Bug 537056 – app-misc/subsurface-4.2 - ain.cpp:45:19: Kerror: git_threads_init was not declared in this scope git_threads_init(); Makefile:1001: recipe for target '.obj/main.o' failed

• Status: RESOLVED FIXED
• Product: Gentoo Linux

[Description Toralf Förster 2015-01-19 15:09:16 UTC]

compiling divelist.c
compiling equipment.c
compiling file.c
compiling gettextfromc.cpp
compiling libdivecomputer.c
compiling load-git.c
compiling main.cpp
[01m[Kmain.cpp:[m[K In function ‘[01m[Kint main(int, char**)[m[K’:
[01m[Kmain.cpp:45:19:[m[K [01;31m[Kerror: [m[K‘[01m[Kgit_threads_init[m[K’ was not declared in this scope
  git_threads_init();
[01;32m[K                   ^[m[K
Makefile:1001: recipe for target '.obj/main.o' failed
make: *** [.obj/main.o] Error 1
 * ERROR: app-misc/subsurface-4.2::gentoo failed (compile phase):
 *   emake failed
 * 
 * If you need support, post the output of `emerge --info '=app-misc/subsurface-4.2::gentoo'`,
 * the complete build log and the output of `emerge -pqv '=app-misc/subsurface-4.2::gentoo'`.
 * The complete build log is located at '/var/log/portage/app-misc:subsurface-4.2:20150119-090901.log'.
 * For convenience, a symlink to the build log is located at '/var/tmp/portage/app-misc/subsurface-4.2/temp/build.log'.
 * The ebuild environment file is located at '/var/tmp/portage/app-misc/subsurface-4.2/temp/environment'.
 * Working directory: '/var/tmp/portage/app-misc/subsurface-4.2/work/subsurface-4.2'
 * S: '/var/tmp/portage/app-misc/subsurface-4.2/work/subsurface-4.2'

 * GNU info directory index is up-to-date.

 * IMPORTANT: 2 config files in '/etc' need updating.
 * See the CONFIGURATION FILES section of the emerge
 * man page to learn how to update config files.


! ! !  This is a build bot chroot located at a hardened amd64 host ! ! !

Portage 2.2.15 (python 3.3.5-final-0, hardened/linux/amd64, gcc-4.9.2, glibc-2.20-r1, 3.18.2-hardened-r1 x86_64)
=================================================================
                         System Settings
=================================================================
System uname: Linux-3.18.2-hardened-r1-x86_64-Intel-R-_Core-TM-_i7-3770_CPU_@_3.40GHz-with-gentoo-2.2
KiB Mem:    16166860 total,   1647980 free
KiB Swap:   16777212 total,  16751040 free
Timestamp of tree: Mon, 19 Jan 2015 06:15:01 +0000
sh bash 4.3_p33
ld GNU ld (Gentoo 2.24 p1.4) 2.24
app-shells/bash:          4.3_p33
dev-java/java-config:     2.2.0
dev-lang/perl:            5.20.1-r4
dev-lang/python:          2.7.9-r1, 3.3.5-r1, 3.4.2
dev-util/cmake:           3.1.0
dev-util/pkgconfig:       0.28-r2
sys-apps/baselayout:      2.2
sys-apps/openrc:          0.13.7
sys-apps/sandbox:         2.6-r1
sys-devel/autoconf:       2.69
sys-devel/automake:       1.11.6-r1, 1.13.4, 1.15
sys-devel/binutils:       2.24-r3
sys-devel/gcc:            4.8.4, 4.9.2
sys-devel/gcc-config:     1.8
sys-devel/libtool:        2.4.4
sys-devel/make:           4.1-r1
sys-kernel/linux-headers: 3.18 (virtual/os-headers)
sys-libs/glibc:           2.20-r1
Repositories: gentoo
ACCEPT_KEYWORDS="amd64 ~amd64"
ACCEPT_LICENSE="*"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-O2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/share/config /usr/share/gnupg/qualified.txt /var/lib/hsqldb"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c"
CXXFLAGS="-O2 -pipe"
DISTDIR="/usr/portage/distfiles"
EMERGE_DEFAULT_OPTS="--nospinner --tree --quiet-build --deep --jobs 1"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-O2 -pipe"
GENTOO_MIRRORS="http://mirror.leaseweb.com/gentoo/ http://ftp.uni-erlangen.de/pub/mirrors/gentoo http://ftp-stud.hs-esslingen.de/pub/Mirrors/gentoo/ http://gd.tuwien.ac.at/opsys/linux/gentoo/"
LANG="en_US.utf8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j1"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
PORTDIR_OVERLAY=""
SYNC="rsync://rsync.de.gentoo.org/gentoo-portage"
USE="X acl aes-ni alsa amd64 apache2 avx avx2 berkdb bzip2 cli corefonts cracklib crypt cups cxx dbus dnssec dri drmkms dvd ecc ffmpeg fontconfig fortran fpm gdbm git gtk gudev gui hardened iconv isag jpeg justify libvirtd logrotate macvtap mbox minizip mmx modules multilib mysql ncurses nls nptl ogg opengl openmp pam pax_kernel pcre plasma png policykit qemu qt3support qt4 readline session spice sse sse2 sse4 sse4_1 sse4_2 ssh-askpass ssl ssse3 tcpd theora thinkpad threads tk tls truetype uml unicode urandom usb usbredir uxa v4l v4l2 vaapi video vorbis xa xattr xmp xscreensaver xtpax xvfb xvmc zenmap zlib" ABI_X86="64" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="keyboard mouse evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-5" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_3" RUBY_TARGETS="ruby19  ruby20" USERLAND="GNU" VIDEO_CARDS="fbdev glint intel mach64 mga nouveau nv r128 radeon savage sis tdfx trident vesa via vmware dummy v4l" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CPPFLAGS, CTARGET, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON


 build log is stored in /var/log/portage/_emerge_20150119-100915.log

[Comment 1 Charles Nérot 2015-01-20 07:42:07 UTC]

app-misc/subsurface-4.2 emerge is *ok* whith (stable) dev-libs/libgit2-0.20.0-r1 and (~amd64) dev-libs/libgit2-0.21.3(0/21) but *not ok* with (~amd64) dev-libs/libgit2-0.22.0(0/22)

more info :
save-git.c: In function ‘new_directory’:
save-git.c:434:2: attention : implicit declaration of function ‘git_treebuilder_create’ [-Wimplicit-function-declaration]
  git_treebuilder_create(&subdir->files, NULL);
  ^
save-git.c: In function ‘write_git_tree’:
save-git.c:1013:38: attention : passing argument 2 of ‘git_treebuilder_write’ from incompatible pointer type
  ret = git_treebuilder_write(result, repo, tree->files);
                                      ^
In file included from /usr/include/git2/diff.h:13:0,
                 from /usr/include/git2/checkout.h:12,
                 from /usr/include/git2.h:17,
                 from save-git.c:11:
/usr/include/git2/tree.h:375:17: note: expected ‘struct git_treebuilder *’ but argument is of type ‘struct git_repository *’
 GIT_EXTERN(int) git_treebuilder_write(
                 ^
save-git.c:1013:8: erreur: too many arguments to function ‘git_treebuilder_write’
  ret = git_treebuilder_write(result, repo, tree->files);
        ^
In file included from /usr/include/git2/diff.h:13:0,
                 from /usr/include/git2/checkout.h:12,
                 from /usr/include/git2.h:17,
                 from save-git.c:11:
/usr/include/git2/tree.h:375:17: note: declared here
 GIT_EXTERN(int) git_treebuilder_write(
                 ^
Makefile:1426 : la recette pour la cible « .obj/save-git.o » a échouée

[Comment 2 Martin Gysel (bearsh) 2015-01-22 21:26:26 UTC]

for the time being please use the latest ebuild from my overlay [1] which includes up-to-date versions of subsurface (which also includes a patch which solves this compile error (run time functionality has not been tested)) and libdivecomputer

[1] https://bitbucket.org/bearsh/bearshlay

[Comment 3 zamabe 2015-10-23 01:39:54 UTC]

I've had this issue as well.

app-misc/subsurface-4.2 isn't compatible with >=dev-libs/libgit2-0.22.0 due to libgit2 API changes.

My solution was to change the ebuild to depend on dev-libs/libgit2:0/21

--- /subsurface-4.2.ebuild
+++ /subsurface-4.2.ebuild
@@ -32,7 +32,7 @@
 RDEPEND="dev-db/sqlite:3
 	dev-libs/glib:2
 	>=dev-libs/libdivecomputer-${LIBDC_V}[usb?]
-	dev-libs/libgit2:=
+	dev-libs/libgit2:0/21
 	dev-libs/libxml2
 	dev-libs/libxslt
 	dev-libs/libzip

[Comment 4 Ian Delaney (RETIRED) 2015-10-23 10:49:45 UTC]

(In reply to zamabe from comment #3)
> I've had this issue as well.
> 
> app-misc/subsurface-4.2 isn't compatible with >=dev-libs/libgit2-0.22.0 due
> to libgit2 API changes.
> 



The maintainer b-man is now a dev. He shall be either removed or made the main maintainer of the package.  zamabe do you wish to become a new second co-maintainer?

[Comment 5 zamabe 2015-10-23 13:50:24 UTC]

No, thank you. I stumbled on this solution by luck.

[Comment 6 Ian Delaney (RETIRED) 2015-10-24 02:26:11 UTC]

commit bb2b2e13ad800e974b3921675c13d65f112987c5
Author: Ian Delaney <[e-mail]>
Date:   Sat Oct 24 10:23:05 2015 +0800

    app-misc/subsurface: reset slot/sub-slot to dep dev-libs/libgit2
    
    ack to 'zamabe' for submission of the patch via the gentoo bug
    Re-set maintainer b-man to dev status in metadata
    
    Gentoo bug: #537056