540004 – sci-geosciences/grass-6.4.2 - In function ‘void* operator new [](size_t)’: mm.cc:259:32: error: declaration of ‘void* operator new [](size_t)’ has a different exception specifier

Bug 540004 - sci-geosciences/grass-6.4.2 - In function ‘void* operator new [](size_t)’: mm.cc:259:32: error: declaration of ‘void* operator new [](size_t)’ has a different exception specifier

Summary: sci-geosciences/grass-6.4.2 - In function ‘void* operator new [](size_t)’: mm...

Status:	RESOLVED OBSOLETE

Alias:	None

Product:	Gentoo Linux
Classification:	Unclassified
Component:	Current packages (show other bugs)
Hardware:	All Linux

Importance:	Normal normal (vote)
Assignee:	Sam Jorna (wraeth)

URL:
Whiteboard:
Keywords:

Depends on:
Blocks:

Reported:	2015-02-13 18:50 UTC by Juergen Rose
Modified:	2015-10-19 11:24 UTC (History)
CC List:	3 users (show)

See Also:
Package list:
Runtime testing required:	---

Attachments
build.log.bz2 (build.log.bz2,153.84 KB, application/x-bzip) 2015-02-13 18:54 UTC, Juergen Rose	Details
View All Add an attachment (proposed patch, testcase, etc.)

Note You need to log in before you can comment on or make changes to this bug.

Description Juergen Rose 2015-02-13 18:50:57 UTC

'MAKEOPTS=-j1 emerge -v1 grass' fails with:
...
Generating HTML manual pages index (help system)...
Generated HTML docs in ../dist.x86_64-pc-linux-gnu/docs/html/index.html
----------------------------------------------------------------------
Following modules are missing the 'description.html' file in src code:
----------------------------------------------------------------------
GRASS GIS compilation log
-------------------------
Started compilation: Fri Feb 13 19:31:01 CET 2015
--
Errors in:
/var/tmp/portage/sci-geosciences/grass-6.4.2/work/grass-6.4.2/lib/iostream
/var/tmp/portage/sci-geosciences/grass-6.4.2/work/grass-6.4.2/raster/r.terraflow
--
In case of errors please change into the directory with error and run 'make'.
If you get multiple errors, you need to deal with them in the order they
appear in the error log. If you get an error building a library, you will
also get errors from anything which uses the library.
--
Finished compilation: Fri Feb 13 19:40:00 CET 2015
Makefile:84: recipe for target 'default' failed
make: *** [default] Error 1



root@lynx:/usr/local/portage/sci-geosciences(19)# emerge --info '=sci-geosciences/grass-6.4.2::gentoo'
Portage 2.2.17 (python 2.7.9-final-0, default/linux/amd64/13.0/desktop, gcc-4.9.2, glibc-2.20-r1, 3.19.0-gentoo x86_64)
=================================================================
                         System Settings
=================================================================
System uname: Linux-3.19.0-gentoo-x86_64-Intel-R-_Core-TM-2_Duo_CPU_T9500_@_2.60GHz-with-gentoo-2.2
KiB Mem:     8100304 total,   1911712 free
KiB Swap:   12582908 total,  12492372 free
Timestamp of repository gentoo: Fri, 13 Feb 2015 15:30:01 +0000
sh bash 4.3_p33-r1
ld GNU ld (Gentoo 2.24 p1.4) 2.24
distcc[15316] (dcc_trace_version) distcc 3.2rc1 x86_64-pc-linux-gnu; built Jan  2 2015 07:30:34 [disabled]
app-shells/bash:          4.3_p33-r1::gentoo
dev-java/java-config:     2.2.0::gentoo
dev-lang/perl:            5.20.1-r4::gentoo
dev-lang/python:          2.7.9-r2::gentoo, 3.3.5-r1::gentoo, 3.4.2::gentoo
dev-util/cmake:           3.1.0::gentoo
dev-util/pkgconfig:       0.28-r2::gentoo
sys-apps/baselayout:      2.2::gentoo
sys-apps/openrc:          0.13.9::gentoo
sys-apps/sandbox:         2.6-r1::gentoo
sys-devel/autoconf:       2.13::gentoo, 2.69::gentoo
sys-devel/automake:       1.9.6-r4::gentoo, 1.10.3-r1::gentoo, 1.11.6-r1::gentoo, 1.12.6::gentoo, 1.14.1::gentoo, 1.15::gentoo
sys-devel/binutils:       2.24-r3::gentoo
sys-devel/gcc:            4.9.2::gentoo
sys-devel/gcc-config:     1.8::gentoo
sys-devel/libtool:        2.4.5::gentoo
sys-devel/make:           4.1-r1::gentoo
sys-kernel/linux-headers: 3.19::gentoo (virtual/os-headers)
sys-libs/glibc:           2.20-r1::gentoo
Repositories:

gentoo
    location: /usr/portage_lynx
    sync-type: rsync
    sync-uri: rsync://rsync.gentoo.org/gentoo-portage
    priority: -1000

sage-on-gentoo
    location: /var/lib/layman/sage-on-gentoo
    masters: gentoo
    priority: 0

science
    location: /var/lib/layman/science
    masters: gentoo
    priority: 1

sunrise
    location: /var/lib/layman/sunrise
    masters: gentoo
    priority: 2

x11
    location: /var/lib/layman/x11
    masters: gentoo
    priority: 3

ago
    location: /var/lib/layman/ago
    masters: gentoo
    priority: 4

tlp
    location: /var/lib/layman/tlp
    masters: gentoo
    priority: 5

local
    location: /usr/local/portage
    masters: gentoo
    priority: 6

g-cpan
    location: /var/lib/cpan
    masters: gentoo
    priority: 7

g-octave
    location: /var/lib/g-octave
    masters: gentoo
    priority: 8

Installed sets: @system
ACCEPT_KEYWORDS="amd64 ~amd64"
ACCEPT_LICENSE="* -@EULA PUEL Intel-SDP dlj-1.1 skype-eula skype-4.0.0.7-copyright googleearth AdobeFlash-11.x cadsoft Oracle-BCLA-JavaSE MakeMKV-EULA NVIDIA-CUDA Nero-AAC-EULA GIMPS"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=native -O2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/lib64/libreoffice/program/sofficerc /usr/share/config /usr/share/gnupg/qualified.txt /var/lib/hsqldb"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php5.6/ext-active/ /etc/php/cgi-php5.6/ext-active/ /etc/php/cli-php5.6/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c"
CXXFLAGS="-march=native -O2 -pipe"
DISTDIR="/usr/portage/distfiles"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-march=native -O2 -pipe"
GENTOO_MIRRORS="http://linux.rz.ruhr-uni-bochum.de/download/gentoo-mirror http://ftp-stud.fht-esslingen.de/pub/Mirrors/gentoo/ ftp://ftp.wh2.tu-dresden.de/pub/mirrors/gentoo ftp://sunsite.informatik.rwth-aachen.de/pub/Linux/gentoo ftp://ftp.tu-clausthal.de/pub/linux/gentoo ftp://ftp.easynet.nl/mirror/gentoo/ "
LANG="en_US.UTF-8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j3"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
USE="64bit R X Xaw3d a52 aac acl acpi admin afs alsa amd64 ao apache2 apng applet archive armadillo arpack asf aspell atlas audacious audiofile automap automount bash-completion berkdb blas blast bluetooth bluray boost branding bzip2 cairo cdda cddb cdf cdio cdparanoia cdr cg cgi chm cli cmake consolekit cracklib crypt css cups curl cxx daap db dbi dbm dbus declarative designer devhelp device-mapper dga dia dirac djvu doc dot dri ds2490 ds9097 ds9097u dts dv dvb dvd dvdr dvi dynamicplugin eds egl elf emacs emboss emf encode epiphany evo examples exif expat extensions extra extras faac faad fam ffmpeg fftw firefox fits flac fltk fontconfig foomaticdb fortran fortran95 fpm fpx fuse g3dvl garmin gcj gd gdal gdbm gdu gedit geoip geolocation geos gfortran gif gimp git glade glamor glib glpk gml gmp gnome gnome-keyring gnome-print gnuplot gnutls gold gphoto2 gpm grammar graphics graphtft graphviz grass gsl gsm gstreamer gtk gtk3 gudev guile hdaps hddtemp hdf hdf5 hdri html http httpd hvm hwdb iconv icq icu id3tag ide imagemagick imap inotify introspection ipod ipv6 irda ithreads jabber jadetex java java6 jbig jit john jpeg jpeg2k kate kde kdepim kdrive kerberos keymap kpathsea kvm ladspa lame lapack laptop latex lcms ldap lensfun libffi libkms libnotify libsamplerate lirc live lua lzma lzo mad mail maildir mapnik math matroska media-library mercurial mikmod mkl mmx mmxext mng mod modules mono motif mozilla mp3 mp4 mpeg mpi mplayer mtp multilib multimedia musepack musicbrainz mysql mysqli nautilus ncurses neXt netcdf netpbm network networking nfs nls nntp nptl nsplugin ntfs ntp numpy obex objc ocaml ocr octave odbc ofa ogdi ogg openexr opengl openmp openvg pam pango pcre pda pdf pdl2 perl plasma plotutils plugins png podcast policykit portaudio posix postgres postscript ppds preview-latex proj projectm pstricks pulseaudio python python-bindings q16 q32 qemu qhull qt3support qt4 quicktime raw readline reiserfs reports rle romio rpc rrdcgi rrdtool sage samba sasl schroedinger science sdk sdl secure-delete semantic-desktop server session shout sip slang slp smart smbclient smp sms sndfile snmp soap sockets sound soup sox speex spell sql sqlite sse sse2 sse4 sse4_1 ssl ssse3 startup-notification stlport subtitles subversion sudo suexec svg svm swig systemd szip t1lib tcl tcpd tex tex4ht texmacs theora thesaurus thinkpad threads thunderbird tidy tiff tk tools truetype udev udisks unicode upower usb utempter v4l vaapi vala valgrind vdpau video virt-network virtualbox visio vorbis vpx vtk wav webdav webdav-serf webkit wifi wmf wxwidgets x264 xa xattr xcb xetex xext xft xine xml xmlreader xmlrpc xpm xv xvid xvmc yaml youtube zlib zvbi" ABI_X86="64" ALSA_CARDS="intel8x0" APACHE2_MODULES="actions alias auth_basic auth_digest authn_anon authn_dbd authn_core authn_dbm authn_default authn_file authz_core authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgid dav dav_fs dav_lock dbd deflate dir disk_cache env expires ext_filter file_cache filter headers ident imagemap include info lbmethod_byrequests log_config logio mem_cache mime mime_magic negotiation proxy proxy_ajp proxy_balancer proxy_connect proxy_http rewrite setenvif slotmem_shm so socache_shmcb speling status unique_id unixd userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="canon fuji ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog sensors thermal" CPU_FLAGS_X86="mmx mmxext sse sse2 sse3 sse4_1 ssse3" CURL_SSL="nss" DRACUT_MODULES="caps lvm syslog" DVB_CARDS="usb-wt220u" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="keyboard mouse evdev synaptics void" KERNEL="linux" LCD_DEVICES="cfontz hd44780 mtxorb ncurses X lcd2usb lcdlinux png usblcd" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="de fr ru" NETBEANS_MODULES="apisupport cnd dlight enterprise ergonomics groovy gsf harness ide identity j2ee java mobility nb php profiler websvccommon xml" OFFICE_IMPLEMENTATION="libreoffice" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_3" QEMU_SOFTMMU_TARGETS="arm i386 x86_64" QEMU_USER_TARGETS="arm i386 x86_64" RUBY_TARGETS="ruby19 ruby20" USERLAND="GNU" VIDEO_CARDS="nouveau displaylink" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON



root@lynx:/usr/local/portage/sci-geosciences(20)# emerge -pqv '=sci-geosciences/grass-6.4.2::gentoo'
[ebuild   R   ] sci-geosciences/grass-6.4.2 [6.4.2] USE="X cairo cxx ffmpeg fftw jpeg mysql nls odbc opengl png postgres python readline sqlite tiff truetype wxwidgets -debug -gmath -motif"

Comment 1 Juergen Rose 2015-02-13 18:54:03 UTC

Created attachment 396406 [details]
build.log.bz2

Comment 2 bschnzl 2015-02-18 02:07:23 UTC

Virtual QGIS web server...

 ~ # emerge -pqv '=sci-geosciences/grass-6.4.2::gentoo'
[ebuild  N    ] sci-geosciences/grass-6.4.2  USE="cxx jpeg nls png readline tiff -X -cairo -debug -ffmpeg -fftw -gmath -motif -mysql -odbc -opengl -postgres -python -sqlite -truetype -wxwidgets"

 ~ # emerge --info '=sci-geosciences/grass-6.4.2::gentoo'
Portage 2.2.14 (python 2.7.9-final-0, default/linux/amd64/13.0, gcc-4.7.3, glibc-2.19-r1, 3.12.13-gentoo x86_64)
=================================================================
                         System Settings
=================================================================
System uname: Linux-3.12.13-gentoo-x86_64-Intel-R-_Xeon-R-_CPU_L5410_@_2.33GHz-with-gentoo-2.2
KiB Mem:     4102376 total,   1258872 free
KiB Swap:    8388604 total,   8387796 free
Timestamp of tree: Mon, 16 Feb 2015 03:45:01 +0000
ld GNU ld (Gentoo 2.24 p1.4) 2.24
app-shells/bash:          4.2_p53
dev-lang/perl:            5.20.1-r4
dev-lang/python:          2.7.9-r1, 3.3.5-r1
dev-util/cmake:           2.8.12.2
dev-util/pkgconfig:       0.28-r1
sys-apps/baselayout:      2.2
sys-apps/openrc:          0.13.9
sys-apps/sandbox:         2.6-r1
sys-devel/autoconf:       2.13, 2.69
sys-devel/automake:       1.13.4
sys-devel/binutils:       2.24-r3
sys-devel/gcc:            4.7.3-r1, 4.8.3
sys-devel/gcc-config:     1.7.3
sys-devel/libtool:        2.4.4
sys-devel/make:           4.0-r1
sys-kernel/linux-headers: 3.16 (virtual/os-headers)
sys-libs/glibc:           2.19-r1
Repositories: gentoo
ACCEPT_KEYWORDS="amd64"
ACCEPT_LICENSE="* -@EULA"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-O2 -march=core2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php5.5/ext-active/ /etc/php/cgi-php5.5/ext-active/ /etc/php/cli-php5.5/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo"
CXXFLAGS="-O2 -march=core2 -pipe"
DISTDIR="/usr/portage/distfiles"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-O2 -pipe"
GENTOO_MIRRORS="http://gentoo.mirrors.tds.net/gentoo http://mirror.lug.udel.edu/pub/gentoo/ http://mirror.datapipe.net/gentoo http://mirror.csclub.uwaterloo.ca/gentoo-distfiles/ http://gentoo.netnitco.net"
LANG="en_US"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j4"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
PORTDIR_OVERLAY=""
SYNC="rsync://192.168.5.45/gentoo-portage"
USE="acl acpi amd64 bash-completion bcmath berkdb bindist bzip2 calendar caps cli cracklib crypt curl curlwrappers cxx fam fastcgi flatfile fortran gd gdbm geoip gif gnuplot gnutls gpm gzip iconv introspection iodbc ipv6 jpeg jpeg2k libav libwww lzma lzo mmx mmxext mng modules multilib mysqli ncurses nls nptl offensive openmp pam pcre pdf perl php plotutils png readline sasl session smp sse sse2 sse4_1 ssl ssse3 syslog tcpd threads tiff tokenizer unicode vhosts webkit xattr xmlrpc zlib" ABI_X86="64" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="mmx sse sse2" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="keyboard mouse evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" PHP_TARGETS="php5-5" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_3" RUBY_TARGETS="ruby19 ruby20" USERLAND="GNU" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON

Comment 3 Sam Jorna (wraeth) gentoo-dev

2015-10-19 11:24:03 UTC

Closing as OBSOLETE - sci-geosciences/grass-7.0.1 has been added to the tree as per bug 514514 and subsequently revbumped. Note that sci-geosciences/grass:6 has been masked and will be removed from the tree in the coming weeks.