====================================================================== FAIL: test_dlamch (test_cython_lapack.test_lamch) ---------------------------------------------------------------------- Traceback (most recent call last): File "/var/tmp/portage/sci-libs/scipy-0.16.0/work/scipy-0.16.0-python3_4/build/test/lib/scipy/linalg/tests/test_cython_lapack.py", line 16, in test_dlamch lapack.dlamch(c)) File "/usr/lib64/python3.4/site-packages/numpy/testing/utils.py", line 1297, in assert_allclose verbose=verbose, header=header) File "/usr/lib64/python3.4/site-packages/numpy/testing/utils.py", line 665, in assert_array_compare raise AssertionError(msg) AssertionError: Not equal to tolerance rtol=1e-07, atol=0 (mismatch 100.0%) x: array(6.92019130511236e-310) y: array(6.9202139625791e-310) ====================================================================== FAIL: test_decomp_update.TestQRdelete_f.test_delete_last_p_col ---------------------------------------------------------------------- Traceback (most recent call last): File "/usr/lib64/python3.4/site-packages/nose/case.py", line 198, in runTest self.test(*self.arg) File "/var/tmp/portage/sci-libs/scipy-0.16.0/work/scipy-0.16.0-python3_4/build/test/lib/scipy/linalg/tests/test_decomp_update.py", line 328, in test_delete_last_p_col assert_unitary(q1) File "/var/tmp/portage/sci-libs/scipy-0.16.0/work/scipy-0.16.0-python3_4/build/test/lib/scipy/linalg/tests/test_decomp_update.py", line 21, in assert_unitary assert_allclose(aTa, np.eye(a.shape[1]), rtol=rtol, atol=atol) File "/usr/lib64/python3.4/site-packages/numpy/testing/utils.py", line 1297, in assert_allclose verbose=verbose, header=header) File "/usr/lib64/python3.4/site-packages/numpy/testing/utils.py", line 665, in assert_array_compare raise AssertionError(msg) AssertionError: Not equal to tolerance rtol=0.0001, atol=2.38419e-07 (mismatch 100.0%) x: array([[ 9.999999e-01, 1.746230e-08, -1.490116e-08, 1.490116e-08, -6.146729e-08, -6.332994e-08, 3.352761e-08, 7.450581e-08, 3.352761e-08, 2.142042e-08, -4.097819e-08, 4.656613e-08],... y: array([[ 1., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.], [ 0., 1., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.], [ 0., 0., 1., 0., 0., 0., 0., 0., 0., 0., 0., 0.],... ---------------------------------------------------------------------- Ran 18300 tests in 278.741s FAILED (KNOWNFAIL=98, SKIP=1173, failures=2) Running unit tests for scipy NumPy version 1.9.2 NumPy is installed in /usr/lib64/python3.4/site-packages/numpy SciPy version 0.16.0 SciPy is installed in /var/tmp/portage/sci-libs/scipy-0.16.0/work/scipy-0.16.0-python3_4/build/test/lib/scipy Python version 3.4.3 (default, Jul 26 2015, 16:06:13) [GCC 5.2.0] nose version 1.3.7 * ERROR: sci-libs/scipy-0.16.0::gentoo failed (test phase): * Tests fail with python3.4 Portage 2.2.20 (python 2.7.10-final-0, default/linux/amd64/13.0/desktop/kde, gcc-5.2.0, glibc-2.21-r1, 4.1.3-gentoo x86_64) ================================================================= System uname: Linux-4.1.3-gentoo-x86_64-AMD_FX-tm-8350_Eight-Core_Processor-with-gentoo-2.2 KiB Mem: 16406084 total, 897836 free KiB Swap: 8388604 total, 8388444 free sh bash 4.3_p39 ld GNU ld (Gentoo 2.25.1 p1.0) 2.25.1 app-shells/bash: 4.3_p39::gentoo dev-lang/perl: 5.22.0::gentoo dev-lang/python: 2.7.10::gentoo, 3.3.5-r1::gentoo, 3.4.3::gentoo dev-util/cmake: 3.3.0::gentoo dev-util/pkgconfig: 0.28-r3::gentoo sys-apps/baselayout: 2.2::gentoo sys-apps/openrc: 0.17::gentoo sys-apps/sandbox: 2.6-r1::gentoo sys-devel/autoconf: 2.13::gentoo, 2.69-r1::gentoo sys-devel/automake: 1.14.1::gentoo, 1.15::gentoo sys-devel/binutils: 2.25.1::gentoo sys-devel/gcc: 5.2.0::gentoo sys-devel/gcc-config: 1.8::gentoo sys-devel/libtool: 2.4.6-r1::gentoo sys-devel/make: 4.1-r1::gentoo sys-kernel/linux-headers: 4.1::gentoo (virtual/os-headers) sys-libs/glibc: 2.21-r1::gentoo Repositories: gentoo location: /usr/portage sync-type: rsync sync-uri: rsync://rsync.gentoo.org/gentoo-portage priority: -1000 x-sunrise location: /sunrise masters: gentoo priority: 0 ACCEPT_KEYWORDS="amd64 ~amd64" ACCEPT_LICENSE="*" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-O2 -pipe" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/lib64/libreoffice/program/sofficerc /usr/share/config /usr/share/gnupg/qualified.txt" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c" CXXFLAGS="-O2 -pipe" DISTDIR="/usr/portage/distfiles" FCFLAGS="-O2 -pipe" FEATURES="assume-digests binpkg-logs buildpkg config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch preserve-libs protect-owned sandbox sfperms strict test unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr" FFLAGS="-O2 -pipe" GENTOO_MIRRORS="http://mirrors.163.com/gentoo/" LANG="en_US.utf8" LDFLAGS="-Wl,-O1 -Wl,--as-needed" MAKEOPTS="-j3" PKGDIR="/usr/portage/packages" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages" PORTAGE_TMPDIR="/var/tmp" USE="X a52 aac acl acpi alisp alsa amd64 aria assistant berkdb bluetooth branding bzip2 cairo cdda cdr cgi cli compat consolekit corefonts cracklib crypt cups cxx dbus declarative dri dts dvd dvdr emacs emboss encode examples exif fam firefox flac fontconfig fortran gcj gd gdbm geos gif glamor gpm gtk iconv icu ipv6 ithreads jpeg kde kdrive kipi lcms ldap libav libnotify mad minizip mmx mmxext mng modules mp3 mp4 mpeg mssql multilib mysql ncurses nls nptl objc ocaml ogg opengl openmp pam pango pcre pdf perl plasma png policykit ppds pyqt4 python qt3support qt4 readline script sdl semantic-desktop session soundex spell sqlite sse sse2 ssl startup-notification svg tcpd threads tiff tk truetype udev udisks unicode upower usb vorbis x264 xa xattr xcb xcomposite xinerama xml xscreensaver xv xvid zlib" ABI_X86="64" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="mmx mmxext sse sse2" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="keyboard mouse evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-5" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_4" RUBY_TARGETS="ruby20" USERLAND="GNU" VIDEO_CARDS="dummy fbdev glint intel mach64 nouveau nv r128 radeon savage sis trident v4l vesa" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" Unset: CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON
emerge --info scipy and build.log please.
which blas/lapack are you using?
