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Bug 476682 - app-arch/bzip2-1.0.6-r3 compiled with sys-devel/gcc-4.8.1 CFLAGS=-fgraphite-identity - merge: bzip2: Data integrity error when decompressing.
Summary: app-arch/bzip2-1.0.6-r3 compiled with sys-devel/gcc-4.8.1 CFLAGS=-fgraphite-i...
Status: RESOLVED UPSTREAM
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: Normal normal
Assignee: Gentoo's Team for Core System packages
URL:
Whiteboard:
Keywords:
Depends on:
Blocks: 915000
  Show dependency tree
 
Reported: 2013-07-13 05:17 UTC by Sergey Ilinykh
Modified: 2024-09-22 19:57 UTC (History)
6 users (show)

See Also:
Package list:
Runtime testing required: ---

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Description Sergey Ilinykh 2013-07-13 05:17:04 UTC 
when bzip2 compiled with gcc-4.8.1 using -fgraphite-identity in CFLAGS, bzip2 can't unpack anything jut complaining about corrupted achive.

moreover even emerging bzip2 itself causes errors on some last steps

>>> Installing (1 of 1) app-arch/bzip2-1.0.6-r3

bzip2: Data integrity error when decompressing.
	Input file = /var/db/pkg/app-arch/bzip2-1.0.6-r3/environment.bz2, output file = (stdout)


Reproducible: Always
Comment 1 Sergey Ilinykh 2013-07-13 05:27:01 UTC 
$ emerge --info
Portage 2.2.0_alpha188 (default/linux/amd64/13.0/developer, gcc-4.8.1, glibc-2.17, 3.9.7-gentoo x86_64)
=================================================================
System uname: Linux-3.9.7-gentoo-x86_64-Intel-R-_Core-TM-_i7-3610QM_CPU_@_2.30GHz-with-gentoo-2.2
KiB Mem:    16309860 total,  15056656 free
KiB Swap:          0 total,         0 free
Timestamp of tree: Fri, 12 Jul 2013 15:30:01 +0000
ld GNU ld (GNU Binutils) 2.23.1
distcc 3.1 x86_64-pc-linux-gnu [disabled]
ccache version 3.1.9 [enabled]
app-shells/bash:          4.2_p45
dev-java/java-config:     2.2.0
dev-lang/python:          2.7.5, 3.2.5-r1, 3.3.2-r1
dev-util/ccache:          3.1.9
dev-util/cmake:           2.8.11.1
dev-util/pkgconfig:       0.28
sys-apps/baselayout:      2.2
sys-apps/openrc:          0.11.8
sys-apps/sandbox:         2.6-r1
sys-devel/autoconf:       2.13, 2.69
sys-devel/automake:       1.9.6-r3, 1.11.6, 1.12.6, 1.13.4, 1.14
sys-devel/binutils:       2.23.1
sys-devel/gcc:            4.7.3, 4.8.1
sys-devel/gcc-config:     1.8
sys-devel/libtool:        2.4.2
sys-devel/make:           3.82-r4
sys-kernel/linux-headers: 3.9 (virtual/os-headers)
sys-libs/glibc:           2.17
Repositories: gentoo rion sunrise Armageddon mate-overlay qt test
Installed sets: @system
ACCEPT_KEYWORDS="amd64 ~amd64"
ACCEPT_LICENSE="*"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=corei7-avx -O2 -pipe -ftree-vectorize -fgraphite-identity -maes -floop-parallelize-all -floop-interchange -floop-block -fira-loop-pressure"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/share/gnupg/qualified.txt"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php5.4/ext-active/ /etc/php/apache2-php5.5/ext-active/ /etc/php/cgi-php5.4/ext-active/ /etc/php/cgi-php5.5/ext-active/ /etc/php/cli-php5.4/ext-active/ /etc/php/cli-php5.5/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo"
CXXFLAGS="-march=corei7-avx -O2 -pipe -ftree-vectorize -fgraphite-identity -maes -floop-parallelize-all -floop-interchange -floop-block -fira-loop-pressure"
DISTDIR="/home/portage/distfiles"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-logs ccache config-protect-if-modified digest distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch preserve-libs protect-owned sandbox sfperms sign splitdebug strict test-fail-continue unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox"
FFLAGS="-O2 -pipe"
GENTOO_MIRRORS="http://distfiles.gentoo.org"
LANG="ru_RU.UTF-8"
LDFLAGS="-Wl,--hash-style=gnu -Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j9"
PKGDIR="/home/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/home/portage/build"
PORTDIR="/home/portage/portage"
PORTDIR_OVERLAY="/var/lib/layman/rion /var/lib/layman/sunrise /var/lib/layman/Armageddon /var/lib/layman/mate /var/lib/layman/qt /home/rion/projects/test-overlay"
SYNC="rsync://rsync.gentoo.org/gentoo-portage"
USE="X a52 aac acl acpi alsa amd64 avahi bash-completion berkdb bluetooth branding bzip2 cairo cdda cddb cdio cdr cli consolekit cracklib crypt cups custom-optimization cxx dbus dri dts dv dvb dvd dvdr emboss encode exif faac faad fam ffmpeg firefox flac fuse gallium gif glamor glitz gnome-keyring gphoto2 gpm gsm gstreamer gtk gtk3 h323 iconv idn ipv6 jabber java6 jingle jpeg jpeg2k lcms libcanberra libnotify mad mate mmx mng modplug modules mp3 mp4 mpeg mtp mudflap multilib ncurses networkmanager nls nptl ogg opengl openmp pam pango pch pcmcia pcre pdf png policykit ppds qt4 readline rtmp samba schroedinger sdl session sip smp snmp speex spell sse sse2 sse3 ssl ssse3 startup-notification subversion svg symlink tcpd theora threads thunar tiff tokenizer truetype udev udisks unicode upnp upower usb v4l v4l2 vaapi vdpau vhosts vnc vorbis vpx webkit wifi x264 xcb xcomposite xml xv xvid xvmc zlib" ABI_X86="64" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="dav dav_fs authn_file auth_basic auth_digest authz_groupfile authz_host dir mime log_config" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="ptp2 canon" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" DRACUT_MODULES="plymouth" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ubx" GRUB_PLATFORMS="pc" INPUT_DEVICES="evdev synaptics" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="ru ru_RU en" NETBEANS_MODULES="apisupport harness ide nb websvccommon php profiler webcommon cnd ergonomics dlight" NGINX_MODULES_HTTP="dav fastcgi flv access auth_basic autoindex charset browser empty_gif gzip map memcached rewrite userid" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-4" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_2" QEMU_SOFTMMU_TARGETS="i386 x86_64" QEMU_USER_TARGETS="i386 x86_64" RUBY_TARGETS="ruby19 ruby18" USERLAND="GNU" VIDEO_CARDS="vesa intel i965 fglrx" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON
Comment 2 dE 2014-01-22 03:49:49 UTC 
Confirm.

This's a serious bug.
Comment 3 Boris Staletic 2024-09-22 18:41:34 UTC 
I have tried to repro with gcc 14.2.1_p20240817 and bzip2 1.0.8-r5 and could not.
Maybe this bug can be closed?
Comment 4 Sergey Ilinykh 2024-09-22 19:57:07 UTC 
sure, let'c close.