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Bug 551618 - sci-mathematics/gretl-1.9.90 : libgretl-1.0.so: undefined reference to `dpocon_'
Summary: sci-mathematics/gretl-1.9.90 : libgretl-1.0.so: undefined reference to `dpocon_'
Status: RESOLVED NEEDINFO
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: [OLD] Library (show other bugs)
Hardware: All Linux
: Normal normal (vote)
Assignee: Gentoo Science Mathematics related packages
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2015-06-09 22:51 UTC by Jason Mours
Modified: 2016-03-05 17:37 UTC (History)
0 users

See Also:
Package list:
Runtime testing required: ---


Attachments
build.log (gretl-1.9.90-build.log,208.70 KB, text/plain)
2015-06-09 22:52 UTC, Jason Mours
Details
emerge-info (gretl-1.9.90-emerge.info,17.65 KB, text/plain)
2015-06-09 22:52 UTC, Jason Mours
Details

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Description Jason Mours 2015-06-09 22:51:58 UTC
sci-mathematics/gretl-1.9.90 fails emerge with the following output :

libtool: compile:  gcc -c -march=native -mtune=amdfam10 -Os -pipe -ggdb -I.. -I../gui2 -DHAVE_CONFIG_H -I../lib/src -I/usr/include/libxml2 -I../plugin -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I../plugin/zipunzip -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/include -I. jalpha.c  -fPIC -DPIC -o .libs/jalpha.o
../lib/.libs/libgretl-1.0.so: undefined reference to `dpocon_'
../lib/.libs/libgretl-1.0.so: undefined reference to `dorgqr_'
../lib/.libs/libgretl-1.0.so: undefined reference to `dpotrf_'
../lib/.libs/libgretl-1.0.so: undefined reference to `dgemm_'
../lib/.libs/libgretl-1.0.so: undefined reference to `dpotri_'
../lib/.libs/libgretl-1.0.so: undefined reference to `dpotrs_'
../lib/.libs/libgretl-1.0.so: undefined reference to `dtrcon_'
../lib/.libs/libgretl-1.0.so: undefined reference to `dgetri_'
../lib/.libs/libgretl-1.0.so: undefined reference to `dgglse_'
../lib/.libs/libgretl-1.0.so: undefined reference to `dgeev_'
../lib/.libs/libgretl-1.0.so: undefined reference to `dsycon_'
../lib/.libs/libgretl-1.0.so: undefined reference to `dgetrf_'
../lib/.libs/libgretl-1.0.so: undefined reference to `dsytri_'
../lib/.libs/libgretl-1.0.so: undefined reference to `dgels_'
../lib/.libs/libgretl-1.0.so: undefined reference to `dsytrf_'
../lib/.libs/libgretl-1.0.so: undefined reference to `dgeqrf_'
../lib/.libs/libgretl-1.0.so: undefined reference to `dgelss_'
../lib/.libs/libgretl-1.0.so: undefined reference to `dgesvd_'
../lib/.libs/libgretl-1.0.so: undefined reference to `dsyrk_'
../lib/.libs/libgretl-1.0.so: undefined reference to `dgecon_'
../lib/.libs/libgretl-1.0.so: undefined reference to `dsyev_'
../lib/.libs/libgretl-1.0.so: undefined reference to `dtrtri_'
../lib/.libs/libgretl-1.0.so: undefined reference to `dgetrs_'
../lib/.libs/libgretl-1.0.so: undefined reference to `dpptri_'
../lib/.libs/libgretl-1.0.so: undefined reference to `dpptrf_'
../lib/.libs/libgretl-1.0.so: undefined reference to `dlamch_'
collect2: error: ld returned 1 exit status
libtool: compile:  gcc -c -march=native -mtune=amdfam10 -Os -pipe -ggdb -I.. -I../gui2 -DHAVE_CONFIG_H -I../lib/src -I/usr/include/libxml2 -I../plugin -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I../plugin/zipunzip -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/include -I. range-mean.c  -fPIC -DPIC -o .libs/range-mean.o
Makefile:95: recipe for target 'gretlcli' failed
make[1]: *** [gretlcli] Error 1
make[1]: Leaving directory '/var/tmp/portage/sci-mathematics/gretl-1.9.90/work/gretl-1.9.90/cli'
Makefile:59: recipe for target 'cli' failed
make: *** [cli] Error 2
make: *** Waiting for unfinished jobs....

: Posting build.log
Comment 1 Jason Mours 2015-06-09 22:52:31 UTC
Created attachment 404850 [details]
build.log
Comment 2 Jason Mours 2015-06-09 22:52:57 UTC
Created attachment 404852 [details]
emerge-info
Comment 3 Ted Tanberry 2015-12-27 22:34:19 UTC
in the log, it says:

checking for LAPACK... no
*** Could not run LAPACK test program, checking why...
*** The test program compiled, but did not run. This usually means
*** that the run-time linker is not finding LAPACK. If it is not
*** finding LAPACK, you'll need to set your LD_LIBRARY_PATH 
*** environment variable, or edit /etc/ld.so.conf to point
*** to the installed location.  Also, make sure you have run
*** ldconfig if that is required on your system.
***

which is the culprit. 'dpocon_' is a LAPACK symbol, without which the final executable will never link up. Try running "eselect lapack set reference" and then try emerging again.