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Bug 529382 - sci-libs/plplot-5.10.0-r1 - error: /usr/lib64/octave/3.8.2/oct/x86_64-pc-linux-gnu/PKG_ADD: /usr/lib64/octave/3.8.2/oct/x86_64-pc-linux-gnu/__init_fltk__.oct: failed to load: /usr/lib64/fltk/libfltk_gl.so.1.3: undefined symbol: _ZN18Fl_XFont_On_Demand5val
Summary: sci-libs/plplot-5.10.0-r1 - error: /usr/lib64/octave/3.8.2/oct/x86_64-pc-linu...
Status: RESOLVED FIXED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: [OLD] Library (show other bugs)
Hardware: All Linux
: Normal normal (vote)
Assignee: Gentoo Science Related Packages
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2014-11-15 20:46 UTC by Juergen Rose
Modified: 2017-02-18 19:11 UTC (History)
0 users

See Also:
Package list:
Runtime testing required: ---


Attachments
/var/tmp/portage/sci-libs/plplot-5.10.0-r1/work/plplot-5.10.0_build/CMakeFiles/CMakeOutput.log (CMakeOutput.log,102.71 KB, text/plain)
2014-11-15 20:46 UTC, Juergen Rose
Details
/var/tmp/portage/sci-libs/plplot-5.10.0-r1/work/plplot-5.10.0_build/CMakeFiles/CMakeError.log (CMakeError.log,15.75 KB, text/plain)
2014-11-15 20:48 UTC, Juergen Rose
Details
build.log (build.log,28.13 KB, text/plain)
2014-11-17 16:59 UTC, Juergen Rose
Details

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Description Juergen Rose 2014-11-15 20:46:58 UTC
Created attachment 389448 [details]
/var/tmp/portage/sci-libs/plplot-5.10.0-r1/work/plplot-5.10.0_build/CMakeFiles/CMakeOutput.log

'emerge plplot' fails with:
...
-- <<< Gentoo configuration >>>
Build type      Gentoo
Install path    /usr
Compiler flags:
C               -march=native -O2 -pipe -fomit-frame-pointer 
C++             -march=native -O2 -pipe -fomit-frame-pointer 
Linker flags:
Executable       -Wl,-O1 -Wl,--as-needed
Module           -Wl,-O1 -Wl,--as-needed
Shared           -Wl,-O1 -Wl,--as-needed

-- Configuring incomplete, errors occurred!
See also "/var/tmp/portage/sci-libs/plplot-5.10.0-r1/work/plplot-5.10.0_build/CMakeFiles/CMakeOutput.log".
See also "/var/tmp/portage/sci-libs/plplot-5.10.0-r1/work/plplot-5.10.0_build/CMakeFiles/CMakeError.log".
 * ERROR: sci-libs/plplot-5.10.0-r1::gentoo failed (configure phase):
 *   cmake failed




root@lynx2:/root(66)# emerge --info '=sci-libs/plplot-5.10.0-r1::gentoo'
Portage 2.2.14 (python 2.7.8-final-0, default/linux/amd64/13.0/desktop/gnome/systemd, gcc-4.8.3, glibc-2.20, 3.17.2-gentoo x86_64)
=================================================================
                         System Settings
=================================================================
System uname: Linux-3.17.2-gentoo-x86_64-Intel-R-_Core-TM-2_Duo_CPU_T7500_@_2.20GHz-with-gentoo-2.2
KiB Mem:     3972512 total,    298944 free
KiB Swap:   12582908 total,  10733108 free
Timestamp of tree: Sat, 15 Nov 2014 03:30:01 +0000
ld GNU ld (GNU Binutils) 2.24
app-shells/bash:          4.3_p30-r1
dev-java/java-config:     2.2.0
dev-lang/perl:            5.20.1-r2
dev-lang/python:          2.7.8, 3.3.5-r1, 3.4.2
dev-util/cmake:           3.0.2
dev-util/pkgconfig:       0.28-r2
sys-apps/baselayout:      2.2
sys-apps/openrc:          0.13.4
sys-apps/sandbox:         2.6-r1
sys-devel/autoconf:       2.13, 2.69
sys-devel/automake:       1.9.6-r3, 1.10.3, 1.11.6, 1.12.6, 1.14.1
sys-devel/binutils:       2.24-r3
sys-devel/gcc:            4.8.3
sys-devel/gcc-config:     1.8
sys-devel/libtool:        2.4.3-r2
sys-devel/make:           4.1-r1
sys-kernel/linux-headers: 3.17-r1 (virtual/os-headers)
sys-libs/glibc:           2.20
Repositories: gentoo sunrise x11 sage-on-gentoo science tlp x-portage g-cpan g-octave
ACCEPT_KEYWORDS="amd64 ~amd64"
ACCEPT_LICENSE="* -@EULA PUEL Intel-SDP dlj-1.1 skype-eula skype-4.0.0.7-copyright googleearth AdobeFlash-11.x cadsoft Oracle-BCLA-JavaSE MakeMKV-EULA NVIDIA-CUDA Nero-AAC-EULA GIMPS"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=native -O2 -pipe -fomit-frame-pointer"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/kde/3.5/env /usr/kde/3.5/share/config /usr/kde/3.5/shutdown /usr/share/config /usr/share/gnupg/qualified.txt /var/lib/hsqldb"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php5.6/ext-active/ /etc/php/apache2-php5/ext-active/ /etc/php/cgi-php5.6/ext-active/ /etc/php/cgi-php5/ext-active/ /etc/php/cli-php5.6/ext-active/ /etc/php/cli-php5/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c /etc/udev/rules.d"
CXXFLAGS="-march=native -O2 -pipe -fomit-frame-pointer"
DISTDIR="/usr/portage/distfiles"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-march=native -O2 -pipe -fomit-frame-pointer"
GENTOO_MIRRORS="http://distfiles.gentoo.org"
LANG="en_US.UTF-8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j3"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage_lynx2"
PORTDIR_OVERLAY="/var/lib/layman/sunrise /var/lib/layman/x11 /var/lib/layman/sage-on-gentoo /var/lib/layman/science /var/lib/layman/tlp /usr/local/portage /var/lib/cpan /var/lib/g-octave"
USE="64bit R X Xaw3d a52 aac acl acpi admin afs alsa amd64 ao apache2 apng applet archive armadillo arpack asf aspell atlas audacious audiofile automap automount bash-completion berkdb blas blast bluetooth bluray boost branding bzip2 cairo cdda cddb cdf cdio cdparanoia cdr cgi chm cli cmake colord cracklib crypt css cups curl cxx daap db dbi dbm dbus declarative designer devhelp device-mapper dga dia dirac djvu doc dot dri ds2490 ds9097 ds9097u dts dv dvb dvd dvdr dvi dynamicplugin eds egl elf emacs emboss emf encode epiphany evo examples exif expat extensions extra extras faac faad fam ffmpeg fftw firefox fits flac fltk fontconfig foomaticdb fortran fortran95 fpm fpx fuse g3dvl garmin gcj gd gdal gdbm gdu gedit geoip geolocation geos gfortran gif gimp git glade glamor glib glpk gml gmp gnome gnome-keyring gnome-online-accounts gnome-print gnuplot gnutls gold gphoto2 gpm grammar graphics graphtft graphviz grass gsl gsm gstreamer gtk gtk3 gudev guile hdaps hddtemp hdf hdf5 hdri html http httpd hvm hwdb iconv icq icu id3tag ide imagemagick imap inotify introspection ipod ipv6 irda ithreads jabber jadetex java jbig jit john jpeg jpeg2k kate kde kdepim kdrive kerberos keymap kpathsea kvm ladspa lame lapack laptop latex lcms ldap lensfun libffi libkms libnotify libsamplerate libsecret lirc live lua lzma lzo mad mail maildir mapnik math matroska media-library mercurial mikmod mkl mmx mmxext mng mod modules mono motif mozilla mp3 mp4 mpeg mpi mplayer mtp multilib multimedia musepack musicbrainz mysql mysqli nautilus ncurses netcdf netpbm network networking nfs nls nntp nptl nsplugin ntfs ntp numpy obex objc ocaml ocr octave odbc ofa ogdi ogg openexr opengl openmp openvg pam pango pcre pda pdf pdl2 perl plasma plotutils plugins png podcast policykit portaudio posix postgres postscript ppds preview-latex proj projectm pstricks pulseaudio python python-bindings q32 qemu qhull qt3support qt4 quicktime raw readline reiserfs reports rle romio rpc rrdcgi rrdtool sage samba sasl schroedinger science sdk sdl secure-delete semantic-desktop server session shout sip slang slp smart smbclient smp sms sndfile snmp soap socialweb sockets sound soup sox speex spell sql sqlite sse sse2 ssl ssse3 startup-notification stlport subtitles subversion sudo suexec svg svm swig systemd szip t1lib tcl tcpd tex tex4ht texmacs theora thesaurus thinkpad threads thunderbird tidy tiff tk tools truetype udev udisks unicode upower usb utempter v4l vaapi vala valgrind vdpau video virt-network virtualbox visio vorbis vpx vtk wav webdav webdav-serf webkit wifi wmf wxwidgets x264 xa xattr xcb xetex xext xft xine xml xmlreader xmlrpc xpm xv xvid xvmc yaml youtube zlib zvbi" ABI_X86="64" ALSA_CARDS="intel8x0" APACHE2_MODULES="actions alias auth_basic auth_digest authn_anon authn_dbd authn_core authn_dbm authn_default authn_file authz_core authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgid dav dav_fs dav_lock dbd deflate dir disk_cache env expires ext_filter file_cache filter headers ident imagemap include info lbmethod_byrequests log_config logio mem_cache mime mime_magic negotiation proxy proxy_ajp proxy_balancer proxy_connect proxy_http rewrite setenvif slotmem_shm so socache_shmcb speling status unique_id unixd userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="canon fuji ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CURL_SSL="nss" DVB_CARDS="usb-wt220u" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="keyboard mouse evdev synaptics void" KERNEL="linux" LCD_DEVICES="cfontz hd44780 mtxorb ncurses X lcd2usb lcdlinux png usblcd" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="de fr ru" NETBEANS_MODULES="apisupport cnd dlight enterprise ergonomics groovy gsf harness ide identity j2ee java mobility nb php profiler websvccommon xml" OFFICE_IMPLEMENTATION="libreoffice" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_3" QEMU_SOFTMMU_TARGETS="arm i386 x86_64" QEMU_USER_TARGETS="arm i386 x86_64" RUBY_TARGETS="ruby19 ruby20" USERLAND="GNU" VIDEO_CARDS="intel displaylink" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, SYNC, USE_PYTHON




root@lynx2:/root(67)# emerge -pqv '=sci-libs/plplot-5.10.0-r1::gentoo'
[ebuild  N    ] sci-libs/plplot-5.10.0-r1  USE="X cairo cxx dynamic examples fortran gd java jpeg latex lua ocaml octave pdf pdl png python qhull qt4 svg tcl threads tk truetype wxwidgets -ada -doc -shapefile {-test}" PYTHON_TARGETS="python2_7"
Comment 1 Juergen Rose 2014-11-15 20:48:29 UTC
Created attachment 389450 [details]
/var/tmp/portage/sci-libs/plplot-5.10.0-r1/work/plplot-5.10.0_build/CMakeFiles/CMakeError.log
Comment 2 Jeroen Roovers (RETIRED) gentoo-dev 2014-11-17 12:46:22 UTC
Please attach the entire build log to this bug report.
Comment 3 Juergen Rose 2014-11-17 16:59:53 UTC
Created attachment 389580 [details]
build.log
Comment 4 David Seifert gentoo-dev 2017-02-18 19:11:03 UTC
Reopen if the latest bump does not fix it.

commit 51fd4fb2277b7117039a9572f242dd39ffd322cb
Author: David Seifert <soap@gentoo.org>
Date:   Sat Feb 18 20:09:44 2017 +0100

    sci-libs/plplot: Version bump to 5.12.0
    
    Bug: https://bugs.gentoo.org/show_bug.cgi?id=529382
    Bug: https://bugs.gentoo.org/show_bug.cgi?id=554156
    Bug: https://bugs.gentoo.org/show_bug.cgi?id=585114