* Detected file collision(s): * * /usr/lib32/libmagic.so.1.0.0 * /usr/lib32/libmagic.so.1 * /usr/lib32/libmagic.so * * Searching all installed packages for file collisions... * * Press Ctrl-C to Stop * * app-emulation/emul-linux-x86-baselibs-20131008-r19:0::gentoo * /usr/lib32/libmagic.so * /usr/lib32/libmagic.so.1 * /usr/lib32/libmagic.so.1.0.0 * * Package 'sys-apps/file-5.18-r1' NOT merged due to file collisions. # emerge --info Portage 2.2.10 (hardened/linux/amd64, gcc-4.8.2, glibc-2.18-r1, 3.13.7-gentoo x86_64) ================================================================= System uname: Linux-3.13.7-gentoo-x86_64-Intel-R-_Core-TM-_i7-4770K_CPU_@_3.50GHz-with-gentoo-2.2 KiB Mem: 16128972 total, 3886144 free KiB Swap: 16777212 total, 16777212 free Timestamp of tree: Thu, 27 Mar 2014 07:30:01 +0000 ld GNU ld (GNU Binutils) 2.24 app-shells/bash: 4.2_p45-r1 dev-java/java-config: 2.2.0 dev-lang/python: 2.7.6, 3.2.5-r3, 3.3.4 dev-util/cmake: 2.8.12.2 dev-util/pkgconfig: 0.28-r1 sys-apps/baselayout: 2.2 sys-apps/openrc: 0.12.4 sys-apps/sandbox: 2.6-r1 sys-devel/autoconf: 2.13, 2.69 sys-devel/automake: 1.11.6, 1.12.6, 1.13.4, 1.14.1 sys-devel/binutils: 2.24-r2 sys-devel/gcc: 4.6.3, 4.8.2 sys-devel/gcc-config: 1.8 sys-devel/libtool: 2.4.2 sys-devel/make: 4.0-r1 sys-kernel/linux-headers: 3.13 (virtual/os-headers) sys-libs/glibc: 2.18-r1 Repositories: gentoo x11 scrill ACCEPT_KEYWORDS="amd64 ~amd64" ACCEPT_LICENSE="* -@EULA" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-O2 -pipe -march=native" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/share/config /usr/share/gnupg/qualified.txt /var/bind /var/spool/munin-async/.ssh" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo" CXXFLAGS="-O2 -pipe -march=native" DISTDIR="/usr/portage/distfiles" EMERGE_DEFAULT_OPTS="--with-bdeps y" FCFLAGS="-O2 -pipe" FEATURES="assume-digests binpkg-logs buildpkg config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr" FFLAGS="-O2 -pipe" GENTOO_MIRRORS="http://distfiles.gentoo.org" LANG="en_GB.utf8" LDFLAGS="-Wl,-O1 -Wl,--as-needed" MAKEOPTS="-j6" PKGDIR="/usr/portage/packages" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages" PORTAGE_TMPDIR="/var/tmp" PORTDIR="/usr/portage" PORTDIR_OVERLAY="/var/lib/layman/x11 /var/lib/layman/scrill" USE="X acl acpi alsa amd64 apache2 avx avx2 berkdb bluetooth bzip2 cairo caps cdda cli cracklib crypt cups cxx dbus dri eds emacs evo fam ffmpeg flac fontconfig gdbm git gmp gnome gnome-keyring gnutls gstreamer gtk hardened iconv icu introspection ipv6 java jit jpeg justify kde kerberos libnotify lua mmx mng modules mp3 multilib ncurses nls nptl ogg opengl openmp pam pax_kernel pcre perl png policykit postgres pulseaudio python qt4 readline semantic-desktop session sqlite sse sse2 sse3 sse4_1 sse4_2 ssl ssse3 startup-notification svg systemd tcpd theora threads truetype udev unicode urandom vala vorbis webkit xattr xml xmp xtpax zlib" ABI_X86="64 32" ALSA_CARDS="hd-intel" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox ubx" GRUB_PLATFORMS="pc efi-64 efi-32" INPUT_DEVICES="keyboard mouse evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="wiki-publisher presenter-minimizer" LINGUAS="en_GB en" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-5" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_2 python3_3" RUBY_TARGETS="ruby19 ruby20" USERLAND="GNU" VIDEO_CARDS="intel ilo i915 i965" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" USE_PYTHON="2.7 3.2 3.3 3.4" Unset: CPPFLAGS, CTARGET, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, SYNC
Created attachment 373634 [details] build log
Im can confirm this same error on ~amd64. build log attached. As a temp workaround i have set "sys-apps/file -abi_x86_32" in package.use # emerge --info FEATURES variable contains unknown value(s): fixpackages Portage 2.2.10 (default/linux/amd64/13.0/desktop/kde, gcc-4.8.2, glibc-2.19, 3.12.4-pf x86_64) ================================================================= System uname: Linux-3.12.4-pf-x86_64-Intel-R-_Core-TM-_i7-4770K_CPU_@_3.50GHz-with-gentoo-2.2 KiB Mem: 16388268 total, 10986472 free KiB Swap: 68184064 total, 68184064 free Timestamp of tree: Thu, 27 Mar 2014 10:45:01 +0000 ld GNU ld (GNU Binutils) 2.24 app-shells/bash: 4.2_p45-r1 dev-java/java-config: 2.2.0 dev-lang/python: 2.7.6, 3.3.4 dev-util/cmake: 2.8.12.2 dev-util/pkgconfig: 0.28-r1 sys-apps/baselayout: 2.2 sys-apps/openrc: 0.12.4 sys-apps/sandbox: 2.6-r1 sys-devel/autoconf: 2.13, 2.69 sys-devel/automake: 1.10.3, 1.11.6, 1.13.4, 1.14.1 sys-devel/binutils: 2.24-r2 sys-devel/gcc: 4.8.2 sys-devel/gcc-config: 1.8 sys-devel/libtool: 2.4.2 sys-devel/make: 4.0-r1 sys-kernel/linux-headers: 3.13 (virtual/os-headers) sys-libs/glibc: 2.19 Repositories: gentoo jeremy ACCEPT_KEYWORDS="amd64 ~amd64" ACCEPT_LICENSE="*" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-march=core-avx2 -O2 -pipe" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /etc/conf.d/fbcondecor /etc/conf.d/splash /usr/share/config /usr/share/genkernel/arch/x86_64 /usr/share/genkernel/defaults /usr/share/gnupg/qualified.txt /usr/share/themes/oxygen-gtk/gtk-2.0 /usr/share/themes/oxygen-gtk/gtk-3.0 /var/lib/hsqldb" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php5.5/ext-active/ /etc/php/cgi-php5.5/ext-active/ /etc/php/cli-php5.5/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/splash /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c" CXXFLAGS="-march=core-avx2 -O2 -pipe" DISTDIR="/usr/portage/distfiles" EMERGE_DEFAULT_OPTS="--ask" FCFLAGS="-O2 -pipe" FEATURES="assume-digests binpkg-logs candy config-protect-if-modified distlocks ebuild-locks fail-clean fakeroot fixlafiles merge-sync multilib-strict news parallel-fetch preserve-libs protect-owned sandbox sfperms split-log strict unknown-features-filter unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr" FFLAGS="-O2 -pipe" GENTOO_MIRRORS="ftp://ftp.ussg.iu.edu/pub/linux/gentoo/" LANG="en_US.UTF-8" LDFLAGS="-Wl,-O1 -Wl,--as-needed" MAKEOPTS="-j9" PKGDIR="/usr/portage/packages" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages" PORTAGE_TMPDIR="/var/tmp" PORTDIR="/usr/portage" PORTDIR_OVERLAY="/usr/local/portage" SYNC="rsync://rsync25.us.gentoo.org/gentoo-portage" USE="X a52 aac acl acpi alsa amd64 bash-completion berkdb branding bzip2 cairo caps cdda cdr cli colord consolekit cracklib crypt cups cxx dbus declarative dri dts dvd dvdr emboss encode exif extras fam firefox flac fortran gdbm gif gmp gnome gnome-keyring gpm gtk iconv icu ipv6 jpeg kde kipi lcms ldap libnotify libssh2 mad mmx mmxext mng modules mp3 mp4 mpeg multilib multiuser ncurses nls nptl nvidia ogg opengl openmp pam pango pcre pdf perl phonon plasma plugins png policykit ppds pulseaudio python qt3support qt4 readline sdl semantic-desktop session slang spell sse sse2 ssh ssl ssse3 startup-notification svg tcpd threads tiff truetype udev udisks unicode upower usb vorbis wxwidgets x264 xattr xcb xcomposite xinerama xml xscreensaver xv xvid zlib" ABI_X86="64 32" ALSA_CARDS="hda-intel ice1724" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias auth_digest authn_dbd dbd imagemap substitute" APACHE2_MPMS="prefork" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="*" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="evdev joystick keyboard mouse" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="en en_US" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-5" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_3" RUBY_TARGETS="ruby19 ruby20 ruby21" USERLAND="GNU" VIDEO_CARDS="vesa fbdev nvidia" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" Unset: CPPFLAGS, CTARGET, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON
*** Bug 505972 has been marked as a duplicate of this bug. ***
New revision of baselibs without libmagic.so* in Portage (-r22) and proper blockers, masks, etc. added in place
