Gentoo Websites Logo
Go to: Gentoo Home Documentation Forums Lists Bugs Planet Store Wiki Get Gentoo!
Bug 567018 - app-doc/doxygen-1.8.10-r1 : configure fails with sys-devel/flex-2.6.0
Summary: app-doc/doxygen-1.8.10-r1 : configure fails with sys-devel/flex-2.6.0
Status: RESOLVED FIXED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: Normal normal (vote)
Assignee: Development Tools Team
URL: https://github.com/doxygen/doxygen/pu...
Whiteboard:
Keywords:
Depends on:
Blocks: flex-2.6
  Show dependency tree
 
Reported: 2015-11-28 09:08 UTC by Toralf Förster
Modified: 2015-12-10 23:47 UTC (History)
4 users (show)

See Also:
Package list:
Runtime testing required: ---


Attachments
app-doc:doxygen-1.8.10-r1:20151128-081322.log (app-doc:doxygen-1.8.10-r1:20151128-081322.log,42.67 KB, text/plain)
2015-11-28 09:08 UTC, Toralf Förster
Details
emerge-history.txt (emerge-history.txt,160.49 KB, text/plain)
2015-11-28 09:08 UTC, Toralf Förster
Details
environment (environment,151.67 KB, text/plain)
2015-11-28 09:08 UTC, Toralf Förster
Details

Note You need to log in before you can comment on or make changes to this bug.
Description Toralf Förster gentoo-dev 2015-11-28 09:08:12 UTC
cd /var/tmp/portage/app-doc/doxygen-1.8.10-r1/work/doxygen-1.8.10_build/src && /usr/bin/x86_64-pc-linux-gnu-g++  -DYY_BUF_SIZE=262144 -DYY_READ_BUF_SIZE=262144 -I/var/tmp/portage/app-doc/doxygen-1.8.10-r1/work/doxygen-1.8.10/qtools -I/var/tmp/portage/app-doc/doxygen-1.8.10-r1/work/doxygen-1.8.10/libmd5 -I/var/tmp/portage/app-doc/doxygen-1.8.10-r1/work/doxygen-1.8.10/vhdlparser -I/var/tmp/portage/app-doc/doxygen-1.8.10-r1/work/doxygen-1.8.10/src -I/var/tmp/portage/app-doc/doxygen-1.8.10-r1/work/doxygen-1.8.10_build/generated_src   -DNDEBUG -march=native -O2 -pipe    -o CMakeFiles/_doxygen.dir/__/generated_src/resources.cpp.o -c /var/tmp/portage/app-doc/doxygen-1.8.10-r1/work/doxygen-1.8.10_build/generated_src/resources.cpp
[ 32%] Building CXX object src/CMakeFiles/_doxygen.dir/__/generated_src/scanner.cpp.o
cd /var/tmp/portage/app-doc/doxygen-1.8.10-r1/work/doxygen-1.8.10_build/src && /usr/bin/x86_64-pc-linux-gnu-g++  -DYY_BUF_SIZE=262144 -DYY_READ_BUF_SIZE=262144 -I/var/tmp/portage/app-doc/doxygen-1.8.10-r1/work/doxygen-1.8.10/qtools -I/var/tmp/portage/app-doc/doxygen-1.8.10-r1/work/doxygen-1.8.10/libmd5 -I/var/tmp/portage/app-doc/doxygen-1.8.10-r1/work/doxygen-1.8.10/vhdlparser -I/var/tmp/portage/app-doc/doxygen-1.8.10-r1/work/doxygen-1.8.10/src -I/var/tmp/portage/app-doc/doxygen-1.8.10-r1/work/doxygen-1.8.10_build/generated_src   -DNDEBUG -march=native -O2 -pipe    -o CMakeFiles/_doxygen.dir/__/generated_src/scanner.cpp.o -c /var/tmp/portage/app-doc/doxygen-1.8.10-r1/work/doxygen-1.8.10_build/generated_src/scanner.cpp
[ 33%] Building CXX object src/CMakeFiles/_doxygen.dir/__/generated_src/code.cpp.o
cd /var/tmp/portage/app-doc/doxygen-1.8.10-r1/work/doxygen-1.8.10_build/src && /usr/bin/x86_64-pc-linux-gnu-g++  -DYY_BUF_SIZE=262144 -DYY_READ_BUF_SIZE=262144 -I/var/tmp/portage/app-doc/doxygen-1.8.10-r1/work/doxygen-1.8.10/qtools -I/var/tmp/portage/app-doc/doxygen-1.8.10-r1/work/doxygen-1.8.10/libmd5 -I/var/tmp/portage/app-doc/doxygen-1.8.10-r1/work/doxygen-1.8.10/vhdlparser -I/var/tmp/portage/app-doc/doxygen-1.8.10-r1/work/doxygen-1.8.10/src -I/var/tmp/portage/app-doc/doxygen-1.8.10-r1/work/doxygen-1.8.10_build/generated_src   -DNDEBUG -march=native -O2 -pipe    -o CMakeFiles/_doxygen.dir/__/generated_src/code.cpp.o -c /var/tmp/portage/app-doc/doxygen-1.8.10-r1/work/doxygen-1.8.10_build/generated_src/code.cpp
code.l:3700:2: error: #error "You seem to be using a version of flex newer than 2.5.4 but older than 2.5.33. These versions do NOT work with doxygen! Please use version <=2.5.4 or >=2.5.33 or expect things to be parsed wrongly!"
src/CMakeFiles/_doxygen.dir/build.make:353: recipe for target 'src/CMakeFiles/_doxygen.dir/__/generated_src/code.cpp.o' failed
make[2]: *** [src/CMakeFiles/_doxygen.dir/__/generated_src/code.cpp.o] Error 1
make[2]: Leaving directory '/var/tmp/portage/app-doc/doxygen-1.8.10-r1/work/doxygen-1.8.10_build'
CMakeFiles/Makefile2:254: recipe for target 'src/CMakeFiles/_doxygen.dir/all' failed
make[1]: *** [src/CMakeFiles/_doxygen.dir/all] Error 2


$ cat ./info.txt
  -----------------------------------------------------------------

  This is an unstable amd64 chroot image (named amd64-plasma-unstable_20151124-161120) at a hardened host acting as a tinderbox.

  -----------------------------------------------------------------

  Portage 2.2.26 (python 2.7.10-final-0, default/linux/amd64/13.0/desktop/plasma, gcc-4.9.3, glibc-2.22-r1, 4.1.7-hardened-r1 x86_64)
=================================================================
System uname: Linux-4.1.7-hardened-r1-x86_64-Intel-R-_Core-TM-_i7-3770_CPU_@_3.40GHz-with-gentoo-2.2
KiB Mem:    16164644 total,   1392128 free
KiB Swap:          0 total,         0 free
Timestamp of repository gentoo: Sat, 28 Nov 2015 03:02:07 +0000
sh bash 4.3_p42
ld GNU ld (Gentoo 2.25.1 p1.1) 2.25.1
app-shells/bash:          4.3_p42::gentoo
dev-java/java-config:     2.2.0::gentoo
dev-lang/perl:            5.22.0::gentoo
dev-lang/python:          2.7.10-r3::gentoo, 3.4.3-r2::gentoo, 3.5.0-r1::gentoo
dev-util/cmake:           3.4.0-r1::gentoo
dev-util/pkgconfig:       0.29::gentoo
sys-apps/baselayout:      2.2::gentoo
sys-apps/openrc:          0.18.3::gentoo
sys-apps/sandbox:         2.9::gentoo
sys-devel/autoconf:       2.13::gentoo, 2.69-r1::gentoo
sys-devel/automake:       1.11.6-r1::gentoo, 1.12.6::gentoo, 1.13.4::gentoo, 1.14.1::gentoo, 1.15::gentoo
sys-devel/binutils:       2.25.1-r1::gentoo
sys-devel/gcc:            4.9.3::gentoo
sys-devel/gcc-config:     1.8::gentoo
sys-devel/libtool:        2.4.6-r1::gentoo
sys-devel/make:           4.1-r1::gentoo
sys-kernel/linux-headers: 4.3::gentoo (virtual/os-headers)
sys-libs/glibc:           2.22-r1::gentoo
Repositories:

gentoo
    location: /usr/portage
    sync-type: rsync
    sync-uri: rsync://rsync.gentoo.org/gentoo-portage
    priority: 1

local
    location: /usr/local/portage
    masters: gentoo
    priority: 2

ACCEPT_KEYWORDS="amd64 ~amd64"
ACCEPT_LICENSE="*"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=native -O2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /etc/entropy /usr/share/config /usr/share/gnupg/qualified.txt /var/lib/hsqldb"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c"
CXXFLAGS="-march=native -O2 -pipe"
DISTDIR="/var/tmp/distfiles"
EMERGE_DEFAULT_OPTS="--deep --color=n --nospinner --tree --quiet-build --accept-properties=-interactive --accept-restrict=-fetch"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles ipc-sandbox merge-sync network-sandbox news parallel-fetch preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-O2 -pipe"
GENTOO_MIRRORS="http://ftp.uni-erlangen.de/pub/mirrors/gentoo rsync://mirror.netcologne.de/gentoo/ ftp://sunsite.informatik.rwth-aachen.de/pub/Linux/gor.bytemark.co.uk/gentoo/ rsync://ftp.snt.utwente.nl/gentoo"
LANG="en_US.utf8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j1"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
USE="X a52 aac acl acpi alsa amd64 avx2 berkdb bindist bluetooth branding bzip2 cairo cdda cdr cli consolekit cracklib crypt cups custom-cflags cxx dbus declarative dot dri dts dvb dvd dvdr emboss encode exif extraengine fam ffmpeg firefox flac fpm ftp gdbm gif glamor gpm gtk gtk3 help iconv imlib ipv6 isag jadetex jpeg kde kipi lapack lcms ldap libnotify libvirtd logrotate mad mmx mmxext mng mod modules mp3 mp4 mpeg multilib ncurses nls nptl nss obj ogg opengl openmp pam pango pax_kernel pcre pdf phonon plasma png policykit ppds python qml qt3support qt4 qt5 readline scrypt sddm sdl seccomp semantic-desktop session source spell sqlite sse sse2 sse4_1 ssl ssse3 startup-notification svg tcpd theora threads tiff tk tls truetype udev udisks ufed unicode upower usb usbredir v4l vorbis vpx widgets wxwidgets x264 xattr xcb xcomposite xinerama xinetd xml xscreensaver xv xvid zlib" ABI_X86="64" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="aes avx mmx mmxext popcnt sse sse2 sse3 sse4_1 sse4_2 ssse3" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="keyboard mouse evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="en en_GB" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-5" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_4" RUBY_TARGETS="ruby20 ruby21" USERLAND="GNU" VIDEO_CARDS="fbdev glint intel mach64 mga nouveau nv r128 radeon savage sis tdfx trident vesa via vmware dummy v4l" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CC, CPPFLAGS, CTARGET, CXX, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON
Comment 1 Toralf Förster gentoo-dev 2015-11-28 09:08:14 UTC
Created attachment 418042 [details]
app-doc:doxygen-1.8.10-r1:20151128-081322.log
Comment 2 Toralf Förster gentoo-dev 2015-11-28 09:08:16 UTC
Created attachment 418044 [details]
emerge-history.txt
Comment 3 Toralf Förster gentoo-dev 2015-11-28 09:08:19 UTC
Created attachment 418046 [details]
environment
Comment 4 Thomas Capricelli 2015-12-02 18:33:06 UTC
Hit by this, too.

build.log:
code.l:3700:2: error: #error "You seem to be using a version of flex newer than 2.5.4 but older than 2.5.33. These versions do NOT work with doxygen! Please use version <=2.5.4 or >=2.5.33 or expect things to be parsed wrongly!"

eix tells me that i have sys-devel/flex-2.6.0, so I don't really understand the error message ...(?)
Comment 5 devsk 2015-12-10 19:21:34 UTC
Same issue here. Looks like the check thinks that 2.6.0 is older than 2.5.33, most likely because its comparing 0 from 2.6.0 against 33 from 2.5.33.
Comment 6 Matthias Maier gentoo-dev 2015-12-10 23:11:23 UTC
This is an error in doxygen's build system.
Comment 7 Matthias Maier gentoo-dev 2015-12-10 23:47:48 UTC
commit 01e26b007b888ff0b0931f41531319de2a8fbb8f
Author: Matthias Maier <tamiko@gentoo.org>
Date:   Thu Dec 10 17:25:08 2015 -0600

    app-doc/doxygen: fix version check for sys-devel/flex-2.6.0
    
    Apply a patch to fix doxygen's build system to successfully detect
    flex-2.6.0 as sufficiently modern version. The build system accidentally
    only compared the minor version number...
    
    Upstream: https://github.com/doxygen/doxygen/pull/413
    
    Gentoo-Bug: 567018
    
    Package-Manager: portage-2.2.26