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Bug 497580 - x11-libs/libXfixes `cat /usr/include/X11/extensions/Xfixes.h` results in Input/output error
Summary: x11-libs/libXfixes `cat /usr/include/X11/extensions/Xfixes.h` results in Inpu...
Status: RESOLVED NEEDINFO
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: Normal normal (vote)
Assignee: Gentoo X packagers
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2014-01-08 21:11 UTC by Tom Wijsman (TomWij) (RETIRED)
Modified: 2014-01-09 14:10 UTC (History)
0 users

See Also:
Package list:
Runtime testing required: ---


Attachments
build.log (file_497580.txt,2.74 KB, text/plain)
2014-01-08 21:11 UTC, Tom Wijsman (TomWij) (RETIRED)
Details
config.log (file_497580.txt,265.36 KB, text/plain)
2014-01-08 21:22 UTC, Tom Wijsman (TomWij) (RETIRED)
Details

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Description Tom Wijsman (TomWij) (RETIRED) gentoo-dev 2014-01-08 21:11:18 UTC
Created attachment 367444 [details]
build.log

Experienced by user 'sk3lly' on #gentoo.

Portage 2.2.7 (default/linux/amd64/13.0/desktop, gcc-4.7.3, glibc-2.17, 3.10.25-gentoo x86_64)
=================================================================
                         System Settings
=================================================================
System uname: Linux-3.10.25-gentoo-x86_64-Intel-R-_Core-TM-_i3_CPU_M_370_@_2.40GHz-with-gentoo-2.2
KiB Mem:     3835272 total,   3530872 free
KiB Swap:     524284 total,    524284 free
Timestamp of tree: Wed, 08 Jan 2014 03:00:01 +0000
ld GNU ld (GNU Binutils) 2.23.2
app-shells/bash:          4.2_p45
dev-lang/python:          2.7.5-r3, 3.3.2-r2
dev-util/pkgconfig:       0.28
sys-apps/baselayout:      2.2
sys-apps/openrc:          0.12.4
sys-apps/sandbox:         2.6-r1
sys-devel/autoconf:       2.13, 2.69
sys-devel/automake:       1.13.4
sys-devel/binutils:       2.23.2
sys-devel/gcc:            4.7.3-r1
sys-devel/gcc-config:     1.7.3
sys-devel/libtool:        2.4.2
sys-devel/make:           3.82-r4
sys-kernel/linux-headers: 3.9 (virtual/os-headers)
sys-libs/glibc:           2.17
Repositories: gentoo
ACCEPT_KEYWORDS="amd64"
ACCEPT_LICENSE="* -@EULA"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-O2 -pipe -march=native "
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/sandbox.d /etc/terminfo"
CXXFLAGS="-O2 -pipe -march=native "
DISTDIR="/usr/portage/distfiles"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync"
FFLAGS="-O2 -pipe"
GENTOO_MIRRORS="ftp://mirrors.tera-byte.com/pub/gentoo http://gentoo.mirrors.tera-byte.com/ rsync://mirrors.tera-byte.com/gentoo"
LANG="en_US.iso88591"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
PORTDIR_OVERLAY=""
USE="X a52 aac acl acpi alsa amd64 berkdb bindist bluetooth branding bzip2 cairo cdda cdr cli cracklib crypt css cups cxx dri dts dvd dvdr emboss encode exif fam firefox flac fortran gdbm gif gpm hardened iconv jpeg lcms ldap libnotify mad mmx mng modules mp3 mp4 mpeg mudflap multilib ncurses nls nptl ogg opengl openmp pam pango pcre pdf png ppds qt3support qt4 readline sdl session spell sse sse2 sse3 sse4_1 ssl ssse3 startup-notification svg tcpd tiff truetype udev udisks unicode upower usb vorbis wxwidgets x264 xcb xml xv xvid zlib" ABI_X86="64" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="keyboard mouse evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-5" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_3" RUBY_TARGETS="ruby19 ruby18" USERLAND="GNU" VIDEO_CARDS="fbdev glint intel mach64 mga nouveau nv r128 radeon savage sis tdfx trident vesa via vmware dummy v4l" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, MAKEOPTS, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, SYNC, USE_PYTHON
Comment 1 Tom Wijsman (TomWij) (RETIRED) gentoo-dev 2014-01-08 21:22:22 UTC
Created attachment 367446 [details]
config.log

/usr/include/X11/extensions/Xfixes.h:49:39: error: /usr/include/X11/extensions/xfixeswire.h: Input/output error

Might not be an actual ffmpeg error; but, would need further debugging steps to proceed here. Any idea? I'll try to get the user to CC on the bug.
Comment 2 Tom Wijsman (TomWij) (RETIRED) gentoo-dev 2014-01-08 21:33:20 UTC
`cat /usr/include/X11/extensions/Xfixes.h` results in Input/output error whereas other files run fine; temporarily moving this to x11-libs/libXfixes maintainers, until more debugging information is available.
Comment 3 Chí-Thanh Christopher Nguyễn gentoo-dev 2014-01-09 12:29:58 UTC
What is the result of a badblocks run on the block device which that file is on?
Comment 4 Tom Wijsman (TomWij) (RETIRED) gentoo-dev 2014-01-09 14:10:39 UTC
The user was since starting to run fsck, but I don't know about the results of that; it indeed sounds like something like that, I'll close this for now assuming the problem to be with a damaged block. Especially since this isn't reproducible.