycbcr.lo' failed
make: *** [ycbcr.lo] Error 1
make: *** Waiting for unfinished jobs....
In file included from resource_pool.cpp:13:0:
util.h:9:22: fatal error: Eigen/Core: No such file or directory
...
16.cpp -o fp16.o >/dev/null 2>&1
[ ! -r fp16.d ] || sed 's/\.o:/\.lo:/' < fp16.d > fp16.ld
[ ! -r .libs/fp16.d ] || sed 's/\.o:/\.lo:/' < .libs/fp16.d > .libs/fp16.ld
 * ERROR: media-video/movit-1.2.0::gentoo failed (compile phase):





root@lynx:/root(40)# emerge --info '=media-video/movit-1.2.0::gentoo'
Portage 2.2.26 (python 3.4.3-final-0, default/linux/amd64/13.0/desktop, gcc-4.9.3, glibc-2.22-r1, 4.3.3-gentoo x86_64)
=================================================================
                         System Settings
=================================================================
System uname: Linux-4.3.3-gentoo-x86_64-Intel-R-_Core-TM-_i7-3630QM_CPU_@_2.40GHz-with-gentoo-2.2
KiB Mem:    15207056 total,   3636004 free
KiB Swap:   50331644 total,  50249464 free
Timestamp of repository gentoo: Mon, 21 Dec 2015 17:30:01 +0000
sh bash 4.3_p42
ld GNU ld (Gentoo 2.25.1 p1.1) 2.25.1
distcc[18068] (dcc_trace_version) distcc 3.2rc1 x86_64-pc-linux-gnu; built Dec 12 2015 19:11:03 [disabled]
app-shells/bash:          4.3_p42::gentoo
dev-java/java-config:     2.2.0::gentoo
dev-lang/perl:            5.22.1::gentoo
dev-lang/python:          2.7.11-r1::gentoo, 3.4.3-r6::gentoo, 3.5.1-r1::gentoo
dev-util/cmake:           3.4.1::gentoo
dev-util/pkgconfig:       0.29::gentoo
sys-apps/baselayout:      2.2::gentoo
sys-apps/openrc:          0.19.1::gentoo
sys-apps/sandbox:         2.10-r1::gentoo
sys-devel/autoconf:       2.13::gentoo, 2.69-r1::gentoo
sys-devel/automake:       1.9.6-r4::gentoo, 1.11.6-r2::gentoo, 1.12.6-r1::gentoo, 1.13.4-r1::gentoo, 1.14.1-r1::gentoo, 1.15-r1::gentoo
sys-devel/binutils:       2.25.1-r1::gentoo
sys-devel/gcc:            4.9.3::gentoo, 5.3.0::gentoo
sys-devel/gcc-config:     1.8::gentoo
sys-devel/libtool:        2.4.6-r1::gentoo
sys-devel/make:           4.1-r1::gentoo
sys-kernel/linux-headers: 4.3::gentoo (virtual/os-headers)
sys-libs/glibc:           2.22-r1::gentoo
Repositories:

gentoo
    location: /usr/portage_lynx
    sync-type: rsync
    sync-uri: rsync://rsync.gentoo.org/gentoo-portage
    priority: -1000

sage-on-gentoo
    location: /var/lib/layman/sage-on-gentoo
    masters: gentoo science
    priority: 0

science
    location: /var/lib/layman/science
    masters: gentoo
    priority: 1

sunrise
    location: /var/lib/layman/sunrise
    masters: gentoo
    priority: 2

x11
    location: /var/lib/layman/x11
    masters: gentoo
    priority: 3

ago
    location: /var/lib/layman/ago
    masters: gentoo
    priority: 4

tlp
    location: /var/lib/layman/tlp
    masters: gentoo
    priority: 5

local
    location: /usr/local/portage
    masters: gentoo
    priority: 6

g-cpan
    location: /var/lib/cpan
    masters: gentoo
    priority: 7

g-octave
    location: /var/lib/g-octave
    masters: gentoo
    priority: 8

Installed sets: @system
ACCEPT_KEYWORDS="amd64 ~amd64"
ACCEPT_LICENSE="* -@EULA PUEL Intel-SDP dlj-1.1 skype-eula skype-4.0.0.7-copyright googleearth AdobeFlash-11.x cadsoft Oracle-BCLA-JavaSE MakeMKV-EULA NVIDIA-CUDA Nero-AAC-EULA GIMPS"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=native -O2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /etc/stunnel/stunnel.conf /usr/lib64/libreoffice/program/sofficerc /usr/share/config /usr/share/gnupg/qualified.txt /var/lib/hsqldb"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php5.6/ext-active/ /etc/php/apache2-php7.0/ext-active/ /etc/php/cgi-php5.6/ext-active/ /etc/php/cgi-php7.0/ext-active/ /etc/php/cli-php5.6/ext-active/ /etc/php/cli-php7.0/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c"
CXXFLAGS="-march=native -O2 -pipe"
DISTDIR="/usr/portage/distfiles"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-march=native -O2 -pipe"
GENTOO_MIRRORS="http://distfiles.gentoo.org"
LANG="en_US.UTF-8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j9"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
USE="64bit R X Xaw3d a52 aac acl acpi admin afs alsa amd64 amr ao apache2 apng applet archive armadillo arpack asf aspell assistant atlas audacious audiofile automap automount bash-completion berkdb blas blast bluetooth bluray boost branding bzip2 cairo cdda cddb cdf cdio cdparanoia cdr cg cgi chm cilk cli cmake collada consolekit cracklib crypt css cups curl cxx daap db dbi dbm dbus declarative designer devhelp device-mapper dga dia dirac djvu doc dot dri ds2490 ds9097 ds9097u dts dv dvb dvd dvdr dvi dynamicplugin eds egl elf emacs emboss emf encode epiphany evo examples excel exif expat extensions extra extras faac faad fam ffmpeg fftw firefox fits flac fltk fontconfig foomaticdb fortran fortran95 fpm fpx ftp fuse gcj gd gdal gdbm gdu gedit geoip geolocation geos gfortran gif gimp git glade glamor glib glpk gml gmp gnome gnome-keyring gnuplot gnutls gold gphoto2 gpm grammar graphics graphtft graphviz grass gsl gsm gstreamer gtk gtk3 gudev guile hdaps hddtemp hdf hdf5 hdri html http httpd hvm hwdb iconv icq icu id3tag ide imagemagick imap inotify introspection ipod ipv6 irda ithreads jadetex java jbig jit john jpeg jpeg2k kate kde kdepim kdrive kerberos keymap kpathsea kvm ladspa lame lapack latex lcms ldap lensfun libffi libgda libkms libnotify libsamplerate lirc live lua lzma lzo mad mail maildir mapnik math matroska media-library mercurial mikmod mkl mmx mmxext mng mod modules mono motif mozilla mp3 mp4 mpeg mpi mpi-threads mplayer mtp multilib multimedia musepack musicbrainz mysql mysqli nautilus ncurses neXt netcdf netpbm network networking nfs nls nntp nptl nsplugin ntfs ntp numpy obex objc ocaml ocr octave odbc ofa ogdi ogg opencl opencv openexr opengl openmp openvg pam pango pcre pda pdf pdl2 perl plasma plotutils plugins png podcast policykit portaudio posix postgres postscript ppds preview-latex proj projectm pstricks pulseaudio python q16 q32 qemu qhull qt3support qt4 qt5 quicktime raw readline reiserfs reports rle romio rpc rrdcgi rrdtool rtlsdr sage samba sasl schroedinger science sdk sdl seccomp secure-delete semantic-desktop server session shout sip slang slp smart smbclient smp sms sndfile snmp soap sockets sound soup sox speex spell sql sqlite sse sse2 ssl startup-notification stlport subtitles subversion sudo suexec svg svm swig systemd szip t1lib tbb tcl tcpd tex tex4ht texmacs theora thesaurus thinkpad threads thunderbird tidy tiff tk tools truetype udev udisks unicode upower usb utempter v4l v4l2 vaapi vala valgrind vdpau video virt-network virtualbox visio vorbis vpx vtk wav webdav webdav-serf webkit wifi wmf wxwidgets x264 xa xattr xcb xetex xext xft xine xml xmlreader xmlrpc xpm xv xvid xvmc yaml youtube zlib zvbi" ABI_X86="64" ALSA_CARDS="intel8x0" APACHE2_MODULES="actions alias auth_basic auth_digest authn_anon authn_dbd authn_core authn_dbm authn_default authn_file authz_core authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgid dav dav_fs dav_lock dbd deflate dir disk_cache env expires ext_filter file_cache filter headers ident imagemap include info lbmethod_byrequests log_config logio mem_cache mime mime_magic negotiation proxy proxy_ajp proxy_balancer proxy_connect proxy_http rewrite setenvif slotmem_shm so socache_shmcb speling status unique_id unixd userdir usertrack vhost_alias" APACHE2_MPMS="worker" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="canon fuji ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog sensors thermal" CPU_FLAGS_X86="aes avx mmx mmxext popcnt sse sse2 sse3 sse4_1 sse4_2 ssse3" CURL_SSL="nss" DVB_CARDS="usb-wt220u dvb_usb_rtl28xxu" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="keyboard mouse evdev synaptics void" KERNEL="linux" LCD_DEVICES="cfontz hd44780 mtxorb ncurses X lcd2usb lcdlinux png usblcd SureElec" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="de en fr ru" LIRC_DEVICES="devinput" NETBEANS_MODULES="apisupport cnd dlight enterprise ergonomics groovy gsf harness ide identity j2ee java mobility nb php profiler websvccommon xml" OFFICE_IMPLEMENTATION="libreoffice" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_4" QEMU_SOFTMMU_TARGETS="arm i386 x86_64" QEMU_USER_TARGETS="arm i386 x86_64" RUBY_TARGETS="ruby20 ruby21" USERLAND="GNU" VIDEO_CARDS="nouveau displaylink" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CC, CPPFLAGS, CTARGET, CXX, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON





root@lynx:/root(41)# emerge -pqv '=media-video/movit-1.2.0::gentoo'
[ebuild     U ] media-video/movit-1.2.0 [1.1.3]
Comment 1 Attila Tóth 2015-12-21 23:29:06 UTC
The reason behind that is eigen-3 installs incorrect pkg-config file. The configure script of movit calls pkg-config, that reports incorrect cflags. Therefore it tries to use incorrect include directory (-Iinclude/eigen3). Either eigen3 pc file must be corrected, or should teach the configure script to use the correct include dir in its cflags. That can be done either by setting en environmental variable or hardcoding it in the config script instead of calling pkg-config.

Side-note: movit doesn't detect libpng, because it looks for libpng12...
Comment 2 Attila Tóth 2015-12-22 00:28:57 UTC
Created attachment 420122 [details, diff]
example patch to solve eigen3 problem and libpng16

It's against 1.1.3, and configure screws up build directory structure, but it shows an alternative solution. Works for me.
Comment 3 Juergen Rose 2015-12-22 17:29:35 UTC
Created attachment 420318 [details]
An ebuild using the patch of comment 2
Comment 4 Juergen Rose 2015-12-22 17:34:28 UTC
I tried to emerge movit with the patch of comment2 and the ebuild comment 3, but it failed with:
...
root@lynx:/usr/local/portage/media-video/movit(85)# emerge -v1 movit

 * IMPORTANT: 1 news items need reading for repository 'gentoo'.
 * Use eselect news read to view new items.

These are the packages that would be merged, in order:

Calculating dependencies... done!
[ebuild     U  ] media-video/movit-1.2.0::local [1.1.3::gentoo] 0 KiB

Total: 1 package (1 upgrade), Size of downloads: 0 KiB

>>> Verifying ebuild manifests
>>> Emerging (1 of 1) media-video/movit-1.2.0::local
 * movit-1.2.0.tar.gz SHA256 SHA512 WHIRLPOOL size ;-) ...              [ ok ]
 * gtest-1.7.0.zip SHA256 SHA512 WHIRLPOOL size ;-) ...                 [ ok ]
>>> Unpacking source...
>>> Unpacking movit-1.2.0.tar.gz to /var/tmp/portage/media-video/movit-1.2.0/work
>>> Unpacking gtest-1.7.0.zip to /var/tmp/portage/media-video/movit-1.2.0/work
>>> Source unpacked in /var/tmp/portage/media-video/movit-1.2.0/work
>>> Preparing source in /var/tmp/portage/media-video/movit-1.2.0/work/movit-1.2.0 ...
src_prepare:  PN=|movit|
 * Applying movit-1.1.3-eigen3-libpng16.patch ...                       [ ok ]
 * Running eautoreconf in '/var/tmp/portage/media-video/movit-1.2.0/work/movit-1.2.0' ...
 * Running libtoolize --install --copy --force ...                      [ ok ]
 * Running aclocal ...                                                  [ ok ]
 * Running autoconf --force ...                                         [ ok ]
 * Running elibtoolize in: movit-1.2.0/
 *   Applying portage/1.2.0 patch ...
 *   Applying sed/1.5.6 patch ...
 *   Applying as-needed/2.4.3 patch ...
>>> Source prepared.
>>> Configuring source in /var/tmp/portage/media-video/movit-1.2.0/work/movit-1.2.0 ...
 * econf: updating gtest-1.7.0/build-aux/config.sub with /usr/share/gnuconfig/config.sub
 * econf: updating gtest-1.7.0/build-aux/config.guess with /usr/share/gnuconfig/config.guess
 * econf: updating movit-1.2.0/config.sub with /usr/share/gnuconfig/config.sub
 * econf: updating movit-1.2.0/config.guess with /usr/share/gnuconfig/config.guess
./configure --prefix=/usr --build=x86_64-pc-linux-gnu --host=x86_64-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --libdir=/usr/lib64
configure: loading site script /usr/share/config.site
checking build system type... x86_64-pc-linux-gnu
checking host system type... x86_64-pc-linux-gnu
...
config.status: executing libtool commands
>>> Source configured.
>>> Compiling source in /var/tmp/portage/media-video/movit-1.2.0/work/movit-1.2.0 ...
make -j9 
/bin/sh ./libtool --tag=CXX --mode=compile x86_64-pc-linux-gnu-g++ -MMD -MP  -Wall -march=native -O2 -pipe -fvisibility-inlines-hidden -I/var/tmp/portage/media-video/movit-1.2.0/work/gtest-1.7.0/include -D_REENTRANT -I/usr/include/SDL2  -Iinclude/eigen3   -DHAVE_SDL2 -o effect_util.lo -c effect_util.cpp
/bin/sh ./libtool --tag=CXX --mode=compile x86_64-pc-linux-gnu-g++ -MMD -MP  -Wall -march=native -O2 -pipe -fvisibility-inlines-hidden -I/var/tmp/portage/media-video/movit-1.2.0/work/gtest-1.7.0/include -D_REENTRANT -I/usr/include/SDL2  -Iinclude/eigen3   -DHAVE_SDL2 -o util.lo -c util.cpp
...
libtool: compile:  x86_64-pc-linux-gnu-g++ -MMD -MP -Wall -march=native -O2 -pipe -fvisibility-inlines-hidden -I/var/tmp/portage/media-video/movit-1.2.0/work/gtest-1.7.0/include -D_REENTRANT -I/usr/include/SDL2 -Iinclude/eigen3 -DHAVE_SDL2 -c ycbcr.cpp  -fPIC -DPIC -o .libs/ycbcr.o
In file included from widgets.cpp:5:0:
util.h:9:22: fatal error: Eigen/Core: No such file or directory
 #include <Eigen/Core>
                      ^
compilation terminated.
Makefile:126: recipe for target 'widgets.lo' failed
make: *** [widgets.lo] Error 1
Comment 5 Juergen Rose 2015-12-22 17:39:21 UTC
Comment on attachment 420318 [details]
An ebuild using the patch of comment 2

Bad ebuild
Comment 6 Juergen Rose 2015-12-22 17:42:59 UTC
Created attachment 420320 [details]
A working movit-1.2.0.ebuild

This is an ebuild using the patch of Comment 2 but it does not perform 
eautoreconf. It seems to work.
Comment 7 Attila Tóth 2015-12-23 22:16:16 UTC
See also: https://bugs.gentoo.org/show_bug.cgi?id=569544
Comment 8 Michael Palimaka (kensington) gentoo-dev 2016-05-11 17:56:17 UTC
This was likely caused by the broken eigen pkgconfig file which is since fixed.