Created attachment 408608 [details] archive containing build.log, build environment file, outputs of emerge --info and emerge -pqv As I try to update the system, some packages are marked for rebuild with python 3.4. The process stops pretty quickly with the following error: running install_egg_info Writing /tmp/portage/dev-java/java-config-2.2.0/image//_python3.4/usr/bin/lib64/python3.4/site-packages/java_config-2.2.0-py3.4.egg-info error: [Errno 2] No such file or directory: '/tmp/portage/dev-java/java-config-2.2.0/image//_python3.4/usr/share/java-config-2/config/ Note the "//" in the path before _python3.4. That's a clearly wrong path, there shouldn't be a double slash. I guess some environment variable got mixed up somewhere, but I'm not sure where to look for it. This bug prevents me from upgrading any package needing the new python3.4 flag, which is a huge problem. I'm attaching the environment file, build.log and outputs of emerge --info and emerge -pqv
(In reply to PusRob from comment #0) > Created attachment 408608 [details] > archive containing build.log, build environment file, outputs of emerge > --info and emerge -pqv In the future, please attach these separately. A single tarball is more difficult to work with quickly from a web browser. > Note the "//" in the path before _python3.4. That's a clearly wrong path, > there shouldn't be a double slash. I guess some environment variable got > mixed up somewhere, but I'm not sure where to look for it. The double-slash almost certainly has nothing to do with the issue you are experincing.
Your build log is nothing but 15481 null bytes. Please provide it as a plain-text attachment.
Created attachment 408716 [details] A new build.log
Created attachment 408718 [details] environment file
Created attachment 408720 [details] output of emerge --info
Created attachment 408722 [details] output of emerge -pqv
I'm unable to reproduce the error. It looks like setup.py defines a custom install function that calls os.mkdir on that path. Maybe in some circumstance the parent directory does not exist at that point.
So, could you give some ideas where and what to check for possible sources of the error? It's quite annoying not being able to update any python related packages...
(In reply to PusRob from comment #8) > So, could you give some ideas where and what to check for possible sources > of the error? It's quite annoying not being able to update any python > related packages... I have only seen information on a possible bug for one package (java-config). If you are encountering issues with other packages, please seek support on mailing lists, IRC, or forums. If you find another bug, feel free to report it separately.
Seems I can CONFIRM this bug on a Gentoo:prefix install (via bootstrap_rap.sh): creating /scratch/mmokrejs/gentoo_rap/var/tmp/portage/dev-java/java-config-2.2.0-r3/image/_python2.7/scratch/mmokrejs/gentoo_rap/etc/java-config-2/build copying config/jdk.conf -> /scratch/mmokrejs/gentoo_rap/var/tmp/portage/dev-java/java-config-2.2.0-r3/image/_python2.7/scratch/mmokrejs/gentoo_rap/etc/java-config-2/build/ copying config/compilers.conf -> /scratch/mmokrejs/gentoo_rap/var/tmp/portage/dev-java/java-config-2.2.0-r3/image/_python2.7/scratch/mmokrejs/gentoo_rap/etc/java-config-2/build/ running install_egg_info Writing /scratch/mmokrejs/gentoo_rap/var/tmp/portage/dev-java/java-config-2.2.0-r3/image/_python2.7/scratch/mmokrejs/gentoo_rap/usr/lib64/python2.7/site-packages/java_config-2.2.0-py2.7.egg-info error: [Errno 2] No such file or directory: '/scratch/mmokrejs/gentoo_rap/var/tmp/portage/dev-java/java-config-2.2.0-r3/image/_python2.7/usr/share/java-config-2/config/' * ERROR: dev-java/java-config-2.2.0-r3::gentoo failed (install phase): * (no error message) * * Call stack: * ebuild.sh, line 115: Called src_install * environment, line 2568: Called distutils-r1_src_install * environment, line 742: Called _distutils-r1_run_foreach_impl 'distutils-r1_python_install' * environment, line 290: Called python_foreach_impl 'distutils-r1_run_phase' 'distutils-r1_python_install' * environment, line 2090: Called multibuild_foreach_variant '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'distutils-r1_python_install' * environment, line 1398: Called _multibuild_run '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'distutils-r1_python_install' * environment, line 1396: Called _python_multibuild_wrapper 'distutils-r1_run_phase' 'distutils-r1_python_install' * environment, line 490: Called distutils-r1_run_phase 'distutils-r1_python_install' * environment, line 711: Called distutils-r1_python_install * environment, line 627: Called esetup.py 'install' '--root=/scratch/mmokrejs/gentoo_rap/var/tmp/portage/dev-java/java-config-2.2.0-r3/image/_python2.7' * environment, line 964: Called die * The specific snippet of code: * "${@}" || die "${die_args[@]}"; * * If you need support, post the output of `emerge --info '=dev-java/java-config-2.2.0-r3::gentoo'`, * the complete build log and the output of `emerge -pqv '=dev-java/java-config-2.2.0-r3::gentoo'`. * The complete build log is located at '/scratch/mmokrejs/gentoo_rap/var/tmp/portage/dev-java/java-config-2.2.0-r3/temp/build.log'. * The ebuild environment file is located at '/scratch/mmokrejs/gentoo_rap/var/tmp/portage/dev-java/java-config-2.2.0-r3/temp/environment'. * Working directory: '/scratch/mmokrejs/gentoo_rap/var/tmp/portage/dev-java/java-config-2.2.0-r3/work/java-config-2.2.0' * S: '/scratch/mmokrejs/gentoo_rap/var/tmp/portage/dev-java/java-config-2.2.0-r3/work/java-config-2.2.0' >>> Failed to emerge dev-java/java-config-2.2.0-r3, Log file: $ emerge -pqv '=dev-java/java-config-2.2.0-r3::gentoo' [ebuild N ] dev-java/java-config-2.2.0-r3 USE="{-test}" PYTHON_TARGETS="python2_7 -python3_3 -python3_4 -python3_5" $ emerge --info '=dev-java/java-config-2.2.0-r3::gentoo' Portage 2.3.0 (python 3.4.4-final-0, prefix/linux-standalone/amd64, gcc-5.4.0, unavailable, 2.6.32-573.12.1.el6.Bull.88.x86_64 x86_64) ================================================================= System Settings ================================================================= System uname: Linux-2.6.32-573.12.1.el6.Bull.88.x86_64-x86_64-Intel-R-_Xeon-R-_CPU_E5-2670_0_@_2.60GHz-with-redhat-6.4-Santiago KiB Mem: 131942764 total, 17350416 free KiB Swap: 65536128 total, 64525608 free Timestamp of repository gentoo: Wed, 29 Jun 2016 00:45:01 +0000 sh bash 4.3_p46 ld GNU ld (Gentoo 2.26) 2.26.20160125 app-shells/bash: 4.3_p46::gentoo dev-lang/perl: 5.24.0-r1::gentoo dev-lang/python: 2.7.11-r2::gentoo, 3.4.4::gentoo dev-util/cmake: 3.5.2-r1::gentoo dev-util/pkgconfig: 0.29.1::gentoo sys-apps/baselayout: 2.2::rap sys-apps/sandbox: 2.10-r2::gentoo sys-devel/autoconf: 2.69-r2::gentoo sys-devel/automake: 1.13.4-r1::gentoo, 1.14.1-r1::gentoo, 1.15-r2::gentoo sys-devel/binutils: 2.26::rap sys-devel/gcc: 5.4.0::gentoo sys-devel/gcc-config: 1.8_p20160608::rap sys-devel/libtool: 2.4.6-r2::gentoo sys-devel/make: 4.2.1::gentoo sys-kernel/linux-headers: 4.6::gentoo (virtual/os-headers) sys-libs/glibc: 2.23-r2::rap Repositories: gentoo location: /scratch/mmokrejs/gentoo_rap/usr/portage sync-type: rsync sync-uri: rsync://rsync.gentoo.org/gentoo-portage priority: -1000 eclass-overrides: rap rap location: /scratch/mmokrejs/gentoo_rap/usr/portage-stage sync-type: git sync-uri: https://anongit.gentoo.org/git/proj/android.git masters: gentoo eclass-overrides: rap science location: /scratch/mmokrejs/gentoo/var/lib/layman/science masters: gentoo priority: 0 eclass-overrides: rap haskell location: /scratch/mmokrejs/gentoo/var/lib/layman/haskell masters: gentoo priority: 1 eclass-overrides: rap x-layman location: /scratch/mmokrejs/gentoo_rap/var/lib/layman masters: gentoo priority: 2 eclass-overrides: rap ACCEPT_KEYWORDS="amd64 ~amd64 ~amd64-linux" ACCEPT_LICENSE="* -@EULA" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-O2 -pipe -O2 -pipe -march=native" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/share/gnupg/qualified.txt" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo" CXXFLAGS="-O2 -pipe -O2 -pipe -march=native" DISTDIR="/scratch/mmokrejs/gentoo_rap/usr/portage/distfiles" FCFLAGS="-O2 -pipe" FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles force-prefix merge-sync news parallel-fetch preserve-libs protect-owned sfperms strict unknown-features-warn unmerge-logs unmerge-orphans unprivileged userfetch userpriv usersync" FFLAGS="-O2 -pipe" GENTOO_MIRRORS="http://gentoo.wheel.sk/ http://ftp.fi.muni.cz/pub/linux/gentoo/ http://gentoo.mirror.web4u.cz/ rsync://gentoo.mirror.dkm.cz/gentoo/ ftp://gentoo.mirror.web4u.cz/" LANG="en_US.UTF-8" LDFLAGS="-Wl,-O1 -Wl,--as-needed" MAKEOPTS="-j8" PKGDIR="/scratch/mmokrejs/gentoo_rap/usr/portage/packages" PORTAGE_CONFIGROOT="/scratch/mmokrejs/gentoo_rap/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git" PORTAGE_TMPDIR="/scratch/mmokrejs/gentoo_rap/var/tmp" USE="acl amd64 berkdb bzip2 cli cracklib crypt cxx dri fortran gdbm iconv ipv6 mmx mmxext modules ncurses nls nptl openmp pcre prefix readline seccomp session sse sse2 ssl tcpd unicode zlib" ABI_X86="64" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="aes avx mmx mmxext popcnt sse sse2 sse3 sse4_1 sse4_2 ssse3" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="keyboard mouse evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-5" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7" RUBY_TARGETS="ruby20 ruby21" USERLAND="GNU" VIDEO_CARDS="amdgpu fbdev intel nouveau radeon radeonsi vesa dummy v4l" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" USE_PYTHON="2.7" Unset: CC, CPPFLAGS, CTARGET, CXX, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS
Created attachment 439148 [details] build.log
This does fail in Gentoo::prefix with profile [prefix/linux-standalone/amd64] installed via bootstrap_rap.sh. The prefix issue is fixed with ebuild and patch at https://bugs.gentoo.org/show_bug.cgi?id=510268 which is in the main Prefix tree http://rsync.prefix.bitzolder.nl/dev-java/java-config/ I believe the java-config-2.2.0-r3.ebuild for profile [prefix/linux-standalone/amd64] is that from the main gentoo tree.
Created attachment 441804 [details, diff] java-config-2.2.0-r3.ebuild.patch This patch works for me, although I think it just avoids the underlying issue (the value passed to --root is wrong): >>> Install java-config-2.2.0-r3 into /scratch/mmokrejs/gentoo_rap/var/tmp/portage/dev-java/java-config-2.2.0-r3/image/ category dev-java * python2_7: running distutils-r1_run_phase python_install /scratch/mmokrejs/gentoo_rap/usr/bin/python2.7 setup.py install --root=/scratch/mmokrejs/gentoo_rap/var/tmp/portage/dev-java/java-config-2.2.0-r3/image/_python2.7 BTW, Gentoo:RAP uses the main Gentoo portage tree, so call it gx86. ;-) Gentoo:Prefix uses it's own tree, but it is not related to this.
I have also encountered the problem error: [Errno 2] No such file or directory: '/var/tmp/portage/portage/dev-java/java-config-2.2.0-r4/image/_python3.6/usr/share/java-config-2/config/'
Still not fixed because (see patch) os.mkdir() can't create multiple directories in one single function call. For me, to compile, I had to change os.mkdir(self.root + eprefix + '/usr/share/java-config-2/config/') for os.mkdir(self.root + eprefix + '/usr/share/') os.mkdir(self.root + eprefix + '/usr/share/java-config-2/') os.mkdir(self.root + eprefix + '/usr/share/java-config-2/config/')
Does this bug persist with dev-java/java-config-2.2.0-r4 ? I don't seem to reproduce it.
Please try again with java-config-2.3.1 and above and report back. Thanks.
