Created attachment 352900 [details] build.log Compiling rstudio with GENTOO_VM=oracle-jdk-bin-1.7 it fails with: [ 91%] Building CXX object src/cpp/session/CMakeFiles/rsession.dir/modules/SessionSource.cpp.o cd /var/tmp/portage/sci-mathematics/rstudio-0.97.336/work/rstudio-0.97.336_build/src/cpp/session && /usr/lib64/ccache/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ASIO_DISABLE_KQUEUE -DBOOST_ENABLE_ASSERT_HANDLER -D_FORTIFY_SOURCE=2 -DNDEBUG -march=native -O2 -pipe -fomit-frame-pointer -I/var/tmp/portage/sci-mathematics/rstudio-0.97.336/work/rstudio-0.97.336/src/cpp/session/include -I/usr/lib64/R/include -I/var/tmp/portage/sci-mathematics/rstudio-0.97.336/work/rstudio-0.97.336/src/cpp/core/include -I/var/tmp/portage/sci-mathematics/rstudio-0.97.336/work/rstudio-0.97.336/src/cpp/r/include -I/var/tmp/portage/sci-mathematics/rstudio-0.97.336/work/rstudio-0.97.336_build/src/cpp/session -Wall -pthread -Wformat -Wformat-security -fstack-protector --param ssp-buffer-size=4 -pie -fPIE -o CMakeFiles/rsession.dir/modules/SessionSource.cpp.o -c /var/tmp/portage/sci-mathematics/rstudio-0.97.336/work/rstudio-0.97.336/src/cpp/session/modules/SessionSource.cpp <command-line>:0:0: warning: "_FORTIFY_SOURCE" redefined [enabled by default] /var/tmp/portage/sci-mathematics/rstudio-0.97.336/work/rstudio-0.97.336/src/cpp/session/modules/SessionPackages.cpp:1:0: note: this is the location of the previous definition In file included from /var/tmp/portage/sci-mathematics/rstudio-0.97.336/work/rstudio-0.97.336/src/cpp/core/include/core/http/TcpIpBlockingClient.hpp:22:0, from /var/tmp/portage/sci-mathematics/rstudio-0.97.336/work/rstudio-0.97.336/src/cpp/session/modules/SessionPackages.cpp:29: /var/tmp/portage/sci-mathematics/rstudio-0.97.336/work/rstudio-0.97.336/src/cpp/core/include/core/http/TcpIpAsyncClient.hpp: In member function ‘const boost::shared_ptr<core::http::TcpIpAsyncClient> core::http::TcpIpAsyncClient::sharedFromThis()’: /var/tmp/portage/sci-mathematics/rstudio-0.97.336/work/rstudio-0.97.336/src/cpp/core/include/core/http/TcpIpAsyncClient.hpp:77:14: error: ‘shared_static_cast’ is not a member of ‘boost’ /var/tmp/portage/sci-mathematics/rstudio-0.97.336/work/rstudio-0.97.336/src/cpp/core/include/core/http/TcpIpAsyncClient.hpp:77:56: error: expected primary-expression before ‘>’ token /var/tmp/portage/sci-mathematics/rstudio-0.97.336/work/rstudio-0.97.336/src/cpp/core/include/core/http/TcpIpAsyncClient.hpp:78:4: warning: control reaches end of non-void function [-Wreturn-type] make[2]: *** [src/cpp/session/CMakeFiles/rsession.dir/modules/SessionPackages.cpp.o] Errore 1 make[2]: *** Attesa dei processi non terminati.... <command-line>:0:0: warning: "_FORTIFY_SOURCE" redefined [enabled by default] /var/tmp/portage/sci-mathematics/rstudio-0.97.336/work/rstudio-0.97.336/src/cpp/session/modules/SessionPath.cpp:1:0: note: this is the location of the previous definition <command-line>:0:0: warning: "_FORTIFY_SOURCE" redefined [enabled by default] /var/tmp/portage/sci-mathematics/rstudio-0.97.336/work/rstudio-0.97.336/src/cpp/session/modules/SessionHelp.cpp:1:0: note: this is the location of the previous definition <command-line>:0:0: warning: "_FORTIFY_SOURCE" redefined [enabled by default] /var/tmp/portage/sci-mathematics/rstudio-0.97.336/work/rstudio-0.97.336/src/cpp/session/modules/SessionGit.cpp:1:0: note: this is the location of the previous definition <command-line>:0:0: warning: "_FORTIFY_SOURCE" redefined [enabled by default] /var/tmp/portage/sci-mathematics/rstudio-0.97.336/work/rstudio-0.97.336/src/cpp/session/modules/SessionHTMLPreview.cpp:1:0: note: this is the location of the previous definition <command-line>:0:0: warning: "_FORTIFY_SOURCE" redefined [enabled by default] /var/tmp/portage/sci-mathematics/rstudio-0.97.336/work/rstudio-0.97.336/src/cpp/session/modules/SessionRPubs.cpp:1:0: note: this is the location of the previous definition <command-line>:0:0: warning: "_FORTIFY_SOURCE" redefined [enabled by default] /var/tmp/portage/sci-mathematics/rstudio-0.97.336/work/rstudio-0.97.336/src/cpp/session/modules/SessionPlots.cpp:1:0: note: this is the location of the previous definition <command-line>:0:0: warning: "_FORTIFY_SOURCE" redefined [enabled by default] /var/tmp/portage/sci-mathematics/rstudio-0.97.336/work/rstudio-0.97.336/src/cpp/session/modules/SessionSource.cpp:1:0: note: this is the location of the previous definition make[2]: Leaving directory `/var/tmp/portage/sci-mathematics/rstudio-0.97.336/work/rstudio-0.97.336_build' make[1]: *** [src/cpp/session/CMakeFiles/rsession.dir/all] Errore 2 [java] Compiling 7 permutations [java] Compiling permutation 0... [java] Process output [java] Compiling [java] Compiling permutation 2... [java] Process output [java] Compiling [java] Compiling permutation 1... [java] Process output [java] Compiling [java] Compiling permutation 3... [java] Compiling permutation 4... [java] Compiling [java] Compiling permutation 5... [java] Compiling [java] Compiling permutation 6... [java] Compile of permutations succeeded [java] Linking into /var/tmp/portage/sci-mathematics/rstudio-0.97.336/work/rstudio-0.97.336/src/gwt/www/rstudio; Writing extras to /var/tmp/portage/sci-mathematics/rstudio-0.97.336/work/rstudio-0.97.336/src/gwt/extras/rstudio [java] Link succeeded [java] Compilation succeeded -- 161,550s build: BUILD SUCCESSFUL Total time: 3 minutes 18 seconds make[2]: Leaving directory `/var/tmp/portage/sci-mathematics/rstudio-0.97.336/work/rstudio-0.97.336_build' /usr/bin/cmake -E cmake_progress_report /var/tmp/portage/sci-mathematics/rstudio-0.97.336/work/rstudio-0.97.336_build/CMakeFiles [ 91%] Built target gwt_build make[1]: Leaving directory `/var/tmp/portage/sci-mathematics/rstudio-0.97.336/work/rstudio-0.97.336_build' make: *** [all] Errore 2 GENTOO_VM=oracle-jdk-bin-1.7 CLASSPATH="" JAVA_HOME="/opt/oracle-jdk-bin-1.7.0.25" JAVACFLAGS="-source 1.5 -target 1.5" COMPILER=""
emerge --info =rstudio-0.97.336 Portage 2.1.12.12 (default/linux/amd64/13.0/desktop/kde, gcc-4.7.3, glibc-2.17, 3.9.9-gentoo x86_64) ================================================================= System Settings ================================================================= System uname: Linux-3.9.9-gentoo-x86_64-Intel-R-_Core-TM-_i7-2630QM_CPU_@_2.00GHz-with-gentoo-2.2 KiB Mem: 16443244 total, 4178752 free KiB Swap: 0 total, 0 free Timestamp of tree: Mon, 08 Jul 2013 20:15:01 +0000 ld ld di GNU (GNU Binutils) 2.23.1 distcc 3.1 x86_64-pc-linux-gnu [disabled] ccache version 3.1.9 [enabled] app-shells/bash: 4.2_p45 dev-java/java-config: 2.2.0 dev-lang/python: 2.7.5, 3.2.5-r1, 3.3.2-r1 dev-util/ccache: 3.1.9 dev-util/cmake: 2.8.11.1 dev-util/pkgconfig: 0.28 sys-apps/baselayout: 2.2 sys-apps/openrc: 0.11.8 sys-apps/sandbox: 2.6-r1 sys-devel/autoconf: 2.13, 2.69 sys-devel/automake: 1.9.6-r3, 1.11.6, 1.12.6, 1.13.4, 1.14 sys-devel/binutils: 2.23.1 sys-devel/gcc: 4.6.4, 4.7.3 sys-devel/gcc-config: 1.8 sys-devel/libtool: 2.4.2 sys-devel/make: 3.82-r4 sys-kernel/linux-headers: 3.9 (virtual/os-headers) sys-libs/glibc: 2.17 Repositories: gentoo bangert yarik-overlay belak sunrise amielke-overlay maggu2810-overlay gamerlay nikai zugaina voyageur pentoo luman Techwolf pinkbyte manual bibletime ACCEPT_KEYWORDS="amd64 ~amd64" ACCEPT_LICENSE="*" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-march=native -O2 -pipe -fomit-frame-pointer" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/share/config /usr/share/gnupg/qualified.txt /usr/share/maven-bin-3.0/conf /usr/share/polkit-1/actions /var/lib/hsqldb" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c" CXXFLAGS="-march=native -O2 -pipe -fomit-frame-pointer" DISTDIR="/usr/portage/distfiles" FCFLAGS="-O2 -pipe" FEATURES="assume-digests binpkg-logs ccache config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch" FFLAGS="-O2 -pipe" GENTOO_MIRRORS=" http://mirror.ovh.net/gentoo-distfiles/ http://ftp.heanet.ie/pub/gentoo/ http://mirror.ovh.net/gentoo-distfiles/ http://www.die.unipd.it/pub/Linux/distributions/gentoo-sources/ rsync://rsync3.it.gentoo.org/gentoo-sources/ ftp://ftp.unina.it/pub/linux/distributions/gentoo/" LANG="it_IT.UTF-8" LDFLAGS="-Wl,-O1 -Wl,--as-needed" MAKEOPTS="-j9" PKGDIR="/usr/portage/packages" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages" PORTAGE_TMPDIR="/var/tmp" PORTDIR="/usr/portage" PORTDIR_OVERLAY="/var/lib/layman/bangert /var/lib/layman/yarik-overlay /var/lib/layman/belak /var/lib/layman/sunrise /var/lib/layman/amielke-overlay /var/lib/layman/maggu2810-overlay /var/lib/layman/gamerlay /var/lib/layman/nikai /var/lib/layman/zugaina /var/lib/layman/voyageur /var/lib/layman/pentoo /var/lib/layman/luman /var/lib/layman/techwolf /var/lib/layman/pinkbyte /usr/portage/local/manual /var/lib/layman/bibletime" SYNC="rsync://rsync.europe.gentoo.org/gentoo-portage" USE="3ds 64bit X a52 aac aalib acl acpi aiglx akode alias alsa amd64 amr ao apache apm apng audiofile autoreplace autotrace avahi avi bash-completion berkdb bitmap-fonts bluetooth bluray bmp branding browserplugin bzip bzip2 cairo cdaudio cdda cdr cli clucene connectionstatus consolekit contactnotes cracklib crypt cuda cups cvd cvs cxx dbus declarative dia dialup djvu dri dtmf dts dv dvd dvdr dvdread dvi dynamicplugin ebook efi emboss encode ethereal exif fam farstream fat ffmpeg firefox flac fluidsynth fontconfig foomaticdb fortran freetds frei0r gbm gdbm geolocation gif gimp git gles2 glib glitz gphoto2 gpm gps gpu groupwise gstreamer gtk gtk3 h323 highlight history hvm i8x0 iconv icu ieee1394 imagemagick innodb ios iphone ipod ipv6 irc ithreads jack java javascript jingle jpeg jpeg2k kde kdenlive kdepim kerberos kipi kontact kqemu lame laptop lcms ldap libkms libnotify lm_sensors lucene m4a mad marble mbrola mdb mdnsresponder-compat mercurial midi mime minizip mmx mmxext mng modules moonlight mozilla mp3 mp4 mpeg mpeg2 mplayer msn mssql mudflap multilib musepack musicbrainz mysql ncurses netmeeting nls nowlistening npt1 nptl nptlonly nsplugin ntfs nvidia odbc ogg openal openexr opengl openipmi openmp opus oss pam pango pcmcia pcre pda pdf perl phonon plasma pmu png policykit portaudio postgres ppds python python3 qemu qt qt3support qt4 quicktime rar raw rdesktop rdp readline reiserfs reports samba sametime sane scanner sdl semantic-desktop session sip sipim skype smp sms soundtouch speex spell sqlite sse sse2 ssh ssl ssse3 startup-notification subtitles subversion svg tcpd texteffect texteffects theora tidy tiff timidity tk tordns translator truetype truetype-fonts twolame type1-fonts udev udisks unicode upower usb utempter v4l v4l2 vcd vdpau video virtualbox vnc vorbis wav wavpack webkit webpresence wicd wifi win32codecs win64 winetriks winpopup wlm wmf wxwidgets wxwindows x264 xcb xcomposite xen xetex xine xinerama xml xscreensaver xv xvid xvmc yahoo zeroconf zlib" ABI_X86="64" ALSA_CARDS="snd_hda_intel" APACHE2_MODULES="actions alias auth_basic auth_digest authn_anon authn_dbd authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache dav dav_fs dav_lock dbd deflate dir disk_cache env expires ext_filter file_cache filter headers ident imagemap include info log_config logio mem_cache mime mime_magic negotiation proxy proxy_ajp proxy_balancer proxy_connect proxy_http rewrite setenvif so speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="canon" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ubx" INPUT_DEVICES="keyboard mouse evdev joystick synaptics wacom" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="it en it_IT" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-4" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_2" RUBY_TARGETS="ruby19 ruby18" SANE_BACKENDS="*" USERLAND="GNU" VIDEO_CARDS="nvidia nv vesa nouveau v4l v4l2" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" Unset: CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON ================================================================= Package Settings ================================================================= sci-mathematics/rstudio-0.97.336 was built with the following: USE="server -dedicated"
This seems to be a duplicate of Bug 476274. As far as I can see the error is caused by boost rather than by oracle-jdk-bin.
try with latest rstudio
