Created attachment 366898 [details] build log I tried emerging glibc again and trying again but it didn't help. $ emerge --info '=games-arcade/gnujump-1.0.6::gentoo' Portage 2.2.7 (default/linux/amd64/13.0/desktop/kde, gcc-4.7.3, glibc-2.16.0, 3.10.17-gentoo_gg6 x86_64) ================================================================= System Settings ================================================================= System uname: Linux-3.10.17-gentoo_gg6-x86_64-Intel-R-_Core-TM-_i7-3517U_CPU_@_1.90GHz-with-gentoo-2.2 KiB Mem: 3936724 total, 1318264 free KiB Swap: 4509692 total, 4352240 free Timestamp of tree: Fri, 03 Jan 2014 18:15:02 +0000 ld GNU ld (GNU Binutils) 2.23.2 app-shells/bash: 4.2_p45 dev-lang/python: 2.7.5-r3, 3.3.2-r2 dev-util/cmake: 2.8.11.2 dev-util/pkgconfig: 0.28 sys-apps/baselayout: 2.2 sys-apps/openrc: 0.12.4 sys-apps/sandbox: 2.6-r1 sys-devel/autoconf: 2.13, 2.69 sys-devel/automake: 1.10.3, 1.11.6, 1.12.6, 1.13.4 sys-devel/binutils: 2.23.2 sys-devel/gcc: 4.7.3-r1 sys-devel/gcc-config: 1.7.3 sys-devel/libtool: 2.4.2 sys-devel/make: 3.82-r4 sys-kernel/linux-headers: 3.9 (virtual/os-headers) sys-libs/glibc: 2.16.0 Repositories: gentoo ACCEPT_KEYWORDS="amd64" ACCEPT_LICENSE="* -@EULA" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-march=native -O2 -pipe -ggdb" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/share/config /usr/share/gnupg/qualified.txt /usr/share/themes/oxygen-gtk/gtk-2.0" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo" CXXFLAGS="-march=native -O2 -pipe -ggdb" DISTDIR="/usr/portage/distfiles" EMERGE_DEFAULT_OPTS="--ask-enter-invalid" FCFLAGS="-O2 -pipe" FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch preserve-libs protect-owned sandbox sfperms splitdebug strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync" FFLAGS="-O2 -pipe" GENTOO_MIRRORS="http://ftp.vectranet.pl/gentoo/ http://gentoo.bloodhost.ru/ http://mirror2.corbina.ru/gentoo-distfiles/ http://mirror.yandex.ru/gentoo-distfiles/ http://tux.rainside.sk/gentoo/ http://ftp.df.lth.se/pub/gentoo/ http://gentoo.kiev.ua/ftp/" LANG="en_US.UTF-8" LDFLAGS="-Wl,-O1 -Wl,--as-needed" MAKEOPTS="-j9" PKGDIR="/usr/portage/packages" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages" PORTAGE_TMPDIR="/var/tmp" PORTDIR="/usr/portage" PORTDIR_OVERLAY="" SYNC="rsync://rsync.ru.gentoo.org/gentoo-portage" USE="X a52 aac acl acpi alsa amd64 berkdb bindist bluetooth branding bzip2 cairo cdda cdr cli cmake consolekit cracklib crypt cryptsetup cups cxx dbus declarative dri dts dvd dvdr emacs emboss encode exif fam firefox flac fortran gdbm gif git gpm gtk iconv ipv6 jpeg kde kipi lcms ldap libnotify mad mmx mng modules mp3 mp4 mpeg mudflap multilib ncurses nls nptl ogg opengl openmp pam pango pcre pdf phonon plasma png policykit ppds pulseaudio qt3support qt4 readline sdl semantic-desktop session spell sse sse1 sse2 ssl startup-notification svg tcpd tiff truetype udev udisks unicode upower usb valgrind vorbis wxwidgets x264 xcb xcomposite xinerama xml xscreensaver xv xvid zlib" ABI_X86="64" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox ubx" GRUB_PLATFORMS="efi-64 pc" INPUT_DEVICES="evdev synaptics" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="en ru" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-5" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_3" RUBY_TARGETS="ruby19 ruby18" USERLAND="GNU" VIDEO_CARDS="intel" XFCE_PLUGINS="brightness clock trash" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" Unset: CPPFLAGS, CTARGET, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON $ emerge -pqv '=games-arcade/gnujump-1.0.6::gentoo' [ebuild N ] games-arcade/gnujump-1.0.6
Similar happens during compile of x11-misc/pcmanfm-0.9.10 Command that triggers Error: libtool: link: x86_64-pc-linux-gnu-gcc -pthread -I/usr/include/gtk-2.0 -I/usr/lib64/gtk-2.0/include -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/libdrm -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libpng16 -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/freetype2 -pthread -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -pthread -I/usr/include/gio-unix-2.0/ -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -pthread -I/usr/include/libfm -I/usr/include/gtk-2.0 -I/usr/lib64/gtk-2.0/include -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/libdrm -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libpng16 -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/freetype2 -I/usr/include/libfm -I/usr/include/gio-unix-2.0/ -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/menu-cache -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DG_DISABLE_CAST_CHECKS -Wall -Werror-implicit-function-declaration -O2 -pipe -march=core-avx2 -Wl,-O1 -o pcmanfm pcmanfm-pcmanfm.o pcmanfm-app-config.o pcmanfm-main-win.o pcmanfm-tab-page.o pcmanfm-desktop.o pcmanfm-volume-manager.o pcmanfm-pref.o pcmanfm-utils.o pcmanfm-single-inst.o -pthread -Wl,--export-dynamic -pthread -pthread -Wl,--as-needed -lX11 -lgmodule-2.0 -lfm-gtk -lgtk-x11-2.0 -lgdk-x11-2.0 -lpangocairo-1.0 -latk-1.0 -lcairo -lgdk_pixbuf-2.0 -lpangoft2-1.0 -lpango-1.0 -lfreetype -lfontconfig -lfm -lgthread-2.0 /usr/lib64/libmenu-cache.so -lgio-2.0 -lgobject-2.0 -lglib-2.0 -pthread Error message: /usr/lib/gcc/x86_64-pc-linux-gnu/4.8.2/../../../../x86_64-pc-linux-gnu/bin/ld: pcmanfm-desktop.o: undefined reference to symbol 'floor@@GLIBC_2.2.5' /usr/lib/gcc/x86_64-pc-linux-gnu/4.8.2/../../../../x86_64-pc-linux-gnu/bin/ld: note: 'floor@@GLIBC_2.2.5' is defined in DSO /lib64/libm.so.6 so try adding it to the linker command line /lib64/libm.so.6: could not read symbols: Invalid operation collect2: error: ld returned 1 exit status http://fedoraproject.org/wiki/UnderstandingDSOLinkChange explains problem and solution 'LDFLAGS="-lm" emerge x11-misc/pcmanfm-0.9.10' worked as a temporary solution Suggest manually appending relevant linker flags in the .ebuild for each package where this bug is reported for permanent fix
This is what I get with games-arcade/gnujump-1.0.8: /usr/lib/gcc/i686-pc-linux-gnu/4.8.3/../../../../i686-pc-linux-gnu/bin/ld: SDL_rotozoom.o: undefined reference to symbol 'sincos@@GLIBC_2.1 ' /usr/lib/gcc/i686-pc-linux-gnu/4.8.3/../../../../i686-pc-linux-gnu/bin/ld: note: 'sincos@@GLIBC_2.1' is defined in DSO /lib/libm.so.6 so tr y adding it to the linker command line /lib/libm.so.6: could not read symbols: Invalid operation collect2: error: ld returned 1 exit status make[2]: *** [gnujump] Error 1 make[2]: Leaving directory `/var/tmp/portage/games-arcade/gnujump-1.0.8/work/gnujump-1.0.8/src' make[1]: *** [all-recursive] Error 1 make[1]: Leaving directory `/var/tmp/portage/games-arcade/gnujump-1.0.8/work/gnujump-1.0.8' make: *** [all] Error 2 emake failed * ERROR: games-arcade/gnujump-1.0.8::gentoo failed (compile phase): * died running emake, base_src_make
