When emerging sci-biology/samtools by Gentoo Prefix on Mavericks, it fails with these message: >>> Install samtools-0.1.19 into /Users/yanll/Gentoo/var/tmp/portage/sci-biology/samtools-0.1.19/image/ category sci-biology !!! Section 'gentoo' in repos.conf has name different from repository name 'gentoo_prefix' set inside repository !!! dolib: libbam.so.1 does not exist * ERROR: sci-biology/samtools-0.1.19::gentoo_prefix failed (install phase): * dolib failed * * If you need support, post the output of `emerge --info '=sci-biology/samtools-0.1.19::gentoo_prefix'`, * the complete build log and the output of `emerge -pqv '=sci-biology/samtools-0.1.19::gentoo_prefix'`. * The complete build log is located at '/Users/yanll/Gentoo/var/tmp/portage/sci-biology/samtools-0.1.19/temp/build.log'. * The ebuild environment file is located at '/Users/yanll/Gentoo/var/tmp/portage/sci-biology/samtools-0.1.19/temp/environment'. * Working directory: '/Users/yanll/Gentoo/var/tmp/portage/sci-biology/samtools-0.1.19/work/samtools-0.1.19' * S: '/Users/yanll/Gentoo/var/tmp/portage/sci-biology/samtools-0.1.19/work/samtools-0.1.19' * QA Notice: file does not exist: * * dolib: libbam.so.1 does not exist Reproducible: Always I noticed that it is hard-coded to dolib xxx.so.1, however it should be xxx.dylib instead on MacOS. Here goes my "emerge --info":
Thanks! I've committed a fix that uses dylib on Darwin.
