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Bug 499214 - sci-libs/netcdf-cxx-4.2-r300: file collision with sci-libs/netcdf-4.3.0 in /usr/lib64/libnetcdf_c++.so.4
Summary: sci-libs/netcdf-cxx-4.2-r300: file collision with sci-libs/netcdf-4.3.0 in /u...
Status: RESOLVED NEEDINFO
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: [OLD] Library (show other bugs)
Hardware: All Linux
: Normal normal (vote)
Assignee: Gentoo Science Related Packages
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2014-01-25 13:24 UTC by Juergen Rose
Modified: 2014-02-24 09:19 UTC (History)
1 user (show)

See Also:
Package list:
Runtime testing required: ---


Attachments
/var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/temp/build.log (build.log,20.03 KB, text/plain)
2014-01-25 13:24 UTC, Juergen Rose
Details

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Description Juergen Rose 2014-01-25 13:24:24 UTC
Created attachment 368680 [details]
/var/tmp/portage/sci-libs/netcdf-cxx-4.2-r300/temp/build.log

'emerge @preserved-rebuild' fails with:
...
>>> Installing (8 of 23) sci-libs/netcdf-cxx-4.2-r300
 * This package will overwrite one or more files that may belong to other
 * packages (see list below). You can use a command such as `portageq
 * owners / <filename>` to identify the installed package that owns a
 * file. If portageq reports that only one package owns a file then do
 * NOT file a bug report. A bug report is only useful if it identifies at
 * least two or more packages that are known to install the same file(s).
 * If a collision occurs and you can not explain where the file came from
 * then you should simply ignore the collision since there is not enough
 * information to determine if a real problem exists. Please do NOT file
 * a bug report at http://bugs.gentoo.org unless you report exactly which
 * two packages install the same file(s). See
 * http://wiki.gentoo.org/wiki/Knowledge_Base:Blockers for tips on how to
 * solve the problem. And once again, please do NOT file a bug report
 * unless you have completely understood the above message.
 * 
 * Detected file collision(s):
 * 
 *      /usr/lib64/libnetcdf_c++.so.4
 * 
 * Searching all installed packages for file collisions...
 * 
 * Press Ctrl-C to Stop
 * 
 * sci-libs/netcdf-4.3.0:0::gentoo
 *      /usr/lib64/libnetcdf_c++.so.4
 * 
 * Package 'sci-libs/netcdf-cxx-4.2-r300' NOT merged due to file
 * collisions. If necessary, refer to your elog messages for the whole
 * content of the above message.

>>> Failed to install sci-libs/netcdf-cxx-4.2-r300, Log file:
Comment 1 Justin Lecher (RETIRED) gentoo-dev 2014-01-25 16:01:34 UTC
I will check that.
Comment 2 Justin Lecher (RETIRED) gentoo-dev 2014-01-25 16:11:54 UTC
Which USE do you have set for sci-libs/netcdf? It is unreproducible here.