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Bug 497982 - sys-devel/gettext-0.18.2 (from stage3-armv6j_hardfp-20131128) - msgmerge causes ./configure to hang on various packages
Summary: sys-devel/gettext-0.18.2 (from stage3-armv6j_hardfp-20131128) - msgmerge caus...
Status: RESOLVED UPSTREAM
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: [OLD] Core system (show other bugs)
Hardware: ARM Linux
: Normal normal
Assignee: Gentoo's Team for Core System packages
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2014-01-13 11:20 UTC by Tim Mohlmann
Modified: 2014-01-14 15:22 UTC (History)
0 users

See Also:
Package list:
Runtime testing required: ---


Attachments

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Description Tim Mohlmann 2014-01-13 11:20:27 UTC
Checking for msgmerge... in configure phase of various packages causes configure to hang indefinitely with 100% cpu usage. Building happens in a qemu-user chroot with binfmt_misc.

Killing the process from a different console with `kill $PID` will put the check in (Terminated) result and will continue check and building of the package. The $PID is the qemu-static-arm process using 100% cpu.

http://forums.gentoo.org/viewtopic-p-7161122.html proposed to emerge gettext with USE=-openmp. But I think this was not the problem.

Deleting the /usr/bin/msgmerge binary and re-emerging gettext with or without the openmp flag solves the problem. I had to delete it, since gettext itself checks for the binary when building.

I tried a few times now with different packages and gettext USE=openmp and USE=-openmp and everything works fine now. Is it a corrupt binary in the stage3? The binary is reinstalled the first time.

Steps to reproduce:
1. Download and extract in chroot dir. http://distfiles.gentoo.org/releases/arm/autobuilds/current-stage3-armv6j_hardfp/stage3-armv6j_hardfp-20131128.tar.bz2
2. bind mount /dev /dev/pts /proc /sys and /usr/portage into the root
3. echo ':arm:M::\x7fELF\x01\x01\x01\x00\x00\x00\x00\x00\x00\x00\x00\x00\x02\x00\x28\x00:\xff\xff\xff\xff\xff\xff\xff\x00\xff\xff\xff\xff\xff\xff\xff\xff\xfe\xff\xff\xff:/usr/bin/qemu-static-arm-binfmt:P' > /proc/sys/fs/binfmt_misc/register
4. cp -L /etc/resolv.conf $chroot/etc/resolv.conf
5. chroot $chroot /bin/bash --login
6. emerge -1v gettext OR emerge -e world OR any other package that checks for msgmerge.

Results:
Configure will hang with 100% cpu load for qemu-static-arm at the 'Checking for msgmerge...' line.

Expected results:
line explaining where the binary is (/usr/bin/msgmerge), continue of configure and build

Note:
In order not to trash my host system with static-libs requirements to compile qemu-static-arm, I directly downloaded the sabayon binary package .tbz2 archive and put the required binaries in the chroot. (app-emulation/qemu-user-1.4.0) and I used the following binaries:
* usr/bin/qemu-static-arm
* usr/bin/qemu-static-arm-binfmt
Comment 1 Tim Mohlmann 2014-01-13 11:22:38 UTC
Portage 2.2.7 (default/linux/arm/13.0/armv6j, gcc-4.7.3, glibc-2.16.0, 3.10.17-gentoo armv7l)
=================================================================
System uname: Linux-3.10.17-gentoo-armv7l-with-gentoo-2.2
KiB Mem:     3910200 total,    133228 free
KiB Swap:    6291452 total,   6253140 free
Timestamp of tree: Sat, 11 Jan 2014 15:45:01 +0000
ld GNU ld (GNU Binutils) 2.23.1
app-shells/bash:          4.2_p45
dev-lang/python:          2.7.5-r3, 3.2.5-r3
dev-util/pkgconfig:       0.28
sys-apps/baselayout:      2.2
sys-apps/openrc:          0.12.4
sys-apps/sandbox:         2.6-r1
sys-devel/autoconf:       2.69
sys-devel/automake:       1.13.4
sys-devel/binutils:       2.23.1
sys-devel/gcc:            4.7.3-r1
sys-devel/gcc-config:     1.7.3
sys-devel/libtool:        2.4.2
sys-devel/make:           3.82-r4
sys-kernel/linux-headers: 3.9 (virtual/os-headers)
sys-libs/glibc:           2.16.0
Repositories:

gentoo
    location: /usr/portage
    sync-type: rsync
    sync-uri: rsync://rsync.europe.gentoo.org/gentoo-portage
    priority: -1000

ACCEPT_KEYWORDS="arm"
ACCEPT_LICENSE="* -@EULA"
ACCEPT_PROPERTIES="*"
ACCEPT_RESTRICT="*"
APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias"
ARCH="arm"
AUTOCLEAN="yes"
BOOTSTRAP_USE="cxx unicode python_targets_python3_2 python_targets_python2_7"
CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author"
CAMERAS="ptp2"
CBUILD="armv6j-hardfloat-linux-gnueabi"
CFLAGS="-O2 -pipe -march=armv6j -mfpu=vfp -mfloat-abi=hard"
CHOST="armv6j-hardfloat-linux-gnueabi"
CLEAN_DELAY="5"
COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog"
COLLISION_IGNORE="/lib/modules/* *.py[co] *$py.class */dropin.cache"
CONFIG_PROTECT="/etc"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/gconf /etc/gentoo-release /etc/sandbox.d /etc/terminfo"
CXXFLAGS="-O2 -pipe -march=armv6j -mfpu=vfp -mfloat-abi=hard"
DISPLAY=":0"
DISTDIR="/usr/distfiles"
DRACUT_MODULES=""
EDITOR="/bin/nano"
ELIBC="glibc"
EMERGE_DEFAULT_OPTS="--ask --verbose --keep-going --buildpkg=y"
EMERGE_WARNING_DELAY="10"
EPREFIX=""
EROOT="/"
FCFLAGS="-O2 -pipe -march=armv6j"
FEATURES="assume-digests binpkg-logs buildpkg clean-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync"
FETCHCOMMAND="wget -t 3 -T 60 --passive-ftp -O "${DISTDIR}/${FILE}" "${URI}""
FETCHCOMMAND_RSYNC="rsync -avP "${URI}" "${DISTDIR}/${FILE}""
FETCHCOMMAND_SFTP="bash -c "x=\${2#sftp://} ; host=\${x%%/*} ; port=\${host##*:} ; host=\${host%:*} ; [[ \${host} = \${port} ]] && port=22 ; eval \"declare -a ssh_opts=(\${3})\" ; exec sftp -P \${port} \"\${ssh_opts[@]}\" \"\${host}:/\${x#*/}\" \"\$1\"" sftp "${DISTDIR}/${FILE}" "${URI}" "${PORTAGE_SSH_OPTS}""
FETCHCOMMAND_SSH="bash -c "x=\${2#ssh://} ; host=\${x%%/*} ; port=\${host##*:} ; host=\${host%:*} ; [[ \${host} = \${port} ]] && port=22 ; exec rsync --rsh=\"ssh -p\${port} \${3}\" -avP \"\${host}:/\${x#*/}\" \"\$1\"" rsync "${DISTDIR}/${FILE}" "${URI}" "${PORTAGE_SSH_OPTS}""
FFLAGS="-O2 -pipe -march=armv6j"
GCC_SPECS=""
GENTOO_MIRRORS="http://mirror.nl.leaseweb.net/gentoo/ http://distfiles.gentoo.org"
GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox ubx"
GRUB_PLATFORMS=""
HOME="/home/tim"
INFOPATH="/usr/share/info:/usr/share/gcc-data/armv6j-hardfloat-linux-gnueabi/4.7.3/info:/usr/share/binutils-data/armv6j-hardfloat-linux-gnueabi/2.23.1/info"
INPUT_DEVICES="evdev"
IUSE_IMPLICIT="prefix"
KERNEL="linux"
LANG="en_US.utf8"
LANGUAGE=""
LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text"
LC_MESSAGES="C"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
LESS="-R -M --shift 5"
LESSOPEN="|lesspipe %s"
LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer"
LINGUAS="en nl"
LOGNAME="root"
LS_COLORS="rs=0:di=01;34:ln=01;36:mh=00:pi=40;33:so=01;35:do=01;35:bd=40;33;01:cd=40;33;01:or=01;05;37;41:mi=01;05;37;41:su=37;41:sg=30;43:ca=30;41:tw=30;42:ow=34;42:st=37;44:ex=01;32:*.tar=01;31:*.tgz=01;31:*.arj=01;31:*.taz=01;31:*.lzh=01;31:*.lzma=01;31:*.tlz=01;31:*.txz=01;31:*.zip=01;31:*.z=01;31:*.Z=01;31:*.dz=01;31:*.gz=01;31:*.lz=01;31:*.xz=01;31:*.bz2=01;31:*.bz=01;31:*.tbz=01;31:*.tbz2=01;31:*.tz=01;31:*.deb=01;31:*.rpm=01;31:*.jar=01;31:*.war=01;31:*.ear=01;31:*.sar=01;31:*.rar=01;31:*.ace=01;31:*.zoo=01;31:*.cpio=01;31:*.7z=01;31:*.rz=01;31:*.jpg=01;35:*.jpeg=01;35:*.gif=01;35:*.bmp=01;35:*.pbm=01;35:*.pgm=01;35:*.ppm=01;35:*.tga=01;35:*.xbm=01;35:*.xpm=01;35:*.tif=01;35:*.tiff=01;35:*.png=01;35:*.svg=01;35:*.svgz=01;35:*.mng=01;35:*.pcx=01;35:*.mov=01;35:*.mpg=01;35:*.mpeg=01;35:*.m2v=01;35:*.mkv=01;35:*.webm=01;35:*.ogm=01;35:*.mp4=01;35:*.m4v=01;35:*.mp4v=01;35:*.vob=01;35:*.qt=01;35:*.nuv=01;35:*.wmv=01;35:*.asf=01;35:*.rm=01;35:*.rmvb=01;35:*.flc=01;35:*.avi=01;35:*.fli=01;35:*.flv=01;35:*.gl=01;35:*.dl=01;35:*.xcf=01;35:*.xwd=01;35:*.yuv=01;35:*.cgm=01;35:*.emf=01;35:*.axv=01;35:*.anx=01;35:*.ogv=01;35:*.ogx=01;35:*.pdf=00;32:*.ps=00;32:*.txt=00;32:*.patch=00;32:*.diff=00;32:*.log=00;32:*.tex=00;32:*.doc=00;32:*.aac=00;36:*.au=00;36:*.flac=00;36:*.mid=00;36:*.midi=00;36:*.mka=00;36:*.mp3=00;36:*.mpc=00;36:*.ogg=00;36:*.ra=00;36:*.wav=00;36:*.axa=00;36:*.oga=00;36:*.spx=00;36:*.xspf=00;36:"
MAIL="/var/mail/root"
MAKEOPTS="-j4"
MANPATH="/usr/local/share/man:/usr/share/man:/usr/share/gcc-data/armv6j-hardfloat-linux-gnueabi/4.7.3/man:/usr/share/binutils-data/armv6j-hardfloat-linux-gnueabi/2.23.1/man"
MULTIOSDIRS="."
NETBEANS="apisupport cnd groovy gsf harness ide identity j2ee java mobility nb php profiler soa visualweb webcommon websvccommon xml"
OFFICE_IMPLEMENTATION="libreoffice"
PAGER="/usr/bin/less"
PATH="/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/bin:/usr/armv6j-hardfloat-linux-gnueabi/gcc-bin/4.7.3"
PHP_TARGETS="php5-5"
PKGDIR="/usr/packages"
PORTAGE_ARCHLIST="ppc sparc64-freebsd ppc-openbsd x86-openbsd ppc64 x86-winnt x86-fbsd ppc-aix alpha arm x86-freebsd s390 amd64 arm-linux x86-macos x64-openbsd ia64-hpux hppa x86-netbsd ppc64-linux x86-cygwin amd64-linux ia64-linux x86 sparc-solaris x64-freebsd sparc64-solaris x86-linux x64-macos sparc m68k-mint ia64 mips ppc-macos x86-interix hppa-hpux amd64-fbsd x64-solaris m68k sh x86-solaris sparc-fbsd"
PORTAGE_BIN_PATH="/usr/lib/portage/bin"
PORTAGE_COMPRESS_EXCLUDE_SUFFIXES="css gif htm[l]? jp[e]?g js pdf png"
PORTAGE_CONFIGROOT="/"
PORTAGE_DEBUG="0"
PORTAGE_DEPCACHEDIR="/var/cache/edb/dep"
PORTAGE_ELOG_CLASSES="log warn error"
PORTAGE_ELOG_MAILFROM="portage@localhost"
PORTAGE_ELOG_MAILSUBJECT="[portage] ebuild log for ${PACKAGE} on ${HOST}"
PORTAGE_ELOG_MAILURI="root"
PORTAGE_ELOG_SYSTEM="save_summary:log,warn,error,qa echo"
PORTAGE_FETCH_CHECKSUM_TRY_MIRRORS="5"
PORTAGE_FETCH_RESUME_MIN_SIZE="350K"
PORTAGE_GID="250"
PORTAGE_GPG_SIGNING_COMMAND="gpg --sign --digest-algo SHA256 --clearsign --yes --default-key "${PORTAGE_GPG_KEY}" --homedir "${PORTAGE_GPG_DIR}" "${FILE}""
PORTAGE_INST_GID="0"
PORTAGE_INST_UID="0"
PORTAGE_INTERNAL_CALLER="1"
PORTAGE_OVERRIDE_EPREFIX=""
PORTAGE_PYM_PATH="/usr/lib/portage/pym"
PORTAGE_PYTHONPATH="/usr/lib/portage/pym"
PORTAGE_REPOSITORIES="[DEFAULT]
main-repo = gentoo

[gentoo]
location = /usr/portage
masters = 
priority = -1000
sync-type = rsync
sync-uri = rsync://rsync.europe.gentoo.org/gentoo-portage
"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_RSYNC_RETRIES="-1"
PORTAGE_SYNC_STALE="30"
PORTAGE_TMPDIR="/var/tmp"
PORTAGE_VERBOSE="1"
PORTAGE_WORKDIR_MODE="0700"
PORTAGE_XATTR_EXCLUDE="security.* system.nfs4_acl"
PORTDIR="/usr/portage"
PORTDIR_OVERLAY=""
PORT_LOGDIR_CLEAN="find "${PORT_LOGDIR}" -type f ! -name "summary.log*" -mtime +7 -delete"
PROFILE_ONLY_VARIABLES="ARCH ELIBC IUSE_IMPLICIT KERNEL USERLAND USE_EXPAND_IMPLICIT USE_EXPAND_UNPREFIXED USE_EXPAND_VALUES_ARCH USE_EXPAND_VALUES_ELIBC USE_EXPAND_VALUES_KERNEL USE_EXPAND_VALUES_USERLAND"
PWD="/"
PYTHONDONTWRITEBYTECODE="1"
PYTHON_SINGLE_TARGET="python2_7"
PYTHON_TARGETS="python2_7 python3_3"
RESUMECOMMAND="wget -c -t 3 -T 60 --passive-ftp -O "${DISTDIR}/${FILE}" "${URI}""
RESUMECOMMAND_RSYNC="rsync -avP "${URI}" "${DISTDIR}/${FILE}""
RESUMECOMMAND_SSH="bash -c "x=\${2#ssh://} ; host=\${x%%/*} ; port=\${host##*:} ; host=\${host%:*} ; [[ \${host} = \${port} ]] && port=22 ; exec rsync --rsh=\"ssh -p\${port} \${3}\" -avP \"\${host}:/\${x#*/}\" \"\$1\"" rsync "${DISTDIR}/${FILE}" "${URI}" "${PORTAGE_SSH_OPTS}""
ROOT="/"
ROOTPATH="/opt/bin:/usr/armv6j-hardfloat-linux-gnueabi/gcc-bin/4.7.3"
RPMDIR="/usr/portage/rpm"
RUBY_TARGETS="ruby19 ruby18"
SHELL="/bin/bash"
SHLVL="2"
SUDO_COMMAND="./chroot.sh"
SUDO_GID="1000"
SUDO_UID="1000"
SUDO_USER="tim"
SYNC="rsync://rsync.europe.gentoo.org/gentoo-portage"
TERM="xterm"
UNINSTALL_IGNORE="/lib/modules/*"
USE="acl arm berkdb bzip2 cli cracklib crypt cxx dri fortran gdbm iconv ipv6 modules mudflap ncurses nls nptl openmp pam pcre readline session ssl tcpd unicode zlib" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="en nl" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-5" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_3" RUBY_TARGETS="ruby19 ruby18" USERLAND="GNU" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
USER="root"
USERLAND="GNU"
USERNAME="root"
USE_EXPAND="ABI_MIPS ABI_X86 ALSA_CARDS APACHE2_MODULES APACHE2_MPMS CALLIGRA_FEATURES CAMERAS COLLECTD_PLUGINS CROSSCOMPILE_OPTS CURL_SSL DRACUT_MODULES DVB_CARDS ELIBC ENLIGHTENMENT_MODULES FCDSL_CARDS FFTOOLS FOO2ZJS_DEVICES FRITZCAPI_CARDS GPSD_PROTOCOLS GRUB_PLATFORMS INPUT_DEVICES KERNEL LCD_DEVICES LIBREOFFICE_EXTENSIONS LINGUAS LIRC_DEVICES MONKEYD_PLUGINS NETBEANS_MODULES NGINX_MODULES_HTTP NGINX_MODULES_MAIL OFED_DRIVERS OFFICE_IMPLEMENTATION OPENMPI_FABRICS OPENMPI_OFED_FEATURES OPENMPI_RM PHP_TARGETS PYTHON_SINGLE_TARGET PYTHON_TARGETS QEMU_SOFTMMU_TARGETS QEMU_USER_TARGETS RUBY_TARGETS SANE_BACKENDS USERLAND VIDEO_CARDS VOICEMAIL_STORAGE XFCE_PLUGINS XTABLES_ADDONS"
USE_EXPAND_HIDDEN="ABI_MIPS ABI_X86 CROSSCOMPILE_OPTS ELIBC KERNEL USERLAND"
USE_EXPAND_IMPLICIT="ARCH ELIBC KERNEL USERLAND"
USE_EXPAND_UNPREFIXED="ARCH"
USE_EXPAND_VALUES_ARCH="alpha amd64 amd64-fbsd amd64-linux arm arm-linux hppa hppa-hpux ia64 ia64-hpux ia64-linux m68k m68k-mint mips ppc ppc64 ppc64-linux ppc-aix ppc-macos ppc-openbsd s390 sh sparc sparc64-freebsd sparc64-solaris sparc-fbsd sparc-solaris x64-freebsd x64-macos x64-openbsd x64-solaris x86 x86-cygwin x86-fbsd x86-freebsd x86-interix x86-linux x86-macos x86-netbsd x86-openbsd x86-solaris x86-winnt"
USE_EXPAND_VALUES_ELIBC="AIX Cygwin Darwin FreeBSD glibc HPUX Interix mintlib musl NetBSD OpenBSD SunOS uclibc Winnt"
USE_EXPAND_VALUES_KERNEL="AIX Cygwin Darwin FreeBSD freemint HPUX Interix linux NetBSD OpenBSD SunOS Winnt"
USE_EXPAND_VALUES_USERLAND="BSD GNU"
USE_ORDER="env:pkg:conf:defaults:pkginternal:repo:env.d"
VIDEO_CARDS=""
XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
_="/usr/bin/emerge"
Comment 2 SpanKY gentoo-dev 2014-01-14 15:22:09 UTC
unless you can reproduce on real hardware, we're not tracking issues like this as they're most likely problems in qemu itself