Could you please remove ":=" from sci-libs/cbflib-0.9.3.3 ebuild hdf5 RDEPEND? It is blocking for me upgrade to hdf5-1.8.13 Reproducible: Always Portage 2.2.14 (python 2.7.8-final-0, default/linux/amd64/13.0/desktop, gcc-4.9.3-alpha20141101, glibc-2.19-r1, 3.17.2-gentoo x86_64) ================================================================= System uname: Linux-3.17.2-gentoo-x86_64-Intel-R-_Core-TM-2_Quad_CPU_Q9550_@_2.83GHz-with-gentoo-2.2 KiB Mem: 8169836 total, 2859960 free KiB Swap: 8396796 total, 8396796 free Timestamp of tree: Thu, 06 Nov 2014 17:00:01 +0000 ld GNU ld (Gentoo 2.24.51) 2.24.51.20141013 app-shells/bash: 4.3_p30 dev-java/java-config: 2.2.0 dev-lang/perl: 5.20.1-r2 dev-lang/python: 2.7.8, 3.4.2 dev-util/cmake: 3.0.2 dev-util/pkgconfig: 0.28-r2 sys-apps/baselayout: 2.2 sys-apps/openrc: 0.13.3 sys-apps/sandbox: 2.6-r1 sys-devel/autoconf: 2.13, 2.69 sys-devel/automake: 1.11.6, 1.13.4, 1.14.1 sys-devel/binutils: 2.24-r3, 2.24.51::x-portage sys-devel/gcc: 4.6.4, 4.7.4, 4.8.4_alpha20141016::x-portage, 4.9.3_alpha20141101::x-portage, 4.10.0_alpha20141024::x-portage sys-devel/gcc-config: 1.8 sys-devel/libtool: 2.4.3-r2 sys-devel/make: 4.1-r1 sys-kernel/linux-headers: 3.17-r1 (virtual/os-headers) sys-libs/glibc: 2.19-r1 Repositories: gentoo x-portage ACCEPT_KEYWORDS="amd64 ~amd64" ACCEPT_LICENSE="*" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-flto=4 -fuse-linker-plugin -O2 -g -pipe -march=core2 -mtune=core2" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/share/config /usr/share/gnupg/qualified.txt /var/bind /var/lib/hsqldb" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c" CXXFLAGS="-flto=4 -fuse-linker-plugin -O2 -g -pipe -march=core2 -mtune=core2" DISTDIR="/usr/portage/distfiles" EMERGE_DEFAULT_OPTS="--quiet-build=n" FCFLAGS="-O2 -pipe" FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch preserve-libs protect-owned sandbox sfperms splitdebug strict unknown-features-warn unmerge-logs unmerge-orphans userfetch usersandbox usersync xattr" FFLAGS="-flto=4 -fuse-linker-plugin -O2 -g -pipe -march=core2 -mtune=core2" GENTOO_MIRRORS="ftp://gentoo.mirror.web4u.cz/" LANG="cs_CZ.utf8" LC_ALL="cs_CZ.UTF-8" LDFLAGS="-Wl,-flto -fuse-linker-plugin -Wl,--as-needed -Wl,-O2 -Wl,--sort-common -Wl,--hash-style=gnu -O2 -g -pipe -march=core2 -mtune=core2" MAKEOPTS="-j4" PKGDIR="/usr/portage/packages" PORTAGE_COMPRESS="echo" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages" PORTAGE_TMPDIR="/var/tmp" PORTDIR="/usr/portage" PORTDIR_OVERLAY="/usr/local/portage" USE="X a52 aac aalib acl acpi alsa amd64 berkdb blas bluetooth branding bzip2 cairo caps cdda cddb cdparanoia cdr cli consolekit cracklib crypt cups cvs cxx dbus declarative djvu dri dts dv dvb dvd dvdr emboss encode exif fam ffmpeg fftw firefox flac fontconfig fortran ftp gd gdbm geoip gif glamor gmp gnuplot gpm gps graphviz gsl gsm gstreamer gtk hdf5 iconv icu idn ieee1394 imagemagick imlib ipv6 ithreads javascript jbig jpeg jpeg2k ladspa lame lapack lcms ldap libass libnotify libsamplerate lzma lzo mad matroska mms mmx mmxext mng modplug modules mp3 mp4 mpeg mplayer msn mtp multilib musepack musicbrainz ncurses netcdf nls nptl ocaml ocamlopt odbc ogg opencl openexr opengl openmp pam pango pch pcre pdf perl pic plotutils png policykit postscript ppds pulseaudio python qt3support qt4 quicktime rdesktop readline samba scanner sdl semantic-desktop session slang smp sndfile sox speex spell sse sse2 ssl ssse3 startup-notification svg szip tcpd theora threads tidy tiff truetype udev udisks unicode upower usb v4l vcd vdpau vnc vorbis wavpack wmf wxwidgets x264 xattr xcb xft xine xinerama xml xosd xpm xscreensaver xv xvid xvmc zlib" ABI_X86="64 32" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="ptp2 adc65 agfa_cl20 aox ax203 barbie canon casio_qv clicksmart310 digigr8 digita dimagev dimera3500 directory enigma13 fuji gsmart300 hp215 iclick jamcam jd11 jl2005a jl2005c kodak_dc120 kodak_dc210 kodak_dc240 kodak_dc3200 kodak_ez200 konica konica_qm150 largan lg_gsm mars mustek panasonic_coolshot panasonic_dc1000 panasonic_dc1580 panasonic_l859 pccam300 pccam600 pentax polaroid_pdc320 polaroid_pdc640 polaroid_pdc700 ricoh ricoh_g3 samsung sierra sipix_blink2 sipix_web2 smal sonix sony_dscf1 sony_dscf55 soundvision spca50x sq905 st2205 stv0674 stv0680 sx330z topfield toshiba_pdrm11 tp6801" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CURL_SSL="gnutls" ELIBC="glibc" FFTOOLS="aviocat cws2fws ffescape ffeval fourcc2pixfmt graph2dot ismindex pktdumper qt-faststart trasher ffhash" GPSD_PROTOCOLS="aivdm ashtech earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 navcom nmea ntrip oceanserver oncore rtcm104v2 rtcm104v3 sirf superstar2 tnt tripmate tsip ubx fury geostar nmea2000" GRUB_PLATFORMS="pc" INPUT_DEVICES="evdev keyboard mouse joystick" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer scripting-beanshell scripting-javascript nlpsolver" LINGUAS="cs en" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-5" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_4" QEMU_SOFTMMU_TARGETS="x86_64 arm i386" QEMU_USER_TARGETS="arm i386 x86_64" RUBY_TARGETS="ruby19 ruby20 ruby21" USERLAND="GNU" VIDEO_CARDS="nouveau radeon" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" USE_PYTHON="2.7 3.4" Unset: CPPFLAGS, CTARGET, INSTALL_MASK, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, SYNC
(In reply to David Kredba from comment #0) > Could you please remove ":=" from sci-libs/cbflib-0.9.3.3 ebuild hdf5 > RDEPEND? It is blocking for me upgrade to hdf5-1.8.13 That doesn't make sense. The SLOT dependency should cause an automatic rebuild of cbflib when hdf5 is upgraded, not block the upgrade. Something else is blocking the upgrade, and you didn't post your emerge output of that problem so it's hard to tell what it is.
*** Bug 528476 has been marked as a duplicate of this bug. ***
Interesting. Yesterday portage wanted to downgrade it to hdf5-1.8.12 again with emerge -vuND --with-bdeps=y @world after manual upgrade and emerge --sync after those two slot operators went back. Today with emerge -pvuND --tree --with-bdeps=y @world it does not want to. The last package wanting downgrade yesterday was sci-physics/meep-1.2. Today it is happy: emerge -pv meep These are the packages that would be merged, in order: Calculating dependencies... done! [ebuild N ] sci-physics/meep-1.2 USE="hdf5 -examples -guile -mpb -mpi" 0 KiB Today: These are the packages that would be merged, in reverse order: Calculating dependencies... done! [nomerge ] media-gfx/freecad-0.14.3702-r1 PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7" [nomerge ] dev-python/matplotlib-1.4.2 USE="cairo excel fltk gtk gtk3 latex pyside qt4 tk wxwidgets -doc -examples {-test}" PYTHON_TARGETS="python2_7 python3_4 -python3_3" [ebuild U ] dev-python/pytz-2014.9 [2014.7] PYTHON_TARGETS="python2_7 python3_4 -pypy -python3_3 (-python3_2%)" 163 KiB [nomerge ] kde-base/kdebase-meta-4.14.2:4::x-portage USE="display-manager wallpapers (-aqua) -minimal" [nomerge ] kde-base/kdebase-startkde-4.11.13:4/4.11 USE="wallpapers (-aqua)" [ebuild U ] kde-base/systemsettings-4.11.13-r1:4/4.11 [4.11.13:4/4.11] USE="gtk handbook kscreen opengl usb (-aqua) -debug -nepomuk {-test}" 0 KiB [nomerge ] media-gfx/digikam-4.4.0:4::x-portage USE="addressbook gphoto2 handbook mysql themedesigner thumbnails video (-aqua) -debug -doc -nepomuk" LINGUAS="cs -af -ar -az -be -bg -bn -br -bs -ca -csb -cy -da -de -el -en_GB -eo -es -et -eu -fa -fi -fo -fr -fy -ga -gl -ha -he -hi -hr -hsb -hu -id -is -it -ja -ka -kk -km -ko -ku -lb -lo -lt -lv -mi -mk -mn -ms -mt -nb -nds -ne -nl -nn -nso -oc -pa -pl -pt -pt_BR -ro -ru -rw -se -sk -sl -sq -sr -sr@Latn -ss -sv -ta -te -tg -th -tr -tt -uk -uz -uz@cyrillic -ven -vi -wa -xh -zh_CN -zh_HK -zh_TW -zu" [ebuild U ] media-libs/libgphoto2-2.5.5.1-r1:0/6 [2.5.5.1:0/6] USE="exif gd jpeg nls -doc -examples -serial -zeroconf" ABI_X86="32 (64) (-x32)" CAMERAS="adc65 agfa_cl20 aox ax203 barbie canon casio_qv clicksmart310 digigr8 digita dimagev dimera3500 directory enigma13 fuji gsmart300 hp215 iclick jamcam jd11 jl2005a jl2005c kodak_dc120 kodak_dc210 kodak_dc240 kodak_dc3200 kodak_ez200 konica konica_qm150 largan lg_gsm mars mustek panasonic_coolshot panasonic_dc1000 panasonic_dc1580 panasonic_l859 pccam300 pccam600 pentax polaroid_pdc320 polaroid_pdc640 polaroid_pdc700 ptp2 ricoh ricoh_g3 samsung sierra sipix_blink2 sipix_web2 smal sonix sony_dscf1 sony_dscf55 soundvision spca50x sq905 st2205 stv0674 stv0680 sx330z topfield toshiba_pdrm11 tp6801" 0 KiB [ebuild U ] www-client/firefox-33.0-r1 [33.0] USE="dbus gstreamer jit pulseaudio system-cairo system-icu system-jpeg system-libvpx -bindist -custom-cflags -custom-optimization -debug -hardened -minimal (-pgo) (-selinux) -startup-notification -system-sqlite {-test} -wifi" LINGUAS="cs -af -ar -as -ast -be -bg -bn_BD -bn_IN -br -bs -ca -csb -cy -da -de -el -en_GB -en_ZA -eo -es_AR -es_CL -es_ES -es_MX -et -eu -fa -fi -fr -fy_NL -ga_IE -gd -gl -gu_IN -he -hi_IN -hr -hu -hy_AM -id -is -it -ja -kk -km -kn -ko -ku -lt -lv -mai -mk -ml -mr -nb_NO -nl -nn_NO -or -pa_IN -pl -pt_BR -pt_PT -rm -ro -ru -si -sk -sl -son -sq -sr -sv_SE -ta -te -th -tr -uk -vi -xh -zh_CN -zh_TW -zu" 0 KiB [ebuild U ] net-misc/geoipupdate-2.1.0 [2.0.2] 326 KiB [nomerge ] app-doc/doxygen-1.8.5 USE="doc dot latex qt4 -debug (-sqlite)" LINGUAS="cs -af -ar -ca -da -de -el -eo -es -fa -fi -fr -hr -hu -hy -id -it -ja -ko -lt -mk -nb -nl -pl -pt -pt_BR -ro -ru -sk -sl -sr -sv -tr -uk -vi -zh" [nomerge ] app-text/texlive-2014 USE="X context detex dvi2tty epspdf extra games graphics humanities jadetex luatex metapost music omega pdfannotextractor png pstricks publishers science tex4ht texi2html truetype xetex xindy xml -cjk" LINGUAS="cs en -af -ar -as -bg -bn -br -ca -cy -da -de -el -en_GB -eo -es -et -eu -fa -fi -fr -ga -gl -gu -he -hi -hr -hsb -hu -hy -ia -id -is -it -ja -kn -ko -la -lo -lt -lv -ml -mn -mr -nb -nl -nn -no -or -pa -pl -pt -rm -ro -ru -sa_IN -sco -sk -sl -sq -sr -sv -ta -te -th -tk -tr -uk -vi -zh" [nomerge ] dev-texlive/texlive-music-2014 USE="-doc -source" [ebuild U ] app-text/texlive-core-2014-r1 [2014] USE="X tk xetex -cjk -doc -source" 0 KiB [nomerge ] media-sound/flac123-0.0.12 [nomerge ] media-libs/libao-1.2.0 USE="alsa pulseaudio -mmap -nas -static-libs" ABI_X86="32 (64) (-x32)" [ebuild U ] media-sound/pulseaudio-5.0-r5 [5.0-r3] USE="X alsa asyncns caps dbus equalizer gdbm glib gtk ipv6 libsamplerate orc qt4 ssl tcpd udev webrtc-aec -bluetooth -doc -gnome -jack -lirc (-neon) (-oss) -realtime (-system-wide) -systemd {-test} -xen -zeroconf" ABI_X86="32 (64) (-x32)" 0 KiB [nomerge ] app-office/libreoffice-4.3.1.2 USE="bluetooth branding coinmp collada cups dbus gltf gstreamer gtk gtk3 java kde mysql opengl telepathy vba vlc (-aqua) -debug -eds (-firebird) -gnome -jemalloc -odk -postgres {-test}" LIBREOFFICE_EXTENSIONS="nlpsolver scripting-beanshell scripting-javascript -wiki-publisher" PYTHON_SINGLE_TARGET="python3_4 -python2_7 -python3_3" PYTHON_TARGETS="python3_4 -python2_7 -python3_3" [ebuild UD ] app-office/libreoffice-l10n-4.3.1.2::gentoo [4.3.3.2::x-portage] USE="offlinehelp" LINGUAS="cs en -af -am -ar -as -ast -be -bg -bn -bn_IN -bo -br -brx -bs -ca -ca_valencia -cy -da -de -dgo -dz -el -en_GB -en_ZA -eo -es -et -eu -fa -fi -fr -ga -gd -gl -gu -he -hi -hr -hu -id -is -it -ja -ka -kk -km -kmr_Latn -kn -ko -kok -ks -lb -lo -lt -lv -mai -mk -ml -mn -mni -mr -my -nb -ne -nl -nn -nr -nso -oc -om -or -pa_IN -pl -pt -pt_BR -ro -ru -rw -sa_IN -sat -sd -si -sid -sk -sl -sq -sr -sr_Latn -ss -st -sv -sw_TZ -ta -te -tg -th -tn -tr -ts -tt -ug -uk -uz -ve -vi -xh -zh_CN -zh_TW -zu" 0 KiB [ebuild U ] dev-db/unixODBC-2.3.2-r1 [2.3.2] USE="unicode -minimal -odbcmanual -static-libs" ABI_X86="32 (64) (-x32)" 0 KiB [nomerge ] sys-devel/gcc-4.9.3_alpha20141101:4.9::x-portage USE="ada cxx doc fortran graphite (multilib) nls nptl openmp sanitize vanilla (-altivec) -awt -debug (-fixed-point) -gcj -go (-hardened) (-libssp) (-multislot) -objc -objc++ -objc-gc -regression-test" [ebuild U ] sys-libs/glibc-2.20:2.2 [2.19-r1:2.2] USE="(multilib) nscd -debug -gd (-hardened) -profile (-selinux) -suid -systemtap -vanilla" 12 073 KiB I am sorry, closing this one as invalid. Maybe it was remaining part of split of the libtool package and portage was not able to say it exactly and for some reason removing depency on not needed slot (there is only one hdf5) and sci-physics/meep deinstallation helped me to do the upgrade.
