Created attachment 404228 [details] output Emerge fail with access denied when building documentation. Very similar to https://github.com/cschwan/sage-on-gentoo/issues/354 The fix maybe is the same? emerge --info Portage 2.2.18 (python 2.7.9-final-0, hardened/linux/x86, gcc-4.8.4, glibc-2.20-r2, 3.16.0-rtai i686) ================================================================= System uname: Linux-3.16.0-rtai-i686-Intel-R-_Pentium-R-_4_CPU_2.80GHz-with-gentoo-2.2 KiB Mem: 2583876 total, 75188 free KiB Swap: 524284 total, 524276 free Timestamp of repository gentoo: Thu, 28 May 2015 13:30:01 +0000 sh bash 4.3_p33-r2 ld GNU gold (Gentoo 2.24 p1.4 2.24) 1.11 distcc 3.1 i686-pc-linux-gnu [disabled] ccache version 3.1.9 [enabled] app-shells/bash: 4.3_p33-r2::gentoo dev-java/java-config: 2.2.0::gentoo dev-lang/perl: 5.20.2::gentoo dev-lang/python: 2.7.9-r1::gentoo, 3.3.5-r1::gentoo, 3.4.1::gentoo dev-util/ccache: 3.1.9-r4::gentoo dev-util/cmake: 2.8.12.2-r1::gentoo dev-util/pkgconfig: 0.28-r2::gentoo sys-apps/baselayout: 2.2::gentoo sys-apps/openrc: 0.13.11::gentoo sys-apps/sandbox: 2.6-r1::gentoo sys-devel/autoconf: 2.69::gentoo sys-devel/automake: 1.11.6-r1::gentoo, 1.13.4::gentoo, 1.14.1::gentoo sys-devel/binutils: 2.24-r3::gentoo sys-devel/gcc: 4.8.4::gentoo sys-devel/gcc-config: 1.7.3::gentoo sys-devel/libtool: 2.4.6::gentoo sys-devel/make: 4.1-r1::gentoo sys-kernel/linux-headers: 3.18::gentoo (virtual/os-headers) sys-libs/glibc: 2.20-r2::gentoo Repositories: gentoo location: /usr/portage sync-type: rsync sync-uri: rsync://rsync.gentoo.org/gentoo-portage priority: -1000 lorelei location: /var/lib/layman/lorelei masters: gentoo priority: 0 aliases: lorelei-overlay octave location: /var/lib/layman/octave masters: gentoo priority: 1 R_Overlay location: /var/lib/layman/R_Overlay masters: gentoo priority: 2 science location: /var/lib/layman/science masters: gentoo priority: 3 sage-on-gentoo location: /var/lib/layman/sage-on-gentoo masters: gentoo priority: 4 GentooCNC location: /usr/local/src/gentoocnc-code/overlay masters: gentoo priority: 5 ACCEPT_KEYWORDS="x86" ACCEPT_LICENSE="* -@EULA" CBUILD="i686-pc-linux-gnu" CFLAGS=" -O2 -march=native -mtune=native -g2 -ggdb2 -fno-omit-frame-pointer" CHOST="i686-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/share/gnupg/qualified.txt" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c" CXXFLAGS=" -O2 -march=native -mtune=native -g2 -ggdb2 -fno-inline -fno-omit-frame-pointer" DISTDIR="/usr/portage/distfiles" FCFLAGS=" -O2 -march=native -tune=native -fplugin=/usr/lib/dragonegg.so -g2 -ggdb2 -fno-omit-frame-pointer" FEATURES="assume-digests binpkg-logs ccache config-protect-if-modified distlocks ebuild-locks fixlafiles installsources merge-sync news parallel-fetch preserve-libs protect-owned sandbox sfperms splitdebug strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr" FFLAGS=" -O2 -march=native -tune=native -fplugin=/usr/lib/dragonegg.so -g2 -ggdb2 -fno-omit-frame-pointer" GENTOO_MIRRORS="ftp://gentoo.imj.fr/pub/gentoo/" LANG="it_IT.utf8" LDFLAGS="-Wl,-O1 -Wl,--as-needed" MAKEOPTS="" PKGDIR="/usr/portage/packages" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages" PORTAGE_TMPDIR="/var/tmp" USE="X a52 aac aacplus aacs aalib acl acpi alsa alsa-plugin amr amrenc animgif apng bash-completion berkdb bindist bluetooth bs2b btrfs bzip2 cairo caps ccache cdda cdio cdrom celt cholmod cli cracklib cron crypt cxx dbus deblob dirac doc dri dts dv dvb dvd encode evdev exif faac ffmpeg flac floppy fortran frei0r fuse gdbm gif glpk gsm hardened hddtemp iconv icu iec61883 ieee1394 ipv6 ipython jack joystick jpeg jpeg2k ladspa lame lapack latex libass libcaca libsoxr llvm lm_sensors maildir matplotlib matroska metis midi mime mmx mng modules mouse mp3 mpeg mpi ncurses nls nptl offensive ogg openal openmp openrc openssl opus pam pax_kernel pcre pic png postgis postgres pulseaudio python qhull quvi readline realtime rtmp schroedinger sdl sensord sensors session sparse speex sse sse2 ssl tcpd theora threaded threads tiff tk twolame unicode unicode3 urandom usb v4l v4l2 vaapi valgrind vdpau video vim vim-pager vim-plugin vim-syntax vorbis vpx wav wavpack webcam webp wifi wmf x264 x265 x86 xattr xpm xtpax xvd xvid zeitgeist zlib" ABI_X86="32" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1 emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="keyboard mouse evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="it en" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-5" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_3" RUBY_TARGETS="ruby19 ruby20" USERLAND="GNU" VIDEO_CARDS="apm ark chips cirrus cyrix dummy fbdev glint i128 i740 intel mach64 mga nsc nv r128 radeon rendition s3 s3virge savage siliconmotion sis sisusb tdfx tga trident tseng v4l vesa via vmware nouveau" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" Unset: CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON
Build finished. The HTML pages are in _build/html. make: Leaving directory '/var/tmp/portage/dev-python/patsy-0.3.0/work/patsy-0.3.0/doc' >>> Source compiled. I can't reproduce this issue
I found this googling around https://archives.gentoo.org/gentoo-dev/message/d7f2ae321510f653cbe20fa762055eec tried in a virtual machine but can't reproduce on it ...
Reproduced in virtual machine: got gentoo from osboxes.org set hardened, my USE flags and rebuilt all this time make sure to use same configuration as mine emerge --info Portage 2.2.20 (python 3.3.5-final-0, hardened/linux/x86, gcc-4.8.4, glibc-2.20-r2, 3.18.9-hardened i686) ================================================================= System uname: Linux-3.18.9-hardened-i686-Intel-R-_Core-TM-_i5_CPU_650_@_3.20GHz-with-gentoo-2.2 KiB Mem: 1032896 total, 909660 free KiB Swap: 0 total, 0 free Timestamp of repository gentoo: Tue, 21 Jul 2015 14:30:02 +0000 sh bash 4.3_p33-r2 ld ld di GNU (Gentoo 2.24 p1.4) 2.24 app-shells/bash: 4.3_p33-r2::gentoo dev-lang/perl: 5.20.2::gentoo dev-lang/python: 2.7.9-r1::gentoo, 3.3.5-r1::gentoo, 3.4.1::gentoo dev-util/cmake: 3.2.2::gentoo dev-util/pkgconfig: 0.28-r2::gentoo sys-apps/baselayout: 2.2::gentoo sys-apps/openrc: 0.17::gentoo sys-apps/sandbox: 2.6-r1::gentoo sys-devel/autoconf: 2.69::gentoo sys-devel/automake: 1.11.6-r1::gentoo, 1.13.4::gentoo, 1.15::gentoo sys-devel/binutils: 2.24-r3::gentoo sys-devel/gcc: 4.8.4::gentoo sys-devel/gcc-config: 1.7.3::gentoo sys-devel/libtool: 2.4.6::gentoo sys-devel/make: 4.1-r1::gentoo sys-kernel/linux-headers: 3.18::gentoo (virtual/os-headers) sys-libs/glibc: 2.20-r2::gentoo Repositories: gentoo location: /usr/portage sync-type: rsync sync-uri: rsync://rsync.gentoo.org/gentoo-portage priority: -1000 ACCEPT_KEYWORDS="x86" ACCEPT_LICENSE="* -@EULA" CBUILD="i686-pc-linux-gnu" CFLAGS="-O2 -march=i686 -pipe" CHOST="i686-pc-linux-gnu" CONFIG_PROTECT="/etc" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c" CXXFLAGS="-O2 -march=i686 -pipe" DISTDIR="/usr/portage/distfiles" FCFLAGS="-march=i686 -O2 -pipe" FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles installsources merge-sync news parallel-fetch preserve-libs protect-owned sandbox sfperms splitdebug strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr" FFLAGS="-march=i686 -O2 -pipe" GENTOO_MIRRORS="http://distfiles.gentoo.org" LANG="it_IT.utf8" LDFLAGS="-Wl,-O1 -Wl,--as-needed" MAKEOPTS="-j2" PKGDIR="/usr/portage/packages" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages" PORTAGE_TMPDIR="/var/tmp" USE="X a52 aac aacplus aacs aalib acl acpi alsa alsa-plugin amr amrenc animgif apng bash-completion berkdb bindist bluetooth bs2b btrfs bzip2 cairo caps ccache cdda cdio cdrom celt cholmod cli cracklib cron crypt cxx dbus deblob dirac doc dri dts dv dvb dvd encode evdev exif faac ffmpeg flac floppy fortran frei0r fuse gd gdbm gif glpk gsm hardened hddtemp iconv icu iec61883 ieee1394 ipv6 ipython jack joystick jpeg jpeg2k ladspa lame lapack latex libass libcaca libsoxr llvm lm_sensors maildir matplotlib matroska metis midi mime mmx mng modules mouse mp3 mpeg mpi ncurses nls nptl offensive ogg openal openmp openrc openssl opus pam pax_kernel pcre pic pie png postgis postgres pulseaudio python qhull quvi readline realtime rtmp schroedinger sdl sensord sensors session sparse speex sqlite sse sse2 ssl ssp tcpd theora threaded threads tiff tk twolame unicode unicode3 urandom usb v4l v4l2 vaapi valgrind vdpau video vim vim-pager vim-plugin vim-syntax vorbis vpx wav wavpack webcam webp wifi wmf x264 x265 x86 xattr xpm xtpax xvd xvid zeitgeist zlib" ABI_X86="32" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1 emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="keyboard mouse evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="it en" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-5" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_3" RUBY_TARGETS="ruby19 ruby20" USERLAND="GNU" VIDEO_CARDS="apm ark chips cirrus cyrix dummy fbdev glint i128 i740 intel mach64 mga nsc nv r128 radeon rendition s3 s3virge savage siliconmotion sis sisusb tdfx tga trident tseng v4l vesa via vmware nouveau" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" Unset: CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON
I rebuilt first without doc use, then built patsy with doc use and I got the same error.
commit 326464432c4855743a99716bc288e8014f6a7b07 Author: Justin Lecher <jlec@gentoo.org> Date: Wed Nov 11 10:25:26 2015 +0100 dev-python/patsy: Clean old obsoletes: Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=546532 Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=550696 Package-Manager: portage-2.2.23 Signed-off-by: Justin Lecher <jlec@gentoo.org> https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=326464432c4855743a99716bc288e8014f6a7b07
