When emerging Ghemical the ./configure script fails because it cannot find sc-config which is supposedly part of the mpqc package. I am also filing a bug repor under mpqc ebuild however the ghemical problem can be resolved by removing he --enable-mpqc from he ./configure script. Reproducible: Always Steps to Reproduce: 1.emerge ghemical 2. 3. Portage 2.0.50-r8 (default-x86-1.4, gcc-3.3.3, glibc-2.3.3.20040420-r0, 2.6.5-gentoo) ================================================================= System uname: 2.6.5-gentoo i686 Intel(R) Pentium(R) 4 CPU 2.53GHz Gentoo Base System version 1.4.16 Autoconf: sys-devel/autoconf-2.59-r4 Automake: sys-devel/automake-1.8.5-r1 ACCEPT_KEYWORDS="x86 ~x86" AUTOCLEAN="yes" CFLAGS="-march=pentium3 -O3 -pipe -fomit-frame-pointer" CHOST="i686-pc-linux-gnu" COMPILER="gcc3" CONFIG_PROTECT="/etc /usr/X11R6/lib/X11/xkb /usr/kde/2/share/config /usr/kde/3.1/share/config /usr/kde/3.2/share/config /usr/kde/3/share/config /usr/lib/mozilla/defaults/pref /usr/share/config /usr/share/texmf/dvipdfm/config/ /usr/share/texmf/dvips/config/ /usr/share/texmf/tex/generic/config/ /usr/share/texmf/tex/platex/config/ /usr/share/texmf/xdvi/ /var/qmail/control" CONFIG_PROTECT_MASK="/etc/gconf /etc/terminfo /etc/env.d" CXXFLAGS="-march=pentium3 -O3 -pipe -fomit-frame-pointer" DISTDIR="/usr/portage/distfiles" FEATURES="autoaddcvs ccache fixpackages sandbox" GENTOO_MIRRORS="ftp://ftp.gtlib.cc.gatech.edu/pub/gentoo ftp://mirrors.tds.net/gentoo ftp://gentoo.netnitco.net/pub/mirrors/gentoo/source/ http://mirrors.tds.net/gentoo http://gentoo.netnitco.net http://ftp.heanet.ie/pub/gentoo/ ftp://ftp.easynet.nl/mirror/gentoo/ http://gentoo.ccccom.com ftp://gentoo.ccccom.com ftp://trumpetti.atm.tut.fi/gentoo/" MAKEOPTS="-j2" PKGDIR="/usr/portage/packages" PORTAGE_TMPDIR="/var/tmp" PORTDIR="/usr/portage" PORTDIR_OVERLAY="/usr/local/portage" SYNC="rsync://rsync.gentoo.org/gentoo-portage" USE="X alsa apm arts avi berkdb cdr crypt cscope cups encode esd foomaticdb freetype gdbm gif gphoto2 gpm gtk2 imap imlib java jpeg kde libg++ libwww mad mikmod mmx motif mozilla mpeg mysql ncurses nls oggvorbis opengl oss pam pdflib png python qt quicktime readline ruby sdl slang spell ssl svga tcltk tcpd tetex truetype x86 xinerama xml2 xmms xv zlib"
Run this: qpkg -l mpqc | grep sc-config If you don't have qpkg, emerge gentoolkit.
I works for me. Have you tried reemerging mpqc ?
I'm closing this bug due to lack of feed-back.
Hi, I'd like to reopen this bug (and I'm willing to give feedback.) I have the same sc-config problem. I have tried to re-emerge mpqc, but that din't work. I've also tried the instructions from a forum-thread: http://forums.gentoo.org/viewtopic.php?t=189698 but that didn't help either. It apaers that mpqc has only installed some man-pages. molmod08 mpqc # qpkg -l mpqc app-sci/mpqc-2.2.2 * CONTENTS: /usr /usr/share /usr/share/man /usr/share/man/man3 /usr/share/man/man3/sc_ShmMemoryGrp.3.gz /usr/share/man/man3/sc_SCVectorSimpleBlock.3.gz /usr/share/man/man3/sc_VDWShape.3.gz /usr/share/man/man3/sc_ARMCIMemoryGrp.3.gz /usr/share/man/man3/group.3.gz ... I'v checked the configure output of mpqc and it says that there is no fortran compiler installed on my system. Afaik, gcc can serve as fortran compiler, so I don't understand why this warning: checking for g77... no checking for f77... no checking for xlf... no checking for frt... no checking for pgf77... no checking for fort77... no checking for fl32... no checking for af77... no checking for f90... no checking for xlf90... no checking for pgf90... no checking for epcf90... no checking for f95... no checking for fort... no checking for xlf95... no checking for ifc... no checking for efc... no checking for pgf95... no checking for lf95... no checking for gfortran... no checking whether we are using the GNU Fortran 77 compiler... no checking whether accepts -g... no checking how to get verbose linking output from ... configure: WARNING: compilation failed checking for Fortran libraries of ...
Newer gcc versions build g77 only if you have "f77" in your USE flags (which is off by default, and you can't yet state in your DEPENDs that you need a gcc with g77). Someone will have to add a check to the mpqc package. Re-Opening until this is done, changing summary.
I had same problem. but I could resolved this problem to reemerge the gcc with f77 use flag,lapack and mpqc. but I found the next. The die command is not written in the part of src_compile() and src_install() of the mpqc-2.2.2.ebuild and mpqc-2.2.2-r1.ebuild. So, even if abort the compile or make install, emerge recognize that mpqc is successfully installed. Please add the die command.
Committed changes as per comment #6. Waiting for fortran.eclass to be ready before adding the f77 check.
Is this fixed in 2.2.2-r1?
I think the dependency on lapack-reference should be fixed too: checking for sys/shm.h... yes checking for SYSV IPC... yes checking if semctl requires semun... no checking fortran symbols... lowercase with underscore checking for daxpy_... no checking for daxpy_ in -lessl... no checking for daxpy_ in -lblas... yes checking for dgesvd_... no checking for dgesvd_ in -llapack... no Could not link to the LAPACK library. It can be obtained at http://www.netlib.org/lapack. Use --with-libdir and/or --with-libs to specify the name of the library. configure: error: LAPACK is required to complete the build !!! ERROR: sci-chemistry/mpqc-2.2.2-r1 failed. !!! Function src_compile, Line 27, Exitcode 1 !!! configure failed !!! If you need support, post the topmost build error, NOT this status message. # emerge -s lapack Searching... [ Results for search key : lapack ] [ Applications found : 4 ] * sci-libs/lapack Latest version available: 3.0 Latest version installed: 3.0 Size of downloaded files: 4,874 kB Homepage: http://www.netlib.org/lapack/ Description: Linear Algebra PACKage for scientists, engineers, and mathematicians. This contains the libraries for creating programs that use LAPACK. License: lapack * sci-libs/lapack-atlas Latest version available: 3.6.0 Latest version installed: 3.6.0 Size of downloaded files: 6,587 kB Homepage: http://math-atlas.sourceforge.net/ Description: Full LAPACK implementation using available ATLAS routines License: BSD * sci-libs/lapack-config Latest version available: 1.0.1 Latest version installed: 1.0.1 Size of downloaded files: 0 kB Homepage: http://www.gentoo.org/ Description: Utility to change the default LAPACK library License: GPL-2 * sci-libs/lapack-reference Latest version available: 3.0 Latest version installed: [ Not Installed ] Size of downloaded files: 4,934 kB Homepage: http://www.netlib.org/lapack/index.html Description: FORTRAN reference implementation of LAPACK Linear Algebra PACKage License: lapack Portage 2.0.51-r15 (default-linux/x86/2004.0, gcc-3.3.4, glibc-2.3.4.20050125-r0, 2.4.30-pre1-bk4 i686) ================================================================= System uname: 2.4.30-pre1-bk4 i686 Intel(R) Xeon(TM) CPU 3.06GHz Gentoo Base System version 1.6.9 Python: dev-lang/python-2.3.4-r1 [2.3.4 (#1, Feb 16 2005, 23:25:25)] dev-lang/python: 2.3.4-r1 sys-devel/autoconf: 2.59-r6, 2.13 sys-devel/automake: 1.6.3, 1.7.9-r1, 1.5, 1.4_p6, 1.8.5-r3, 1.9.4 sys-devel/binutils: 2.15.92.0.2-r2 sys-devel/libtool: 1.5.10-r4 virtual/os-headers: 2.4.22-r1 ACCEPT_KEYWORDS="x86 ~x86" AUTOCLEAN="yes" CFLAGS="-march=pentium4 -mcpu=pentium4 -mmmx -msse -msse2 -msse3 -O3 -fomit-frame-pointer -funroll-loops -pipe" CHOST="i686-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/kde/2/share/config /usr/kde/3/share/config /usr/lib/X11/xkb /usr/share/config /usr/share/texmf/dvipdfm/config/ /usr/share/texmf/dvips/config/ /usr/share/texmf/tex/generic/config/ /usr/share/texmf/tex/platex/config/ /usr/share/texmf/xdvi/ /var/bind /var/qmail/alias /var/qmail/control" CONFIG_PROTECT_MASK="/etc/gconf /etc/terminfo /etc/env.d" CXXFLAGS="-march=pentium4 -mcpu=pentium4 -mmmx -msse -msse2 -msse3 -O3 -fomit-frame-pointer -funroll-loops -pipe" DISTDIR="/usr/portage/distfiles" FEATURES="autoaddcvs autoconfig ccache distlocks sandbox sfperms" GENTOO_MIRRORS="ftp://ftp.muni.cz/pub/linux/gentoo/ http://gentoo.mirror.icd.hu/ http://ftp-stud.fht-esslingen.de/pub/Mirrors/gentoo/ http://gd.tuwien.ac.at/opsys/linux/gentoo/ ftp://ftp.tu-clausthal.de/pub/linux/gentoo/" MAKEOPTS="-j2" PKGDIR="/usr/portage/packages" PORTAGE_TMPDIR="/var/tmp" PORTDIR="/usr/portage" SYNC="rsync://rsync.gentoo.org/gentoo-portage" USE="x86 FFmpeg X Xaw3d aalib acpi afs alsa apache2 apm arts ati avi berkdb bidi bitmap-fonts caca cdparanoia cdr crypt cscope cups curl dga directfb divx divx4 divx4linux divx5 divx5linux doc dvb dvd dvdr dvdread emacs emacs-w3 encode esd ethereal evo f77 faad faad2 fam fame fbcon ffmpeg flac flash font-server foomaticdb fortran fvwm fvwm2 g77 gb gcj gd gdbm ggi gif gphoto2 gpm gstreamer gtk gtk2 gtkhtml guile i8x0 icc imagemagick imlib imlib2 innodb ipv6 java jpeg junit lcms leim libg++ libwww live lzo mad mcal mesa mikmod mmx mmx2 motif mozilla mpeg mule mysql ncurses network nls oggvorbis opengl oss pam pda pdflib perl php php4 plotutils png postgres ppds pthread pthreads python qt qtx quicktime readline rtc samba sasl scanner sdl slang slp spell sse sse2 sse3 ssl svga tcltk tcpd tetex theora thread threads tiff truetype truetype-fonts type1-fonts unicode usb v4l v4l2 win32 winvidix wmf xml xml2 xmms xosd xv xvid xvmc zeo zlib video_cards_radeon" Unset: ASFLAGS, CBUILD, CTARGET, LANG, LC_ALL, LDFLAGS, PORTDIR_OVERLAY
1. That's completely unrelated and should have been filed as a new bug. 2. It depends on the virtuals in >=2.2.2-r1 -- lapack and blas are deprecated so don't provide the virtuals. Just lapack-* and blas-*. The stable mpqc can't depend on the virtuals because the virtuals are only provided by unstable packages.
Should be fixed in >=2.2.2-r1
