[ebuild U ] dev-java/snakeyaml-1.11 [1.9] !!! Multiple package instances within a single package slot have been pulled !!! into the dependency graph, resulting in a slot conflict: dev-java/bcmail:0 (dev-java/bcmail-1.49::gentoo, installed) pulled in by (no parents that aren't satisfied by other packages in this slot) (dev-java/bcmail-1.38-r1::gentoo, ebuild scheduled for merge) pulled in by =dev-java/bcmail-1.38*:0 required by (dev-java/pdfbox-0.7.3-r2::gentoo, installed) dev-java/bcprov:0 (dev-java/bcprov-1.49-r2::gentoo, installed) pulled in by >=dev-java/bcprov-1.49-r2:0[test?] required by (dev-java/bcmail-1.49::gentoo, installed) ~dev-java/bcprov-1.49-r2:0[test?] required by (dev-java/bcpkix-1.49-r1::gentoo, installed) (dev-java/bcprov-1.38-r2::gentoo, ebuild scheduled for merge) pulled in by ~dev-java/bcprov-1.38:0 required by (dev-java/bcmail-1.38-r1::gentoo, ebuild scheduled for merge) dev-util/mdds:0 (dev-util/mdds-0.9.0::gentoo, ebuild scheduled for merge) pulled in by (no parents that aren't satisfied by other packages in this slot) (dev-util/mdds-0.8.1::gentoo, ebuild scheduled for merge) pulled in by =dev-util/mdds-0.8*:0/0.8.1= required by (app-office/libreoffice-4.1.0.2::gentoo, installed) (and 1 more with the same problem) Reproducible: Always Portage 2.1.12.13 (default/linux/amd64/13.0/desktop, gcc-4.7.3, glibc-2.17, 3.10.0-gentoo x86_64) ================================================================= System uname: Linux-3.10.0-gentoo-x86_64-Intel-R-_Core-TM-_i7-3740QM_CPU_@_2.70GHz-with-gentoo-2.2 KiB Mem: 24627356 total, 21953620 free KiB Swap: 25081852 total, 25081852 free Timestamp of tree: Fri, 12 Jul 2013 22:00:01 +0000 ld GNU ld (GNU Binutils) 2.23.1 app-shells/bash: 4.2_p45 dev-java/java-config: 2.2.0 dev-lang/python: 2.7.5, 3.2.5-r1, 3.3.2-r1 dev-util/cmake: 2.8.11.1 dev-util/pkgconfig: 0.28 sys-apps/baselayout: 2.2 sys-apps/openrc: 0.11.8 sys-apps/sandbox: 2.6-r1 sys-devel/autoconf: 2.13, 2.69 sys-devel/automake: 1.10.3, 1.11.6, 1.13.4, 1.14 sys-devel/binutils: 2.23.1 sys-devel/gcc: 4.7.3 sys-devel/gcc-config: 1.8 sys-devel/libtool: 2.4.2 sys-devel/make: 3.82-r5::gnome sys-kernel/linux-headers: 3.9 (virtual/os-headers) sys-libs/glibc: 2.17 Repositories: gentoo nikai mgorny poly-c luman qt Techwolf gamerlay scarabeus science mva emacs flameeyes-overlay mpd wirelay gnome ruby alice lokal ACCEPT_KEYWORDS="amd64 ~amd64" ACCEPT_LICENSE="*" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-march=corei7 -O2 -pipe" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /etc/X11/Sessions/awesome /etc/X11/Sessions/dwm /etc/conf.d/consolefont /etc/conf.d/hostname /etc/conf.d/hwclock /etc/conf.d/keymaps /etc/default/grub /etc/eix-sync.conf /etc/fstab /etc/hosts /etc/locale.gen /etc/make.conf /etc/timezone /usr/share/gnupg/qualified.txt" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php5.5/ext-active/ /etc/php/cgi-php5.5/ext-active/ /etc/php/cli-php5.5/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c" CXXFLAGS="-march=corei7 -O2 -pipe" DISTDIR="/usr/portage/distfiles" FCFLAGS="-O2 -pipe" FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch" FFLAGS="-O2 -pipe" GENTOO_MIRRORS="http://distfiles.gentoo.org" LANG="de_DE.UTF-8" LC_ALL="" LDFLAGS="-Wl,-O1 -Wl,--as-needed" MAKEOPTS="-j9" PKGDIR="/usr/portage/packages"
How is the Gnome overlay relevant? Can you also please post the full output?
here is the full output: * IMPORTANT: 1 news items need reading for repository 'gentoo'. * Use eselect news to read news items. [ebuild rR ] dev-util/mdds-0.8.1 [nomerge ] app-text/texlive-2012 [nomerge ] dev-tex/pdfannotextractor-0.1l [nomerge ] dev-java/pdfbox-0.7.3-r2 [ebuild UD] dev-java/bcmail-1.38-r1 [1.49] [ebuild NS ] dev-java/bcprov-1.40 [1.49-r2] [nomerge ] media-video/openshot-1.4.3 [ebuild U ] media-libs/mlt-0.9.0 [0.8.8] [nomerge ] games-rpg/bastion-20120620-r1 [ebuild NS ] media-libs/sdl-ttf-2.0.11 [2.0.12_pre242] [ebuild rR ] dev-libs/liborcus-0.5.1 [ebuild U ] app-misc/mc-4.8.9 [4.8.8-r2] [ebuild U ] app-emulation/winetricks-20130707 [20130629] [ebuild U ] app-emulation/wine-1.6_rc5 [1.6_rc4] [nomerge ] games-rpg/bastion-20120620-r1 [ebuild NS ] media-libs/sdl-image-1.2.12 [2.0.0_pre407] [ebuild U ] net-print/cups-1.6.3-r1 [1.6.2-r5] [ebuild r U ] dev-util/mdds-0.9.0 [0.8.1] [nomerge ] dev-db/postgresql-server-9.2.4 [ebuild U ] dev-libs/libxml2-2.9.1-r1 [2.9.1] [nomerge ] dev-java/bcmail-1.38-r1 [1.49] [ebuild UD] dev-java/bcprov-1.38-r2 [1.49-r2] [nomerge ] app-text/texlive-2012 [nomerge ] dev-texlive/texlive-context-2012-r1 [nomerge ] dev-lang/ruby-2.0.0_p247 [nomerge ] dev-ruby/rdoc-4.0.1 [nomerge ] dev-java/jruby-1.6.8 [ebuild U ] dev-java/jgrapht-0.8.3 [0.8.2] [ebuild U ] dev-java/jnr-constants-0.8.4 [0.8.3] [nomerge ] net-p2p/deluge-1.3.6 [nomerge ] dev-python/twisted-web-13.0.0 [nomerge ] dev-python/twisted-13.0.0 [nomerge ] net-zope/zope-interface-4.0.5 [ebuild U ] dev-lang/python-2.7.5-r1 [2.7.5] [nomerge ] x11-misc/shutter-0.90 [nomerge ] gnome-extra/gnome-web-photo-0.10.6 [nomerge ] net-libs/webkit-gtk-1.11.90-r300 [nomerge ] virtual/rubygems-4 [nomerge ] dev-lang/ruby-1.9.3_p448 [nomerge ] dev-ruby/rdoc-4.0.1 [nomerge ] virtual/rubygems-2 [nomerge ] dev-java/jruby-1.6.8 [ebuild U ] dev-java/snakeyaml-1.11 [1.9] !!! Multiple package instances within a single package slot have been pulled !!! into the dependency graph, resulting in a slot conflict: dev-java/bcmail:0 (dev-java/bcmail-1.49::gentoo, installed) pulled in by (no parents that aren't satisfied by other packages in this slot) (dev-java/bcmail-1.38-r1::gentoo, ebuild scheduled for merge) pulled in by =dev-java/bcmail-1.38*:0 required by (dev-java/pdfbox-0.7.3-r2::gentoo, installed) dev-java/bcprov:0 (dev-java/bcprov-1.49-r2::gentoo, installed) pulled in by >=dev-java/bcprov-1.49-r2:0[test?] required by (dev-java/bcmail-1.49::gentoo, installed) ~dev-java/bcprov-1.49-r2:0[test?] required by (dev-java/bcpkix-1.49-r1::gentoo, installed) (dev-java/bcprov-1.38-r2::gentoo, ebuild scheduled for merge) pulled in by ~dev-java/bcprov-1.38:0 required by (dev-java/bcmail-1.38-r1::gentoo, ebuild scheduled for merge) dev-util/mdds:0 (dev-util/mdds-0.9.0::gentoo, ebuild scheduled for merge) pulled in by (no parents that aren't satisfied by other packages in this slot) (dev-util/mdds-0.8.1::gentoo, ebuild scheduled for merge) pulled in by =dev-util/mdds-0.8*:0/0.8.1= required by (app-office/libreoffice-4.1.0.2::gentoo, installed) (and 1 more with the same problem) system updated
and its still not fixed.. and the update lists grews :)) * IMPORTANT: 1 news items need reading for repository 'gentoo'. * Use eselect news to read news items. [nomerge ] x11-misc/shutter-0.90 [nomerge ] gnome-extra/gnome-web-photo-0.10.6 [ebuild U ] net-libs/webkit-gtk-1.11.90-r300 [1.10.2-r300] [nomerge ] app-text/goldendict-1.0.1 [ebuild U ] dev-qt/qtphonon-4.8.5 [4.8.4] [nomerge ] media-video/dvdrip-0.98.11-r1 [ebuild U ] media-video/transcode-1.1.7-r3 [1.1.7-r2] [nomerge ] xfce-base/xfce4-meta-4.10 [nomerge ] xfce-base/xfdesktop-4.10.2 [nomerge ] xfce-base/thunar-1.6.3 [nomerge ] gnome-base/gvfs-1.15.4 [ebuild R ] sys-fs/udisks-2.1.0 [ebuild U ] app-office/texstudio-2.6.2 [2.6.0] [nomerge ] virtual/shadow-0 [nomerge ] sys-apps/shadow-4.1.5.1-r1 [nomerge ] sys-auth/pambase-20120417-r2 [ebuild U ] sys-auth/consolekit-0.4.6 [0.4.5_p20120320-r2] [ebuild U ] dev-lang/php-5.5.1 [5.5.0] [nomerge ] xfce-base/xfce4-meta-4.10 [nomerge ] xfce-base/xfce4-session-4.10.1 [nomerge ] sys-power/upower-0.9.20-r2 [nomerge ] sys-power/pm-utils-1.4.1-r2 [ebuild U ] media-sound/alsa-utils-1.0.27.2 [1.0.27.1-r1] [nomerge ] games-simulation/openttd-1.3.1 [ebuild U ] games-misc/opengfx-0.4.7 [0.4.6.1] [nomerge ] app-text/goldendict-1.0.1 [ebuild U ] dev-qt/qtwebkit-4.8.5 [4.8.4] [nomerge ] net-news/liferea-1.10.0 [ebuild U ] dev-libs/json-glib-0.16.0-r1 [0.16.0] [nomerge ] x11-misc/shutter-0.90 [ebuild U ] dev-perl/Proc-ProcessTable-0.480.0 [0.460.0] [nomerge ] app-text/jpdftweak-0.9 [nomerge ] dev-java/itext-2.1.5-r1 [ebuild U ] dev-java/bcmail-1.49 [1.38-r1] [ebuild rR ] dev-libs/liborcus-0.5.1 [ebuild U ] x11-misc/parcellite-1.1.5 [1.1.4] [ebuild U ] sys-boot/os-prober-1.62 [1.57-r1] [ebuild U ] x11-misc/gcolor2-0.4-r4 [0.4-r3] [ebuild U ] net-misc/dhcpcd-6.0.3 [6.0.2] [ebuild U ] sys-fs/dosfstools-3.0.22 [3.0.21] [ebuild U ] sys-boot/grub-2.00-r4 [2.00-r3] [ebuild U ] sys-devel/llvm-3.3-r1 [3.3] [nomerge ] net-news/liferea-1.10.0 [nomerge ] net-libs/webkit-gtk-1.11.90-r300 [1.10.2-r300] [ebuild N ] app-crypt/libsecret-0.15 [nomerge ] app-office/texstudio-2.6.2 [2.6.0] [ebuild N ] dev-qt/designer-5.1.0 [ebuild N ] dev-qt/qtxml-5.1.0 [ebuild N ] dev-qt/qtprintsupport-5.1.0 [nomerge ] media-sound/skype-call-recorder-0.8 [ebuild U ] dev-qt/qtdbus-4.8.5 [4.8.4] [nomerge ] media-video/openshot-1.4.3 [nomerge ] media-libs/mlt-0.9.0 [nomerge ] media-plugins/frei0r-plugins-1.3 [nomerge ] media-libs/opencv-2.4.5 [ebuild U ] dev-qt/qtopengl-4.8.5 [4.8.4] [nomerge ] dev-util/geany-plugins-1.23 [nomerge ] net-libs/libsoup-2.40.3 [nomerge ] net-libs/glib-networking-2.35.9 [nomerge ] net-libs/libproxy-0.4.11-r1 [nomerge ] net-libs/webkit-gtk-1.11.90-r300 [1.10.2-r300] [ebuild N ] media-libs/libwebp-0.3.1 [nomerge ] dev-java/bcmail-1.49 [1.38-r1] [ebuild N ] dev-java/bcpkix-1.49-r1 [ebuild rR ] dev-util/mdds-0.8.1 [ebuild r U ] dev-util/mdds-0.9.0 [0.8.1] [nomerge ] media-fonts/font-adobe-utopia-type1-1.0.4 [ebuild U ] x11-apps/mkfontscale-1.1.1 [1.1.0] [nomerge ] x11-wm/awesome-9999 [nomerge ] dev-vcs/git-1.8.3.2 [nomerge ] dev-vcs/subversion-1.8.0_pre [ebuild U ] dev-libs/apr-1.4.8-r1 [1.4.8] [nomerge ] dev-java/bcmail-1.49 [1.38-r1] [ebuild U ] dev-java/bcprov-1.49-r2 [1.38-r2] [nomerge ] app-office/texstudio-2.6.2 [2.6.0] [nomerge ] dev-qt/qtgui-4.8.5 [4.8.4-r1] [ebuild U ] dev-qt/qt3support-4.8.5 [4.8.4] [ebuild U ] dev-qt/qtsql-4.8.5 [4.8.4] [nomerge ] dev-qt/qtwebkit-4.8.5 [4.8.4] [ebuild U ] dev-qt/qtxmlpatterns-4.8.5 [4.8.4] [nomerge ] media-libs/opencv-2.4.5 [ebuild U ] dev-qt/qttest-4.8.5 [4.8.4] [nomerge ] net-wireless/wpa_supplicant-2.0-r2 [ebuild U ] dev-qt/qtsvg-4.8.5 [4.8.4] [ebuild U ] dev-qt/qtgui-4.8.5 [4.8.4-r1] [ebuild U ] dev-qt/qtscript-4.8.5 [4.8.4] [ebuild U ] dev-qt/qtcore-4.8.5 [4.8.4-r5] [ebuild U ] media-libs/libpng-1.6.3 [1.6.2] [nomerge ] sys-devel/llvm-3.3-r1 [3.3] [ebuild U ] virtual/libffi-3.0.13-r1 [3.0.11] [ebuild U ] dev-libs/libffi-3.0.13-r1 [3.0.13] [blocks B ] <=app-emulation/emul-linux-x86-baselibs-20130224 ("<=app-emulation/emul-linux-x86-baselibs-20130224" is blocking sys-devel/llvm-3.3-r1) [blocks B ] app-emulation/emul-linux-x86-baselibs[-abi_x86_32(-)] ("app-emulation/emul-linux-x86-baselibs[-abi_x86_32(-)]" is blocking sys-devel/llvm-3.3-r1) !!! Multiple package instances within a single package slot have been pulled !!! into the dependency graph, resulting in a slot conflict: dev-util/mdds:0 (dev-util/mdds-0.9.0::gentoo, ebuild scheduled for merge) pulled in by (no parents that aren't satisfied by other packages in this slot) (dev-util/mdds-0.8.1::gentoo, ebuild scheduled for merge) pulled in by >=dev-util/mdds-0.7.1:0/0.8.1= required by (dev-libs/libixion-0.5.0::gentoo, installed) =dev-util/mdds-0.8*:0/0.8.1= required by (app-office/libreoffice-4.1.0.2::gentoo, installed) (and 1 more with the same problems) dev-java/bcmail:0 (dev-java/bcmail-1.49::gentoo, ebuild scheduled for merge) pulled in by (no parents that aren't satisfied by other packages in this slot) (dev-java/bcmail-1.38-r1::gentoo, installed) pulled in by =dev-java/bcmail-1.38*:0 required by (dev-java/pdfbox-0.7.3-r2::gentoo, installed) dev-java/bcprov:0 (dev-java/bcprov-1.38-r2::gentoo, installed) pulled in by ~dev-java/bcprov-1.38:0 required by (dev-java/bcmail-1.38-r1::gentoo, installed) (dev-java/bcprov-1.49-r2::gentoo, ebuild scheduled for merge) pulled in by ~dev-java/bcprov-1.49-r2:0[test?] required by (dev-java/bcpkix-1.49-r1::gentoo, ebuild scheduled for merge) >=dev-java/bcprov-1.49-r2:0[test?] required by (dev-java/bcmail-1.49::gentoo, ebuild scheduled for merge) virtual/libffi:0 (virtual/libffi-3.0.11::gentoo, installed) pulled in by =virtual/libffi-3.0.11 required by (dev-lua/lgi-0.6.2-r1::gentoo, installed) (and 12 more with the same problem) (virtual/libffi-3.0.13-r1::gentoo, ebuild scheduled for merge) pulled in by virtual/libffi[abi_x86_32(-)?,abi_x86_64(-)?,abi_x86_x32(-)?] required by (sys-devel/llvm-3.3-r1::mgorny, ebuild scheduled for merge) dev-libs/libffi:0 (dev-libs/libffi-3.0.13::gentoo, installed) pulled in by (no parents that aren't satisfied by other packages in this slot) (dev-libs/libffi-3.0.13-r1::gentoo, ebuild scheduled for merge) pulled in by >=dev-libs/libffi-3.0.13-r1[abi_x86_32(-)?,abi_x86_64(-)?,abi_x86_x32(-)?] required by (virtual/libffi-3.0.13-r1::gentoo, ebuild scheduled for merge) * Error: The above package list contains packages which cannot be * installed at the same time on the same system. (sys-devel/llvm-3.3-r1::mgorny, ebuild scheduled for merge) pulled in by sys-devel/llvm required by @selected >=sys-devel/llvm-2.9 required by (media-libs/mesa-9.1.4::gentoo, installed) (app-emulation/emul-linux-x86-baselibs-20130224::gentoo, installed) pulled in by ~app-emulation/emul-linux-x86-baselibs-20130224 required by (app-emulation/emul-linux-x86-xlibs-20130224-r1::gentoo, installed) ~app-emulation/emul-linux-x86-baselibs-20130224 required by (app-emulation/emul-linux-x86-db-20130224::gentoo, installed) ~app-emulation/emul-linux-x86-baselibs-20130224 required by (app-emulation/emul-linux-x86-soundlibs-20130224-r4::gentoo, installed) app-emulation/emul-linux-x86-baselibs[development] required by (x11-libs/libpciaccess-0.13.1-r1::gentoo, installed) ~app-emulation/emul-linux-x86-baselibs-20130224 required by (app-emulation/emul-linux-x86-medialibs-20130224-r2::gentoo, installed) ~app-emulation/emul-linux-x86-baselibs-20130224 required by (app-emulation/emul-linux-x86-sdl-20130224::gentoo, installed) app-emulation/emul-linux-x86-baselibs required by (media-libs/freetype-2.4.12::gentoo, installed) app-emulation/emul-linux-x86-baselibs[development] required by (media-libs/fontconfig-2.10.2-r1::gentoo, installed) app-emulation/emul-linux-x86-baselibs required by (x11-misc/virtualgl-2.3.2-r3::gentoo, installed) app-emulation/emul-linux-x86-baselibs required by (app-text/acroread-9.5.5::gentoo, installed) app-emulation/emul-linux-x86-baselibs[development] required by (x11-libs/libSM-1.2.1-r1::gentoo, installed) app-emulation/emul-linux-x86-baselibs required by (media-libs/jasper-1.900.1-r6::gentoo, installed) ~app-emulation/emul-linux-x86-baselibs-20130224 required by (app-emulation/emul-linux-x86-qtlibs-20130224::gentoo, installed) app-emulation/emul-linux-x86-baselibs required by (net-misc/teamviewer-8.0.17147-r2::gentoo, installed) ~app-emulation/emul-linux-x86-baselibs-20130224 required by (app-emulation/emul-linux-x86-gtklibs-20130224::gentoo, installed) >=app-emulation/emul-linux-x86-baselibs-20120520 required by (net-im/skype-4.2.0.11::gentoo, installed) The following mask changes are necessary to proceed: (see "package.unmask" in the portage(5) man page for more details) # required by virtual/libffi-3.0.13-r1 # required by sys-devel/llvm-3.3-r1::mgorny[libffi] # required by @selected # required by @world (argument) # /usr/portage/profiles/package.mask: # Pacho Ramos <pacho@gentoo.org> (23 Jun 2013) # Mask for packages currently included in emul-linux-x86-baselibs # that are incorporating native multilib support. =dev-libs/libffi-3.0.13-r1 # required by dev-python/pygobject-3.4.2-r1 # required by dev-libs/libpeas-1.6.2-r1[python] # required by net-news/liferea-1.10.0 # required by @selected # required by @world (argument) # /usr/portage/profiles/package.mask: # Pacho Ramos <pacho@gentoo.org> (23 Jun 2013) # Mask for packages currently included in emul-linux-x86-baselibs # that are incorporating native multilib support. =virtual/libffi-3.0.13-r1 Use --autounmask-write to write changes to config files (honoring CONFIG_PROTECT). Carefully examine the list of proposed changes, paying special attention to mask or keyword changes that may expose experimental or unstable packages.
> [nomerge ] dev-java/bcmail-1.49 [1.38-r1] > [ebuild N ] dev-java/bcpkix-1.49-r1 > [ebuild U ] dev-java/bcprov-1.49-r2 [1.38-r2] Looks fine, not our problem as it shows up proper; you need to fix the blockers: > [blocks B ] <=app-emulation/emul-linux-x86-baselibs-20130224 ("<=app-emulation/emul-linux-x86-baselibs-20130224" is blocking sys-devel/llvm-3.3-r1) > [blocks B ] app-emulation/emul-linux-x86-baselibs[-abi_x86_32(-)] ("app-emulation/emul-linux-x86-baselibs[-abi_x86_32(-)]" is blocking sys-devel/llvm-3.3-r1)
(In reply to Tom Wijsman (TomWij) from comment #4) > > [nomerge ] dev-java/bcmail-1.49 [1.38-r1] > > [ebuild N ] dev-java/bcpkix-1.49-r1 > > [ebuild U ] dev-java/bcprov-1.49-r2 [1.38-r2] > > Looks fine, not our problem as it shows up proper; you need to fix the > blockers: > > > [blocks B ] <=app-emulation/emul-linux-x86-baselibs-20130224 ("<=app-emulation/emul-linux-x86-baselibs-20130224" is blocking sys-devel/llvm-3.3-r1) > > [blocks B ] app-emulation/emul-linux-x86-baselibs[-abi_x86_32(-)] ("app-emulation/emul-linux-x86-baselibs[-abi_x86_32(-)]" is blocking sys-devel/llvm-3.3-r1) ok there is no blockers anymore. but its still not fixed in portage main tree. [nomerge ] dev-util/geany-plugins-1.23 [nomerge ] net-libs/libsoup-2.42.2 [ebuild U ] net-libs/glib-networking-2.36.2 [2.35.9] [nomerge ] app-office/texstudio-2.6.2 [ebuild NS ] dev-qt/designer-4.8.5 [5.1.0] [nomerge ] net-misc/remmina-1.0.0_p20130723 [ebuild U ] x11-libs/vte-0.34.7 [0.34.2] [ebuild U ] net-libs/telepathy-glib-0.20.4 [0.20.3] [nomerge ] xfce-base/xfce4-meta-4.10 [nomerge ] xfce-base/xfce4-session-4.10.1 [ebuild U ] sys-power/upower-0.9.21 [0.9.20-r2] [nomerge ] games-simulation/openttd-1.3.1 [ebuild U ] games-misc/opengfx-0.4.7 [0.4.6.1] [nomerge ] app-text/texlive-2012 [nomerge ] dev-tex/pdfannotextractor-0.1l [ebuild N ] dev-java/pdfbox-0.7.3-r2 [nomerge ] app-text/texlive-2012 [nomerge ] app-text/xindy-2.4 [nomerge ] dev-lisp/clisp-2.49-r7 [ebuild U ] x11-misc/imake-1.0.6 [1.0.5] [nomerge ] net-news/liferea-1.10.0 [ebuild U ] dev-libs/libpeas-1.8.1 [1.6.2-r1] [nomerge ] sys-block/gparted-0.16.1 [ebuild U ] sys-fs/btrfs-progs-0.20_rc1_p358 [0.20_rc1_p56] [nomerge ] media-sound/pavucontrol-2.0 [ebuild U ] dev-cpp/gtkmm-3.8.1 [3.6.0] [nomerge ] media-gfx/hugin-2012.0.0 [nomerge ] media-gfx/enblend-4.1.1 [ebuild U ] media-libs/glew-1.10.0-r1 [1.10.0] [nomerge ] media-sound/grip-3.3.1-r3 [nomerge ] gnome-base/libgnomeui-2.24.5 [ebuild U ] x11-themes/gnome-icon-theme-3.8.2 [3.6.2] [ebuild R ] x11-misc/bumblebee-3.2.1 [ebuild U ] app-office/libreoffice-4.1.0.4 [4.1.0.2] [nomerge ] x11-misc/shutter-0.90 [nomerge ] dev-perl/gnome2-perl-1.42.0 [nomerge ] gnome-base/libgnomeui-2.24.5 [nomerge ] gnome-base/gnome-keyring-3.8.2 [3.6.3] [ebuild U ] gnome-base/libgnome-keyring-3.8.0 [3.6.0] [ebuild U ] gnome-base/gnome-keyring-3.8.2 [3.6.3] [nomerge ] media-video/libav-9.8 [nomerge ] x11-libs/libva-1.1.1 [ebuild N ] x11-libs/libva-vdpau-driver-0.7.4 [ebuild R ] x11-libs/libva-1.1.1 [nomerge ] gnome-base/gnome-keyring-3.8.2 [3.6.3] [ebuild U ] app-crypt/gcr-3.8.2 [3.6.2] [nomerge ] dev-lang/php-5.5.1-r1 [ebuild U ] app-admin/eselect-php-0.7.1-r2 [0.7.1-r1] [ebuild UD] dev-java/bcmail-1.38-r1 [1.49] [nomerge ] x11-misc/bumblebee-3.2.1 [nomerge ] x11-base/xorg-drivers-1.14 [nomerge ] x11-drivers/xf86-video-intel-2.21.12 [nomerge ] x11-base/xorg-server-1.14.2 [ebuild U ] x11-apps/iceauth-1.0.6 [1.0.5] [nomerge ] dev-java/bcmail-1.38-r1 [1.49] [ebuild UD] dev-java/bcprov-1.38-r2 [1.49-r2] [nomerge ] app-i18n/ibus-1.5.2 [ebuild U ] dev-python/pygobject-3.8.3 [3.4.2-r1] [nomerge ] sys-block/gparted-0.16.1 [nomerge ] dev-cpp/gtkmm-2.24.4 [ebuild U ] dev-cpp/pangomm-2.34.0 [2.28.4] [nomerge ] net-news/liferea-1.10.0 [ebuild U ] gnome-base/gsettings-desktop-schemas-3.8.2 [3.6.1] [nomerge ] x11-misc/shutter-0.90 [nomerge ] gnome-extra/gnome-web-photo-0.10.6 [nomerge ] net-libs/webkit-gtk-2.0.4 [nomerge ] app-misc/geoclue-0.12.99 [nomerge ] dev-util/gtk-doc-1.19 [nomerge ] app-text/yelp-tools-3.6.1 [ebuild U ] gnome-extra/yelp-xsl-3.8.1 [3.6.1] [nomerge ] games-simulation/openttd-1.3.1 [ebuild UD] dev-libs/icu-51.1 [51.2] [nomerge ] app-crypt/gcr-3.8.2 [3.6.2] [ebuild U ] app-crypt/p11-kit-0.19.3 [0.18.4] [ebuild U ] dev-util/gdbus-codegen-2.36.3 [2.34.3] [nomerge ] x11-terms/xterm-293 [nomerge ] media-fonts/font-misc-misc-1.1.2 [nomerge ] x11-apps/bdftopcf-1.0.4 [ebuild U ] x11-libs/libXfont-1.4.6 [1.4.5-r1] [nomerge ] x11-drivers/xf86-input-wacom-0.20.0 [nomerge ] x11-base/xorg-server-1.14.2 [nomerge ] x11-base/xorg-drivers-1.14 [ebuild N ] x11-drivers/nvidia-drivers-325.08 [ebuild N ] app-admin/eselect-opencl-1.1.0-r1 [ebuild R ] x11-base/xorg-drivers-1.14 [nomerge ] media-sound/pavumeter-0.9.3-r1 [nomerge ] dev-cpp/gtkmm-2.24.4 [ebuild U ] dev-cpp/atkmm-2.22.7 [2.22.6] [nomerge ] media-gfx/enblend-4.1.1 [ebuild U ] media-libs/openexr-2.0.1 [2.0.0] [nomerge ] x11-drivers/nvidia-drivers-325.08 [ebuild N ] sys-power/acpid-2.0.19 [nomerge ] media-gfx/inkscape-0.48.4-r1 [ebuild U ] dev-cpp/glibmm-2.36.2 [2.34.1] [nomerge ] media-sound/grip-3.3.1-r3 [nomerge ] x11-libs/vte-0.28.2-r206 [ebuild U ] x11-libs/gnome-pty-helper-0.34.7 [0.34.2] [nomerge ] sys-fs/btrfs-progs-0.20_rc1_p358 [0.20_rc1_p56] [ebuild N ] dev-libs/lzo-2.06 [nomerge ] media-gfx/hugin-2012.0.0 [nomerge ] media-libs/openexr-2.0.1 [2.0.0] [ebuild U ] media-libs/ilmbase-2.0.1 [2.0.0] [nomerge ] x11-misc/shutter-0.90 [nomerge ] dev-perl/Gtk2-ImageView-0.50.0 [nomerge ] media-gfx/gtkimageview-1.6.4 [ebuild U ] gnome-base/gnome-common-3.7.4 [3.6.0] !!! Multiple package instances within a single package slot have been pulled !!! into the dependency graph, resulting in a slot conflict: dev-libs/icu:0 (dev-libs/icu-51.1::gentoo, ebuild scheduled for merge) pulled in by dev-libs/icu:0/51.1= required by (games-simulation/openttd-1.3.1::gentoo, installed) dev-libs/icu:0/51.1= required by (dev-qt/qtwebkit-4.8.5::gentoo, installed) dev-libs/icu:0/51.1= required by (sys-apps/gptfdisk-0.8.6::gentoo, installed) (dev-libs/icu-51.2::gentoo, installed) pulled in by dev-libs/icu:0/51.2= required by (dev-db/sqlite-3.7.17::gentoo, installed) dev-libs/icu:0/51.2= required by (media-libs/libvisio-0.0.30::gentoo, installed) dev-libs/icu:0/51.2= required by (dev-libs/libxml2-2.9.1-r1::gentoo, installed) dev-libs/icu:0/51.2= required by (media-libs/libcdr-0.0.14::gentoo, installed) dev-libs/icu:0/51.2= required by (app-text/libmspub-0.0.6::gentoo, installed) >=dev-libs/icu-49:0/51.2= required by (dev-qt/qtcore-4.8.5::gentoo, installed) dev-libs/icu:0/51.2= required by (media-libs/raptor-2.0.9::gentoo, installed) dev-libs/icu:0/51.2= required by (media-libs/harfbuzz-0.9.18-r1::gentoo, installed) (and 2 more with the same problems) dev-java/bcmail:0 (dev-java/bcmail-1.49::gentoo, installed) pulled in by (no parents that aren't satisfied by other packages in this slot) (dev-java/bcmail-1.38-r1::gentoo, ebuild scheduled for merge) pulled in by =dev-java/bcmail-1.38*:0 required by (dev-java/pdfbox-0.7.3-r2::gentoo, ebuild scheduled for merge) dev-java/bcprov:0 (dev-java/bcprov-1.49-r2::gentoo, installed) pulled in by >=dev-java/bcprov-1.49-r2:0[test?] required by (dev-java/bcmail-1.49::gentoo, installed) ~dev-java/bcprov-1.49-r2:0[test?] required by (dev-java/bcpkix-1.49-r1::gentoo, installed) (dev-java/bcprov-1.38-r2::gentoo, ebuild scheduled for merge) pulled in by ~dev-java/bcprov-1.38:0 required by (dev-java/bcmail-1.38-r1::gentoo, ebuild scheduled for merge)
!!! Multiple package instances within a single package slot have been pulled !!! into the dependency graph, resulting in a slot conflict: dev-java/bcmail:0 (dev-java/bcmail-1.49::gentoo, installed) pulled in by (no parents that aren't satisfied by other packages in this slot) (dev-java/bcmail-1.38-r1::gentoo, ebuild scheduled for merge) pulled in by =dev-java/bcmail-1.38*:0 required by (dev-java/pdfbox-0.7.3-r2::gentoo, ebuild scheduled for merge) dev-java/bcprov:0 (dev-java/bcprov-1.49-r2::gentoo, installed) pulled in by >=dev-java/bcprov-1.49-r2:0[test?] required by (dev-java/bcmail-1.49::gentoo, installed) ~dev-java/bcprov-1.49-r2:0[test?] required by (dev-java/bcpkix-1.49-r1::gentoo, installed) (dev-java/bcprov-1.38-r2::gentoo, ebuild scheduled for merge) pulled in by ~dev-java/bcprov-1.38:0 required by (dev-java/bcmail-1.38-r1::gentoo, ebuild scheduled for merge) media-libs/x264:0 (media-libs/x264-0.0.20130506::gentoo, installed) pulled in by >=media-libs/x264-0.0.20111017:0/132= required by (media-video/libav-9.8::gentoo, installed) (media-libs/x264-0.0.20130731::gentoo, ebuild scheduled for merge) pulled in by >=media-libs/x264-0.0.20130731[abi_x86_32(-)] required by (app-emulation/emul-linux-x86-medialibs-20130224-r8::gentoo, ebuild scheduled for merge) system updated
Have some hours to get dev-java/bcmail and dev-java/bcprov right. Thank you very much for reporting!
You won't see this until bug #481184 gets resolved though. Reopened. As a reminder to myself: Remove SLOT="1.3" from dev-java/bcprov upon resolution.
Done. Thanks again. :)