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Bug 530870 - gnome-extra/zeitgeist-0.9.14-r1 - zeitgeist-datah reports segfault in libglib-2.0.so.0.4002.0
Summary: gnome-extra/zeitgeist-0.9.14-r1 - zeitgeist-datah reports segfault in libgli...
Status: RESOLVED OBSOLETE
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: [OLD] GNOME (show other bugs)
Hardware: All Linux
: Normal normal (vote)
Assignee: Justin Lecher (RETIRED)
URL:
Whiteboard:
Keywords:
Depends on: 560024
Blocks:
  Show dependency tree
 
Reported: 2014-11-27 14:55 UTC by Juergen Rose
Modified: 2015-09-20 10:16 UTC (History)
2 users (show)

See Also:
Package list:
Runtime testing required: ---


Attachments

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Description Juergen Rose 2014-11-27 14:55:29 UTC
'dmesg' shows:
...
[  773.846050] mount.nfs (26085) used greatest stack depth: 11200 bytes left
[  821.115120] zeitgeist-datah[27618]: segfault at 8 ip 00007f88a022d940 sp 00007fff34017d10 error 4 in libglib-2.0.so.0.4002.0[7f88a01a2000+134000]
[ 2246.674626] nouveau E[  PGRAPH][0000:01:00.0] TRAP ch 5 [0x003fb74000 gnome-shell[27218]]


'journalctl -xb' says:
...
Nov 27 14:09:52 impala gnome-session[26999]: (gnome-settings-daemon:27189): rfkill-plugin-WARNING **: Failed to acquire NetworkManager proxy: Fehler beim Aufruf von StartServiceByName für org.freedesktop.NetworkManager: GDBus.Error:org.freedesktop.systemd1.LoadFailed: Unit dbus-org.freedesktop.NetworkManager.service failed to load: No such file or directory.
Nov 27 14:09:52 impala colord[26745]: Profile added: icc-7d1357920eda23d60994a4f4696d8db6
Nov 27 14:09:52 impala colord[26745]: Profile added: icc-3a828f08f9d89a78f5d65df26d88018f
Nov 27 14:09:52 impala geoclue[27219]: (geoclue:27219): GLib-GObject-WARNING **: invalid (NULL) pointer instance
Nov 27 14:09:52 impala geoclue[27219]: (geoclue:27219): GLib-GObject-CRITICAL **: g_signal_connect_data: assertion 'G_TYPE_CHECK_INSTANCE (instance)' failed
Nov 27 14:09:52 impala polkitd[26308]: Registered Authentication Agent for unix-session:2 (system bus name :1.44 [/usr/bin/gnome-shell], object path /org/freedesktop/PolicyKit1/AuthenticationAgent, locale de_DE.UTF-8)
Nov 27 14:09:52 impala org.gnome.evolution.dataserver.Sources3[27154]: Migrating mail accounts from GConf...
Nov 27 14:09:53 impala org.gnome.evolution.dataserver.Sources3[27154]: Migrating addressbook sources from GConf...
Nov 27 14:09:53 impala org.gnome.evolution.dataserver.Sources3[27154]: Migrating calendar sources from GConf...
Nov 27 14:09:53 impala org.gnome.evolution.dataserver.Sources3[27154]: Migrating task list sources from GConf...
Nov 27 14:09:53 impala org.gnome.evolution.dataserver.Sources3[27154]: Migrating memo list sources from GConf...
Nov 27 14:09:54 impala gnome-session[26999]: Gjs-Message: JS LOG: No permission to trigger offline updates: Polkit.Error: GDBus.Error:org.freedesktop.PolicyKit1.Error.Failed: Action org.freedesktop.packagekit.trigger-offline-update is not registered
Nov 27 14:09:54 impala gnome-session[26999]: Gjs-Message: JS LOG: GNOME Shell started at Thu Nov 27 2014 14:09:54 GMT+0100 (CET)
Nov 27 14:09:55 impala gnome-session[26999]: Entering running state
Nov 27 14:09:55 impala org.gnome.OnlineAccounts[27154]: goa-daemon-Message: goa-daemon version 3.12.4 starting
Nov 27 14:09:56 impala org.gnome.evolution.dataserver.Sources3[27154]: Bus name 'org.gnome.evolution.dataserver.Sources3' acquired.
Nov 27 14:09:56 impala gnome-session[26999]: (zeitgeist-datahub:27618): GLib-GObject-WARNING **: invalid (NULL) pointer instance
Nov 27 14:09:56 impala gnome-session[26999]: (zeitgeist-datahub:27618): GLib-GObject-CRITICAL **: g_signal_connect_data: assertion 'G_TYPE_CHECK_INSTANCE (instance)' failed
Nov 27 14:09:56 impala org.gnome.zeitgeist.Engine[27154]: ** (zeitgeist-datahub:27645): WARNING **: zeitgeist-datahub.vala:226: Unable to get name "org.gnome.zeitgeist.datahub" on the bus!
Nov 27 14:09:57 impala gnome-session[26999]: ** (zeitgeist-datahub:27618): WARNING **: recent-manager-provider.vala:132: Desktop file for "file:///home/rose/E_T_VC_r_T.png" was not found, exec: soffice, mime_type: image/png
Nov 27 14:09:57 impala gnome-session[26999]: ** (zeitgeist-datahub:27618): WARNING **: recent-manager-provider.vala:132: Desktop file for "file:///home_impala/rose/E_T_VC_R_T.png" was not found, exec: soffice, mime_type: image/png
Nov 27 14:09:57 impala gnome-session[26999]: ** (zeitgeist-datahub:27618): WARNING **: recent-manager-provider.vala:132: Desktop file for "file:///home_impala/rose/S_T_VC_R.png" was not found, exec: soffice, mime_type: image/png
Nov 27 14:09:57 impala gnome-session[26999]: ** (zeitgeist-datahub:27618): WARNING **: recent-manager-provider.vala:132: Desktop file for "file:///home_impala/rose/S_T_VC.png" was not found, exec: soffice, mime_type: image/png
Nov 27 14:09:57 impala gnome-session[26999]: ** (zeitgeist-datahub:27618): WARNING **: recent-manager-provider.vala:132: Desktop file for "file:///home_impala/rose/V_T_VC.png" was not found, exec: soffice, mime_type: image/png
Nov 27 14:09:57 impala gnome-session[26999]: ** (zeitgeist-datahub:27618): WARNING **: recent-manager-provider.vala:132: Desktop file for "file:///home_impala/rose/A_VC_T.png" was not found, exec: soffice, mime_type: image/png
Nov 27 14:09:57 impala gnome-session[26999]: (zeitgeist-datahub:27618): GLib-CRITICAL **: g_variant_builder_add_value: assertion '!GVSB(builder)->prev_item_type || g_variant_is_of_type (value, GVSB(builder)->prev_item_type)' failed
Nov 27 14:09:57 impala gnome-session[26999]: (zeitgeist-datahub:27618): GLib-CRITICAL **: g_variant_builder_add_value: assertion '!GVSB(builder)->prev_item_type || g_variant_is_of_type (value, GVSB(builder)->prev_item_type)' failed
Nov 27 14:09:57 impala kernel: zeitgeist-datah[27618]: segfault at 8 ip 00007f88a022d940 sp 00007fff34017d10 error 4 in libglib-2.0.so.0.4002.0[7f88a01a2000+134000]
Nov 27 14:09:57 impala gnome-session[26999]: (zeitgeist-datahub:27618): GLib-CRITICAL **: g_variant_builder_add_value: assertion '!GVSB(builder)->prev_item_type || g_variant_is_of_type (value, GVSB(builder)->prev_item_type)' failed
Nov 27 14:09:57 impala gnome-session[26999]: (zeitgeist-datahub:27618): GLib-CRITICAL **: g_variant_builder_add_value: assertion '!GVSB(builder)->prev_item_type || g_variant_is_of_type (value, GVSB(builder)->prev_item_type)' failed
Nov 27 14:09:57 impala gnome-session[26999]: (zeitgeist-datahub:27618): GLib-CRITICAL **: g_variant_builder_add_value: assertion '!GVSB(builder)->prev_item_type || g_variant_is_of_type (value, GVSB(builder)->prev_item_type)' failed
Nov 27 14:09:57 impala gnome-session[26999]: (zeitgeist-datahub:27618): GLib-CRITICAL **: g_variant_builder_add_value: assertion '!GVSB(builder)->prev_item_type || g_variant_is_of_type (value, GVSB(builder)->prev_item_type)' failed
Nov 27 14:09:57 impala gnome-session[26999]: (zeitgeist-datahub:27618): GLib-CRITICAL **: g_variant_builder_add_value: assertion '!GVSB(builder)->prev_item_type || g_variant_is_of_type (value, GVSB(builder)->prev_item_type)' failed
Nov 27 14:09:57 impala gnome-session[26999]: (uint32 1,)





root@impala:/root(14)# emerge --info  =gnome-extra/zeitgeist-0.9.14-r1
Portage 2.2.14 (python 2.7.8-final-0, default/linux/amd64/13.0, gcc-4.8.3, glibc-2.20, 3.17.4-gentoo x86_64)
=================================================================
                         System Settings
=================================================================
System uname: Linux-3.17.4-gentoo-x86_64-AMD_Phenom-tm-_II_X4_965_Processor-with-gentoo-2.2
KiB Mem:     8164216 total,    190952 free
KiB Swap:   50331640 total,  50329300 free
Timestamp of tree: Thu, 27 Nov 2014 13:00:01 +0000
ld GNU ld (GNU Binutils) 2.24
app-shells/bash:          4.3_p30-r1
dev-java/java-config:     2.2.0
dev-lang/perl:            5.20.1-r2
dev-lang/python:          2.7.8, 3.3.5-r1, 3.4.2
dev-util/cmake:           3.0.2
dev-util/pkgconfig:       0.28-r2
sys-apps/baselayout:      2.2
sys-apps/openrc:          0.13.6
sys-apps/sandbox:         2.6-r1
sys-devel/autoconf:       2.13, 2.69
sys-devel/automake:       1.10.3-r1, 1.11.6-r1, 1.12.6, 1.14.1
sys-devel/binutils:       2.24-r3
sys-devel/gcc:            4.8.3
sys-devel/gcc-config:     1.8
sys-devel/libtool:        2.4.3-r2
sys-devel/make:           4.1-r1
sys-kernel/linux-headers: 3.17-r1 (virtual/os-headers)
sys-libs/glibc:           2.20
Repositories: gentoo science sunrise sage-on-gentoo x11 x-portage g-cpan g-octave
ACCEPT_KEYWORDS="amd64 ~amd64"
ACCEPT_LICENSE="* -@EULA PUEL Intel-SDP dlj-1.1 skype-eula skype-4.0.0.7-copyright googleearth AdobeFlash-11.x cadsoft Oracle-BCLA-JavaSE MakeMKV-EULA NVIDIA-CUDA Nero-AAC-EULA GIMPS"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=amdfam10 -O2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/share/config /usr/share/gnupg/qualified.txt /var/lib/hsqldb"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php5.6/ext-active/ /etc/php/cgi-php5.6/ext-active/ /etc/php/cli-php5.6/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c"
CXXFLAGS="-march=amdfam10 -O2 -pipe"
DISTDIR="/usr/portage/distfiles"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-O2 -pipe"
GENTOO_MIRRORS="http://distfiles.gentoo.org"
LANG="en_US.UTF-8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j5"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage_impala"
PORTDIR_OVERLAY="/var/lib/layman/science /var/lib/layman/sunrise /var/lib/layman/sage-on-gentoo /var/lib/layman/x11 /usr/local/portage /var/lib/cpan /var/lib/g-octave"
USE="3dnow 3dnowext 64bit R X Xaw3d a52 aac accessibility acl acpi admin afs alsa amd64 ao apache2 apng applet archive armadillo arpack asf aspell atlas audacious audiofile automap automount bash-completion berkdb blas blast bluetooth bluray boost bzip2 cairo cdda cddb cdf cdio cdparanoia cdr cg cgi chm cli cmake cracklib crypt css cups curl cxx daap db dbi dbm dbus declarative designer devhelp device-mapper dga dia dirac djvu doc dot dri ds2490 ds9097 ds9097u dts dv dvb dvd dvdr dvi dynamicplugin eds egl elf emacs emboss emf encode epiphany evo examples exif expat extensions extra extras faac faad fam ffmpeg fftw firefox fits flac fltk fontconfig foomaticdb fortran fortran95 fpm fpx fuse g3dvl gcj gd gdal gdbm gdu gedit geoip geolocation geos gfortran gif gimp git glade glib glpk gml gmp gnome gnome-keyring gnome-print gnuplot gnutls gold gphoto2 gpm grammar graphics graphtft graphviz grass gsl gsm gstreamer gtk gtk3 gudev guile hddtemp hdf hdf5 hdri html http httpd hvm hwdb iconv icq icu id3tag ide imagemagick imap inotify introspection ipod ipv6 ithreads jabber jadetex java java6 jbig jit john jpeg jpeg2k kate kde kdepim kdrive kerberos keymap kpathsea kvm ladspa lame lapack latex lcms ldap lensfun libffi libkms libnotify libsamplerate live lm_sensors lua lzma lzo mad mail maildir mapnik math matroska media-library mercurial mikmod mkl mmx mmxext mng mod modules mono motif mozilla mp3 mp4 mpeg mpi mplayer mtp multilib multimedia musepack musicbrainz mysql mysqli nautilus ncurses netcdf netpbm network networking nfs nls nntp nptl nsplugin ntfs ntp numpy obex objc ocaml ocr octave odbc ofa ogdi ogg openexr opengl openmp openvg pam pango pcre pda pdf pdl2 perl plasma plotutils plugins png podcast policykit portaudio posix postgres postscript ppds preview-latex proj projectm pstricks pulseaudio python python-bindings q16 q32 qemu qhull qt3support qt4 quicktime raw readline reiserfs reports rle romio rpc rrdcgi rrdtool sage samba sasl schroedinger science sdk sdl secure-delete semantic-desktop server session shout sip slang slp smart smbclient smp sms sndfile snmp soap sockets sound soup sox speex spell sql sqlite sse sse2 sse4 sse4a ssl stlport subtitles subversion sudo suexec svg svm swig systemd szip t1lib tcl tcpd tex tex4ht texmacs theora thesaurus threads thunderbird tidy tiff tk tools truetype udev udisks unicode usb utempter v4l vaapi vala valgrind vdpau video virt-network virtualbox visio vorbis vpx vtk wav webdav webdav-serf webkit wmf wxwidgets x264 xa xattr xcb xetex xext xft xine xml xmlreader xmlrpc xpm xv xvid xvmc yaml youtube zlib zvbi" ABI_X86="64" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="actions alias auth_basic auth_digest authn_anon authn_dbd authn_core authn_dbm authn_default authn_file authz_core authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgid dav dav_fs dav_lock dbd deflate dir disk_cache env expires ext_filter file_cache filter headers ident imagemap include info lbmethod_byrequests log_config logio mem_cache mime mime_magic negotiation proxy proxy_ajp proxy_balancer proxy_connect proxy_http rewrite setenvif slotmem_shm so socache_shmcb speling status unique_id unixd userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="canon fuji ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CURL_SSL="nss" DRACUT_MODULES="caps lvm mdraid syslog" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="keyboard mouse evdev void" KERNEL="linux" LCD_DEVICES="cfontz hd44780 mtxorb ncurses X lcd2usb lcdlinux png usblcd" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="de fr ru" NETBEANS_MODULES="apisupport cnd dlight enterprise ergonomics groovy gsf harness ide identity j2ee java mobility nb php profiler websvccommon xml" OFFICE_IMPLEMENTATION="libreoffice" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_3" QEMU_SOFTMMU_TARGETS="arm i386 x86_64" QEMU_USER_TARGETS="arm i386 x86_64" RUBY_TARGETS="ruby19 ruby20" USERLAND="GNU" VIDEO_CARDS="nouveau displaylink" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, SYNC, USE_PYTHON

=================================================================
                        Package Settings
=================================================================

gnome-extra/zeitgeist-0.9.14-r1 was built with the following:
USE="datahub downloads-monitor extensions fts icu introspection nls plugins -sql-debug -telepathy" ABI_X86="64" PYTHON_TARGETS="python2_7"
Comment 1 Pacho Ramos gentoo-dev 2014-11-28 13:25:34 UTC
A backtrace would be useful for maintainer:
https://wiki.gentoo.org/wiki/Project:Quality_Assurance/Backtraces

Thanks
Comment 2 Justin Lecher (RETIRED) gentoo-dev 2014-11-28 13:48:41 UTC
OOM?
Comment 3 Juergen Rose 2014-11-28 14:11:30 UTC
(In reply to Pacho Ramos from comment #1)
> A backtrace would be useful for maintainer:
> https://wiki.gentoo.org/wiki/Project:Quality_Assurance/Backtraces
> 
> Thanks

How can I get a backtrace in this situation. I can can compile zeitgeist with debug flags. But I have no idea how zeitgeist is started and how I should run zeitgeist through the debugger.
Comment 4 Juergen Rose 2014-11-28 14:14:47 UTC
(In reply to Justin Lecher from comment #2)
> OOM?

You mean out of memory? It is a system with 8 GB RAM.
Comment 5 Justin Lecher (RETIRED) gentoo-dev 2014-11-28 14:15:42 UTC
(In reply to Juergen Rose from comment #4)
> (In reply to Justin Lecher from comment #2)
> > OOM?
> 
> You mean out of memory? It is a system with 8 GB RAM.

I have seen OOM with 24GB lately. But I am still figuring out when and why it happens.
Comment 6 Justin Lecher (RETIRED) gentoo-dev 2015-07-27 18:15:13 UTC
How about version 0.9.16?
Comment 7 Juergen Rose 2015-08-04 06:31:45 UTC
After installing zeitgeist-0.9.16 the situation seems to be improved:

root@impala:/usr/src(303)# journalctl -xb | grep -U2 zeitgeist
Jul 13 07:06:35 impala audit: PROCTITLE proctitle="(t-daemon)"
Jul 13 07:06:35 impala rtkit-daemon[20505]: Canary thread running.
Jul 13 07:06:36 impala org.gnome.zeitgeist.Engine[20411]: ** (zeitgeist-datahub:20496): WARNING **: zeitgeist-datahub.vala:226: Unable to get name "org.gnome.zeitgeist.datahub" on the bus!
Jul 13 07:06:36 impala rtkit-daemon[20505]: Successfully made thread 20487 of process 20487 (/usr/bin/pulseaudio) owned by '1203' high priority at nice level -11.
Jul 13 07:06:36 impala rtkit-daemon[20505]: Supervising 1 threads of 1 processes of 1 users.
--
Aug 01 18:10:17 impala automount[18859]: expire_cleanup: sigchld: exp 139710564767488 finished, switching from 2 to 1
Aug 01 18:10:17 impala automount[18859]: st_ready: st_ready(): state = 2 path /misc
Aug 01 18:10:23 impala org.gnome.zeitgeist.SimpleIndexer[20411]: ** (zeitgeist-fts:20494): WARNING **: Unable to get info on application://showfoto.desktop
Aug 01 18:10:45 impala automount[18859]: st_expire: state 1 path /net
Aug 01 18:10:45 impala automount[18859]: expire_proc: exp_proc = 139710564767488 path /net
root@impala:/usr/src(304)# genlop -t zeitgeist | tail

     Mon Sep 15 17:23:52 2014 >>> gnome-extra/zeitgeist-0.9.14-r1
       merge time: 1 minute and 24 seconds.

     Wed Mar  4 07:43:21 2015 >>> gnome-extra/zeitgeist-0.9.15
       merge time: 1 minute and 14 seconds.

     Tue Jul 28 15:27:42 2015 >>> gnome-extra/zeitgeist-0.9.16
       merge time: 1 minute and 4 seconds.
Comment 8 Justin Lecher (RETIRED) gentoo-dev 2015-09-20 10:16:21 UTC
commit 68891e7bc8ff3a23d725232b89e4c1e1f5807d76
Author: Justin Lecher <jlec@gentoo.org>
Date:   Sun Sep 20 12:15:44 2015 +0200

    gnome-extra/zeitgeist: Clean old

    obsoletes
    Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=530870

    Package-Manager: portage-2.2.20.1
    Signed-off-by: Justin Lecher <jlec@gentoo.org>

    https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=68891e7bc8ff3a23d725232b89e4c1e1f5807d76